RNA–Protein interactions for RNA: ENST00000394820.8

NFKB1-202, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NFKB1, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-202ENST00000394820 H0YCG3 227 aa13.69□□□□□ -0.22
NFKB1-202ENST00000394820 ITGB3P05106 788 aa13.69□□□□□ -0.22
NFKB1-202ENST00000394820 EDN1P05305 212 aa13.69□□□□□ -0.22
NFKB1-202ENST00000394820 PYGLP06737 847 aa13.69□□□□□ -0.22
NFKB1-202ENST00000394820 SDC4P31431 198 aa13.69□□□□□ -0.22
NFKB1-202ENST00000394820 MLH1P40692 756 aa13.69□□□□□ -0.22
NFKB1-202ENST00000394820 SEPT6Q14141 434 aa13.69□□□□□ -0.22
NFKB1-202ENST00000394820 KCTD2Q14681 263 aa13.69□□□□□ -0.22
NFKB1-202ENST00000394820 ZACNQ401N2 412 aa13.69□□□□□ -0.22
NFKB1-202ENST00000394820 TTC13Q8NBP0 860 aa13.69□□□□□ -0.22
NFKB1-202ENST00000394820 MAGEC3Q8TD91 643 aa13.69□□□□□ -0.22
NFKB1-202ENST00000394820 NRXN2Q9P2S2 1712 aa13.69□□□□□ -0.22
NFKB1-202ENST00000394820 SPATA31C2B4DYI2 1134 aa13.68□□□□□ -0.22
NFKB1-202ENST00000394820 MAFGO15525 162 aa13.68□□□□□ -0.22
NFKB1-202ENST00000394820 CSPG5O95196 566 aa13.68□□□□□ -0.22
NFKB1-202ENST00000394820 VNN1O95497 513 aa13.68□□□□□ -0.22
NFKB1-202ENST00000394820 RAG1P15918 1043 aa13.68□□□□□ -0.22
NFKB1-202ENST00000394820 EEF1B2P24534 225 aaKnown RBP13.68□□□□□ -0.22
NFKB1-202ENST00000394820 PIGHQ14442 188 aaPredicted RBP13.68□□□□□ -0.22
NFKB1-202ENST00000394820 FASTKD1Q53R41 847 aaKnown RBP13.68□□□□□ -0.22
NFKB1-202ENST00000394820 SCUBE3Q8IX30 993 aa13.68□□□□□ -0.22
NFKB1-202ENST00000394820 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.68□□□□□ -0.22
NFKB1-202ENST00000394820 GDPD5Q8WTR4 605 aa13.68□□□□□ -0.22
NFKB1-202ENST00000394820 SEPT1Q8WYJ6 367 aa13.68□□□□□ -0.22
NFKB1-202ENST00000394820 PRPF18Q99633 342 aaKnown RBP13.68□□□□□ -0.22
NFKB1-202ENST00000394820 ETAA1Q9NY74 926 aa13.68□□□□□ -0.22
NFKB1-202ENST00000394820 USP18Q9UMW8 372 aa13.68□□□□□ -0.22
NFKB1-202ENST00000394820 CLEC11AQ9Y240 323 aa13.68□□□□□ -0.22
NFKB1-202ENST00000394820 SNX9Q9Y5X1 595 aa13.68□□□□□ -0.22
NFKB1-202ENST00000394820 TMEM63AO94886 807 aa13.68□□□□□ -0.22
NFKB1-202ENST00000394820 GSTA2P09210 222 aa13.68□□□□□ -0.22
NFKB1-202ENST00000394820 ANPEPP15144 967 aa13.68□□□□□ -0.22
NFKB1-202ENST00000394820 TBXAS1P24557 533 aaPredicted RBP13.68□□□□□ -0.22
NFKB1-202ENST00000394820 RPS12P25398 132 aaKnown RBP13.68□□□□□ -0.22
NFKB1-202ENST00000394820 PGGT1BP53609 377 aa13.68□□□□□ -0.22
NFKB1-202ENST00000394820 ITKQ08881 620 aa13.68□□□□□ -0.22
NFKB1-202ENST00000394820 PRPSAP1Q14558 356 aa13.68□□□□□ -0.22
NFKB1-202ENST00000394820 ZC3H12AQ5D1E8 599 aaKnown RBP13.68□□□□□ -0.22
NFKB1-202ENST00000394820 SPATA6LQ8N4H0 392 aa13.68□□□□□ -0.22
NFKB1-202ENST00000394820 C10orf82Q8WW14 230 aa13.68□□□□□ -0.22
NFKB1-202ENST00000394820 MIPEPQ99797 713 aa13.68□□□□□ -0.22
NFKB1-202ENST00000394820 DCUN1D5Q9BTE7 237 aa13.68□□□□□ -0.22
NFKB1-202ENST00000394820 TXLNGYQ9BZA5 131 aa13.68□□□□□ -0.22
NFKB1-202ENST00000394820 ASNSD1Q9NWL6 643 aa13.68□□□□□ -0.22
NFKB1-202ENST00000394820 ARHGAP28Q9P2N2 729 aa13.68□□□□□ -0.22
NFKB1-202ENST00000394820 AURKCQ9UQB9 309 aa13.68□□□□□ -0.22
NFKB1-202ENST00000394820 LRRC37AA6NMS7 1700 aa13.68□□□□□ -0.22
NFKB1-202ENST00000394820 C10orf71Q711Q0 1435 aa13.68□□□□□ -0.22
NFKB1-202ENST00000394820 KCNK1O00180 336 aa13.68□□□□□ -0.22
NFKB1-202ENST00000394820 HNRNPRO43390 633 aaKnown RBP13.68□□□□□ -0.22
NFKB1-202ENST00000394820 TPH1P17752 444 aa13.68□□□□□ -0.22
NFKB1-202ENST00000394820 COPAP53621 1224 aa13.68□□□□□ -0.22
NFKB1-202ENST00000394820 SLC12A2P55011 1212 aa13.68□□□□□ -0.22
NFKB1-202ENST00000394820 TFDP2Q14188 446 aa13.68□□□□□ -0.22
NFKB1-202ENST00000394820 N4BP2L1Q5TBK1 243 aaPredicted RBP13.68□□□□□ -0.22
NFKB1-202ENST00000394820 HPS6Q86YV9 775 aa13.68□□□□□ -0.22
NFKB1-202ENST00000394820 TRIM42Q8IWZ5 723 aa13.68□□□□□ -0.22
NFKB1-202ENST00000394820 ALLCQ8N6M5 410 aa13.68□□□□□ -0.22
NFKB1-202ENST00000394820 RXFP2Q8WXD0 754 aa13.68□□□□□ -0.22
NFKB1-202ENST00000394820 CPT1BQ92523 772 aa13.68□□□□□ -0.22
NFKB1-202ENST00000394820 SLC7A6OSQ96CW6 309 aaPredicted RBP13.68□□□□□ -0.22
NFKB1-202ENST00000394820 ZBED3Q96IU2 234 aaPredicted RBP13.68□□□□□ -0.22
NFKB1-202ENST00000394820 TUBGCP5Q96RT8 1024 aa13.68□□□□□ -0.22
NFKB1-202ENST00000394820 PORCNQ9H237 461 aa13.68□□□□□ -0.22
NFKB1-202ENST00000394820 CCDC189A1A4V9 331 aa13.67□□□□□ -0.22
NFKB1-202ENST00000394820 ZBBXA8MT70 800 aa13.67□□□□□ -0.22
NFKB1-202ENST00000394820 CXCL8P10145 99 aa13.67□□□□□ -0.22
NFKB1-202ENST00000394820 TGFB2P61812 414 aa13.67□□□□□ -0.22
NFKB1-202ENST00000394820 DPYSL3Q14195 570 aa13.67□□□□□ -0.22
NFKB1-202ENST00000394820 FAM131BQ86XD5 332 aa13.67□□□□□ -0.22
NFKB1-202ENST00000394820 MAB21L3Q8N8X9 362 aa13.67□□□□□ -0.22
NFKB1-202ENST00000394820 DDX1Q92499 740 aaKnown RBP13.67□□□□□ -0.22
NFKB1-202ENST00000394820 INPP5DQ92835 1189 aa13.67□□□□□ -0.22
NFKB1-202ENST00000394820 ASCC2Q9H1I8 757 aaPredicted RBP13.67□□□□□ -0.22
NFKB1-202ENST00000394820 SUDS3Q9H7L9 328 aaPredicted RBP13.67□□□□□ -0.22
NFKB1-202ENST00000394820 PCDH9Q9HC56 1237 aa13.67□□□□□ -0.22
NFKB1-202ENST00000394820 PDGFCQ9NRA1 345 aa13.67□□□□□ -0.22
NFKB1-202ENST00000394820 PNPOQ9NVS9 261 aa13.67□□□□□ -0.22
NFKB1-202ENST00000394820 TLK1Q9UKI8 766 aa13.67□□□□□ -0.22
NFKB1-202ENST00000394820 PRRC2BQ5JSZ5 2229 aaKnown RBP13.67□□□□□ -0.22
NFKB1-202ENST00000394820 LTBP1Q14766 1721 aa13.67□□□□□ -0.22
NFKB1-202ENST00000394820 CAPN8A6NHC0 703 aa13.67□□□□□ -0.22
NFKB1-202ENST00000394820 C2CD2LO14523 706 aa13.67□□□□□ -0.22
NFKB1-202ENST00000394820 KIF3CO14782 793 aa13.67□□□□□ -0.22
NFKB1-202ENST00000394820 SORBS2O94875 1100 aaKnown RBP13.67□□□□□ -0.22
NFKB1-202ENST00000394820 HMGCRP04035 888 aa13.67□□□□□ -0.22
NFKB1-202ENST00000394820 TXNP10599 105 aaKnown RBP13.67□□□□□ -0.22
NFKB1-202ENST00000394820 ZNF280AP59817 542 aaPredicted RBP13.67□□□□□ -0.22
NFKB1-202ENST00000394820 GCNT1Q02742 428 aa13.67□□□□□ -0.22
NFKB1-202ENST00000394820 EMC10Q5UCC4 262 aa13.67□□□□□ -0.22
NFKB1-202ENST00000394820 TTC39BQ5VTQ0 682 aaPredicted RBP13.67□□□□□ -0.22
NFKB1-202ENST00000394820 IRGCQ6NXR0 463 aa13.67□□□□□ -0.22
NFKB1-202ENST00000394820 TRMT10BQ6PF06 316 aaKnown RBP13.67□□□□□ -0.22
NFKB1-202ENST00000394820 ULK2Q8IYT8 1036 aa13.67□□□□□ -0.22
NFKB1-202ENST00000394820 CPB2Q96IY4 423 aa13.67□□□□□ -0.22
NFKB1-202ENST00000394820 MED10Q9BTT4 135 aa13.67□□□□□ -0.22
NFKB1-202ENST00000394820 MRPL4Q9BYD3 311 aaKnown RBP13.67□□□□□ -0.22
NFKB1-202ENST00000394820 XAB2Q9HCS7 855 aaKnown RBP13.67□□□□□ -0.22
NFKB1-202ENST00000394820 RGS17Q9UGC6 210 aaPredicted RBP13.67□□□□□ -0.22
NFKB1-202ENST00000394820 PPM1HQ9ULR3 514 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms