RNA–Protein interactions for RNA: ENST00000394945.5

SPOCK1-202, Transcript of SPARC (osteonectin), cwcv and kazal like domains proteoglycan 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPOCK1, Length 4,846 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOCK1-202ENST00000394945 USP4Q13107 963 aa16.01■□□□□ 0.15
SPOCK1-202ENST00000394945 COL9A3Q14050 684 aaPredicted RBP16.01■□□□□ 0.15
SPOCK1-202ENST00000394945 ZNF720Q7Z2F6 126 aa16.01■□□□□ 0.15
SPOCK1-202ENST00000394945 CAMK1DQ8IU85 385 aa16.01■□□□□ 0.15
SPOCK1-202ENST00000394945 TIMMDC1Q9NPL8 285 aa16.01■□□□□ 0.15
SPOCK1-202ENST00000394945 ARL8BQ9NVJ2 186 aa16.01■□□□□ 0.15
SPOCK1-202ENST00000394945 TBX20Q9UMR3 447 aa16.01■□□□□ 0.15
SPOCK1-202ENST00000394945 SESN1Q9Y6P5 492 aa16.01■□□□□ 0.15
SPOCK1-202ENST00000394945 MRASO14807 208 aa16.01■□□□□ 0.15
SPOCK1-202ENST00000394945 ZSCAN5DPP0CG00 497 aa16.01■□□□□ 0.15
SPOCK1-202ENST00000394945 S100A1P23297 94 aa16.01■□□□□ 0.15
SPOCK1-202ENST00000394945 BLVRAP53004 296 aa16.01■□□□□ 0.15
SPOCK1-202ENST00000394945 WASHC5Q12768 1159 aa16.01■□□□□ 0.15
SPOCK1-202ENST00000394945 LPIN1Q14693 890 aa16.01■□□□□ 0.15
SPOCK1-202ENST00000394945 MPP6Q9NZW5 540 aa16.01■□□□□ 0.15
SPOCK1-202ENST00000394945 PTPRUQ92729 1446 aa16.01■□□□□ 0.15
SPOCK1-202ENST00000394945 NBNO60934 754 aa16.01■□□□□ 0.15
SPOCK1-202ENST00000394945 CSPG5O95196 566 aa16.01■□□□□ 0.15
SPOCK1-202ENST00000394945 CHKAP35790 457 aa16.01■□□□□ 0.15
SPOCK1-202ENST00000394945 SPANXN2Q5MJ10 180 aa16.01■□□□□ 0.15
SPOCK1-202ENST00000394945 ERO1BQ86YB8 467 aa16.01■□□□□ 0.15
SPOCK1-202ENST00000394945 PHF21AQ96BD5 680 aa16.01■□□□□ 0.15
SPOCK1-202ENST00000394945 SPON2Q9BUD6 331 aa16.01■□□□□ 0.15
SPOCK1-202ENST00000394945 BLOC1S4Q9NUP1 217 aa16.01■□□□□ 0.15
SPOCK1-202ENST00000394945 CACNA2D2Q9NY47 1150 aa16.01■□□□□ 0.15
SPOCK1-202ENST00000394945 USE1Q9NZ43 259 aa16.01■□□□□ 0.15
SPOCK1-202ENST00000394945 DKK3Q9UBP4 350 aa16.01■□□□□ 0.15
SPOCK1-202ENST00000394945 CLASP2O75122 1294 aaKnown RBP16.01■□□□□ 0.15
SPOCK1-202ENST00000394945 RAD17O75943 681 aa16.01■□□□□ 0.15
SPOCK1-202ENST00000394945 PARNO95453 639 aaKnown RBP16.01■□□□□ 0.15
SPOCK1-202ENST00000394945 HSMCR30P0CW71 290 aa16.01■□□□□ 0.15
SPOCK1-202ENST00000394945 XIAPP98170 497 aa16.01■□□□□ 0.15
SPOCK1-202ENST00000394945 MPP3Q13368 585 aa16.01■□□□□ 0.15
SPOCK1-202ENST00000394945 GSTCDQ8NEC7 633 aa16.01■□□□□ 0.15
SPOCK1-202ENST00000394945 NAT14Q8WUY8 206 aa16.01■□□□□ 0.15
SPOCK1-202ENST00000394945 WDR41Q9HAD4 459 aa16.01■□□□□ 0.15
SPOCK1-202ENST00000394945 CD274Q9NZQ7 290 aa16.01■□□□□ 0.15
SPOCK1-202ENST00000394945 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.01■□□□□ 0.15
SPOCK1-202ENST00000394945 GRIN2DO15399 1336 aa16■□□□□ 0.15
SPOCK1-202ENST00000394945 PNMA8CA0A1B0GUJ8 204 aa16■□□□□ 0.15
SPOCK1-202ENST00000394945 BTNL10A8MVZ5 291 aa16■□□□□ 0.15
SPOCK1-202ENST00000394945 NDUFS3O75489 264 aa16■□□□□ 0.15
SPOCK1-202ENST00000394945 CDK7P50613 346 aa16■□□□□ 0.15
SPOCK1-202ENST00000394945 SAMD4BQ5PRF9 694 aaKnown RBP16■□□□□ 0.15
SPOCK1-202ENST00000394945 SCN4BQ8IWT1 228 aa16■□□□□ 0.15
SPOCK1-202ENST00000394945 SYTL1Q8IYJ3 562 aa16■□□□□ 0.15
SPOCK1-202ENST00000394945 BORCS5Q969J3 196 aa16■□□□□ 0.15
SPOCK1-202ENST00000394945 HES6Q96HZ4 224 aa16■□□□□ 0.15
SPOCK1-202ENST00000394945 PIF1Q9H611 641 aa16■□□□□ 0.15
SPOCK1-202ENST00000394945 PIK3C2BO00750 1634 aa16■□□□□ 0.15
SPOCK1-202ENST00000394945 UMODL1Q5DID0 1318 aa16■□□□□ 0.15
SPOCK1-202ENST00000394945 MTSS1O43312 755 aa16■□□□□ 0.15
SPOCK1-202ENST00000394945 CNOT3O75175 753 aaKnown RBP16■□□□□ 0.15
SPOCK1-202ENST00000394945 ZNF235Q14590 738 aa16■□□□□ 0.15
SPOCK1-202ENST00000394945 PCSK7Q16549 785 aa16■□□□□ 0.15
SPOCK1-202ENST00000394945 BBS7Q8IWZ6 715 aa16■□□□□ 0.15
SPOCK1-202ENST00000394945 RBM46Q8TBY0 533 aaKnown RBP16■□□□□ 0.15
SPOCK1-202ENST00000394945 NSMCE2Q96MF7 247 aa16■□□□□ 0.15
SPOCK1-202ENST00000394945 TARS2Q9BW92 718 aaKnown RBP16■□□□□ 0.15
SPOCK1-202ENST00000394945 RERGLQ9H628 205 aa16■□□□□ 0.15
SPOCK1-202ENST00000394945 GPBP1L1Q9HC44 474 aaPredicted RBP16■□□□□ 0.15
SPOCK1-202ENST00000394945 SLC5A4Q9NY91 659 aa16■□□□□ 0.15
SPOCK1-202ENST00000394945 DOLKQ9UPQ8 538 aa16■□□□□ 0.15
SPOCK1-202ENST00000394945 ZC3H11AO75152 810 aaKnown RBP eCLIP16■□□□□ 0.15
SPOCK1-202ENST00000394945 ZMPSTE24O75844 475 aa16■□□□□ 0.15
SPOCK1-202ENST00000394945 GH1P01241 217 aa16■□□□□ 0.15
SPOCK1-202ENST00000394945 CCNA1P78396 465 aa16■□□□□ 0.15
SPOCK1-202ENST00000394945 SNRNP48Q6IEG0 339 aaKnown RBP16■□□□□ 0.15
SPOCK1-202ENST00000394945 EFCAB3Q8N7B9 438 aa16■□□□□ 0.15
SPOCK1-202ENST00000394945 TNIP3Q96KP6 325 aa16■□□□□ 0.15
SPOCK1-202ENST00000394945 DIABLOQ9NR28 239 aa16■□□□□ 0.15
SPOCK1-202ENST00000394945 FAM53CQ9NYF3 392 aa16■□□□□ 0.15
SPOCK1-202ENST00000394945 GPRC5DQ9NZD1 345 aa16■□□□□ 0.15
SPOCK1-202ENST00000394945 C6orf203Q9P0P8 240 aaPredicted RBP16■□□□□ 0.15
SPOCK1-202ENST00000394945 KLRC4O43908 158 aa16■□□□□ 0.15
SPOCK1-202ENST00000394945 TRMUO75648 421 aaKnown RBP16■□□□□ 0.15
SPOCK1-202ENST00000394945 COG2Q14746 738 aa16■□□□□ 0.15
SPOCK1-202ENST00000394945 CYP51A1Q16850 503 aa16■□□□□ 0.15
SPOCK1-202ENST00000394945 LPCAT4Q643R3 524 aa16■□□□□ 0.15
SPOCK1-202ENST00000394945 KYAT3Q6YP21 454 aaKnown RBP16■□□□□ 0.15
SPOCK1-202ENST00000394945 TRABD2AQ86V40 505 aa16■□□□□ 0.15
SPOCK1-202ENST00000394945 ATPAF2Q8N5M1 289 aa16■□□□□ 0.15
SPOCK1-202ENST00000394945 ZNF333Q96JL9 665 aa16■□□□□ 0.15
SPOCK1-202ENST00000394945 NT5C1AQ9BXI3 368 aa16■□□□□ 0.15
SPOCK1-202ENST00000394945 PHACTR1Q9C0D0 580 aa16■□□□□ 0.15
SPOCK1-202ENST00000394945 TRIM39Q9HCM9 518 aa16■□□□□ 0.15
SPOCK1-202ENST00000394945 JPH1Q9HDC5 661 aaPredicted RBP16■□□□□ 0.15
SPOCK1-202ENST00000394945 CHKBQ9Y259 395 aa16■□□□□ 0.15
SPOCK1-202ENST00000394945 IGSF9BQ9UPX0 1349 aa15.99■□□□□ 0.15
SPOCK1-202ENST00000394945 ABHD2P08910 425 aa15.99■□□□□ 0.15
SPOCK1-202ENST00000394945 RBP5P82980 135 aa15.99■□□□□ 0.15
SPOCK1-202ENST00000394945 FASTKQ14296 549 aaKnown RBP15.99■□□□□ 0.15
SPOCK1-202ENST00000394945 GPR107Q5VW38 600 aa15.99■□□□□ 0.15
SPOCK1-202ENST00000394945 C16orf46Q6P387 395 aa15.99■□□□□ 0.15
SPOCK1-202ENST00000394945 SPATA20Q8TB22 786 aa15.99■□□□□ 0.15
SPOCK1-202ENST00000394945 PWWP2AQ96N64 755 aa15.99■□□□□ 0.15
SPOCK1-202ENST00000394945 TRPC7Q9HCX4 862 aa15.99■□□□□ 0.15
SPOCK1-202ENST00000394945 IARS2Q9NSE4 1012 aaKnown RBP15.99■□□□□ 0.15
SPOCK1-202ENST00000394945 BAIAP3O94812 1187 aa15.99■□□□□ 0.15
SPOCK1-202ENST00000394945 SV2AQ7L0J3 742 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms