RNA–Protein interactions for RNA: ENST00000395892.5

CLIC1-209, Transcript of chloride intracellular channel 1, humanhuman

APPRIS P1 TSL 3 BASIC

Gene CLIC1, Length 1,197 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC1-209ENST00000395892 ACTL9Q8TC94 416 aa13.98□□□□□ -0.17
CLIC1-209ENST00000395892 GRK7Q8WTQ7 553 aa13.98□□□□□ -0.17
CLIC1-209ENST00000395892 FAM149B1Q96BN6 582 aa13.98□□□□□ -0.17
CLIC1-209ENST00000395892 FUBP3Q96I24 572 aaKnown RBP eCLIP13.98□□□□□ -0.17
CLIC1-209ENST00000395892 C8orf48Q96LL4 319 aa13.98□□□□□ -0.17
CLIC1-209ENST00000395892 KCTD15Q96SI1 283 aaPredicted RBP13.98□□□□□ -0.17
CLIC1-209ENST00000395892 VN1R3Q9BXE9 311 aa13.98□□□□□ -0.17
CLIC1-209ENST00000395892 RC3H2Q9HBD1 1191 aaKnown RBP13.98□□□□□ -0.17
CLIC1-209ENST00000395892 WDR6Q9NNW5 1121 aaKnown RBP13.98□□□□□ -0.17
CLIC1-209ENST00000395892 ANLNQ9NQW6 1124 aa13.98□□□□□ -0.17
CLIC1-209ENST00000395892 WHRNQ9P202 907 aa13.98□□□□□ -0.17
CLIC1-209ENST00000395892 H3BQF6 201 aa13.97□□□□□ -0.17
CLIC1-209ENST00000395892 I6L893 689 aaPredicted RBP13.97□□□□□ -0.17
CLIC1-209ENST00000395892 APOC4-APOC2K7ER74 178 aa13.97□□□□□ -0.17
CLIC1-209ENST00000395892 M0QYT0 321 aa13.97□□□□□ -0.17
CLIC1-209ENST00000395892 RRP9O43818 475 aaKnown RBP13.97□□□□□ -0.17
CLIC1-209ENST00000395892 PPFIA2O75334 1257 aa13.97□□□□□ -0.17
CLIC1-209ENST00000395892 UPP2O95045 317 aa13.97□□□□□ -0.17
CLIC1-209ENST00000395892 SYF2O95926 243 aaKnown RBP13.97□□□□□ -0.17
CLIC1-209ENST00000395892 KRT14P02533 472 aa13.97□□□□□ -0.17
CLIC1-209ENST00000395892 APOC2P02655 101 aa13.97□□□□□ -0.17
CLIC1-209ENST00000395892 AMHP03971 560 aa13.97□□□□□ -0.17
CLIC1-209ENST00000395892 ITIH2P19823 946 aa13.97□□□□□ -0.17
CLIC1-209ENST00000395892 MAGEA11P43364 429 aa13.97□□□□□ -0.17
CLIC1-209ENST00000395892 LMNB2Q03252 620 aa13.97□□□□□ -0.17
CLIC1-209ENST00000395892 HLTFQ14527 1009 aaKnown RBP eCLIP13.97□□□□□ -0.17
CLIC1-209ENST00000395892 UAP1Q16222 522 aaPredicted RBP13.97□□□□□ -0.17
CLIC1-209ENST00000395892 NFE2Q16621 373 aaPredicted RBP13.97□□□□□ -0.17
CLIC1-209ENST00000395892 CTXN3Q4LDR2 81 aa13.97□□□□□ -0.17
CLIC1-209ENST00000395892 ODF2Q5BJF6 829 aa13.97□□□□□ -0.17
CLIC1-209ENST00000395892 RTP2Q5QGT7 225 aa13.97□□□□□ -0.17
CLIC1-209ENST00000395892 BSPRYQ5W0U4 402 aa13.97□□□□□ -0.17
CLIC1-209ENST00000395892 NPNTQ6UXI9 565 aa13.97□□□□□ -0.17
CLIC1-209ENST00000395892 UBE2Q1Q7Z7E8 422 aa13.97□□□□□ -0.17
CLIC1-209ENST00000395892 CEP57Q86XR8 500 aa13.97□□□□□ -0.17
CLIC1-209ENST00000395892 MAP7D3Q8IWC1 876 aa13.97□□□□□ -0.17
CLIC1-209ENST00000395892 LRRC43Q8N309 656 aa13.97□□□□□ -0.17
CLIC1-209ENST00000395892 PLD5Q8N7P1 536 aa13.97□□□□□ -0.17
CLIC1-209ENST00000395892 FBXO25Q8TCJ0 367 aa13.97□□□□□ -0.17
CLIC1-209ENST00000395892 HAUS1Q96CS2 278 aa13.97□□□□□ -0.17
CLIC1-209ENST00000395892 SLC9A7Q96T83 725 aa13.97□□□□□ -0.17
CLIC1-209ENST00000395892 CALN1Q9BXU9 219 aa13.97□□□□□ -0.17
CLIC1-209ENST00000395892 ADAM7Q9H2U9 754 aa13.97□□□□□ -0.17
CLIC1-209ENST00000395892 TMPRSS4Q9NRS4 437 aa13.97□□□□□ -0.17
CLIC1-209ENST00000395892 PIGVQ9NUD9 493 aa13.97□□□□□ -0.17
CLIC1-209ENST00000395892 H0YGN5 161 aa13.96□□□□□ -0.17
CLIC1-209ENST00000395892 MAP3K13O43283 966 aa13.96□□□□□ -0.17
CLIC1-209ENST00000395892 IGLV3-25P01717 112 aa13.96□□□□□ -0.17
CLIC1-209ENST00000395892 ZSCAN5DPP0CG00 497 aa13.96□□□□□ -0.17
CLIC1-209ENST00000395892 ETS1P14921 441 aa13.96□□□□□ -0.17
CLIC1-209ENST00000395892 CSF2RAP15509 400 aa13.96□□□□□ -0.17
CLIC1-209ENST00000395892 GBP1P32455 592 aa13.96□□□□□ -0.17
CLIC1-209ENST00000395892 RDXP35241 583 aaKnown RBP13.96□□□□□ -0.17
CLIC1-209ENST00000395892 ADRA1BP35368 520 aa13.96□□□□□ -0.17
CLIC1-209ENST00000395892 GRIK1P39086 918 aa13.96□□□□□ -0.17
CLIC1-209ENST00000395892 GPR15P49685 360 aa13.96□□□□□ -0.17
CLIC1-209ENST00000395892 PLTPP55058 493 aa13.96□□□□□ -0.17
CLIC1-209ENST00000395892 DYNLT1P63172 113 aa13.96□□□□□ -0.17
CLIC1-209ENST00000395892 DEFB103AP81534 67 aa13.96□□□□□ -0.17
CLIC1-209ENST00000395892 ELAVL2Q12926 359 aaKnown RBP13.96□□□□□ -0.17
CLIC1-209ENST00000395892 GPR17Q13304 367 aa13.96□□□□□ -0.17
CLIC1-209ENST00000395892 TFDP2Q14188 446 aa13.96□□□□□ -0.17
CLIC1-209ENST00000395892 KRT81Q14533 505 aa13.96□□□□□ -0.17
CLIC1-209ENST00000395892 NOMO1Q15155 1222 aa13.96□□□□□ -0.17
CLIC1-209ENST00000395892 PPP1R7Q15435 360 aa13.96□□□□□ -0.17
CLIC1-209ENST00000395892 TRIP13Q15645 432 aaPredicted RBP13.96□□□□□ -0.17
CLIC1-209ENST00000395892 ALS2CLQ60I27 953 aa13.96□□□□□ -0.17
CLIC1-209ENST00000395892 MFSD5Q6N075 450 aa13.96□□□□□ -0.17
CLIC1-209ENST00000395892 VSTM1Q6UX27 236 aa13.96□□□□□ -0.17
CLIC1-209ENST00000395892 NECAB2Q7Z6G3 386 aa13.96□□□□□ -0.17
CLIC1-209ENST00000395892 FAM131BQ86XD5 332 aa13.96□□□□□ -0.17
CLIC1-209ENST00000395892 PYROXD2Q8N2H3 581 aa13.96□□□□□ -0.17
CLIC1-209ENST00000395892 ZNF670Q9BS34 389 aa13.96□□□□□ -0.17
CLIC1-209ENST00000395892 FAM129AQ9BZQ8 928 aa13.96□□□□□ -0.17
CLIC1-209ENST00000395892 EPB41L4BQ9H329 900 aa13.96□□□□□ -0.17
CLIC1-209ENST00000395892 CRISPLD1Q9H336 500 aa13.96□□□□□ -0.17
CLIC1-209ENST00000395892 DHX35Q9H5Z1 703 aaKnown RBP13.96□□□□□ -0.17
CLIC1-209ENST00000395892 C10orf88Q9H8K7 445 aa13.96□□□□□ -0.17
CLIC1-209ENST00000395892 USP29Q9HBJ7 922 aa13.96□□□□□ -0.17
CLIC1-209ENST00000395892 AAASQ9NRG9 546 aa13.96□□□□□ -0.17
CLIC1-209ENST00000395892 RRN3Q9NYV6 651 aa13.96□□□□□ -0.17
CLIC1-209ENST00000395892 CWC15Q9P013 229 aaKnown RBP13.96□□□□□ -0.17
CLIC1-209ENST00000395892 FBXW11Q9UKB1 542 aa13.96□□□□□ -0.17
CLIC1-209ENST00000395892 STAP1Q9ULZ2 295 aa13.96□□□□□ -0.17
CLIC1-209ENST00000395892 AP4E1Q9UPM8 1137 aa13.96□□□□□ -0.17
CLIC1-209ENST00000395892 PCDHB5Q9Y5E4 795 aa13.96□□□□□ -0.17
CLIC1-209ENST00000395892 NFS1Q9Y697 457 aa13.96□□□□□ -0.17
CLIC1-209ENST00000395892 SF3B1O75533 1304 aaKnown RBP eCLIP13.95□□□□□ -0.188e-6■■■■■ 107
CLIC1-209ENST00000395892 FAM92AA1XBS5 289 aa13.95□□□□□ -0.18
CLIC1-209ENST00000395892 GAS8O95995 478 aa13.95□□□□□ -0.18
CLIC1-209ENST00000395892 DESP17661 470 aa13.95□□□□□ -0.18
CLIC1-209ENST00000395892 CXCR3P49682 368 aa13.95□□□□□ -0.18
CLIC1-209ENST00000395892 CTCFP49711 727 aaPredicted RBP13.95□□□□□ -0.18
CLIC1-209ENST00000395892 SLC5A3P53794 718 aa13.95□□□□□ -0.18
CLIC1-209ENST00000395892 DEUP1Q05D60 604 aa13.95□□□□□ -0.18
CLIC1-209ENST00000395892 SLC10A2Q12908 348 aaPredicted RBP13.95□□□□□ -0.18
CLIC1-209ENST00000395892 SEMA3BQ13214 749 aa13.95□□□□□ -0.18
CLIC1-209ENST00000395892 DDR2Q16832 855 aa13.95□□□□□ -0.18
CLIC1-209ENST00000395892 ARTNQ5T4W7 220 aa13.95□□□□□ -0.18
CLIC1-209ENST00000395892 ZNF280DQ6N043 979 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 99.2 ms