RNA–Protein interactions for RNA: ENST00000394597.6

RFFL-202, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFFL, Length 4,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-202ENST00000394597 APTXQ7Z2E3 356 aaKnown RBP5.89□□□□□ -1.47
RFFL-202ENST00000394597 CROCCP3Q8IVE0 287 aa5.89□□□□□ -1.47
RFFL-202ENST00000394597 PDZD8Q8NEN9 1154 aa5.89□□□□□ -1.47
RFFL-202ENST00000394597 PTPRN2Q92932 1015 aa5.89□□□□□ -1.47
RFFL-202ENST00000394597 DGCR14Q96DF8 476 aaKnown RBP5.89□□□□□ -1.47
RFFL-202ENST00000394597 TMEM176AQ96HP8 235 aa5.89□□□□□ -1.47
RFFL-202ENST00000394597 DNAJC1Q96KC8 554 aaKnown RBP5.89□□□□□ -1.47
RFFL-202ENST00000394597 CCDC138Q96M89 665 aa5.89□□□□□ -1.47
RFFL-202ENST00000394597 BTBD10Q9BSF8 475 aa5.89□□□□□ -1.47
RFFL-202ENST00000394597 OSBPL8Q9BZF1 889 aa5.89□□□□□ -1.47
RFFL-202ENST00000394597 GRIP2Q9C0E4 1043 aa5.89□□□□□ -1.47
RFFL-202ENST00000394597 CDT1Q9H211 546 aa5.89□□□□□ -1.47
RFFL-202ENST00000394597 BCAS3Q9H6U6 928 aa5.89□□□□□ -1.47
RFFL-202ENST00000394597 DDX28Q9NUL7 540 aaKnown RBP5.89□□□□□ -1.47
RFFL-202ENST00000394597 PCMTD2Q9NV79 361 aa5.89□□□□□ -1.47
RFFL-202ENST00000394597 SMG5Q9UPR3 1016 aaKnown RBP5.89□□□□□ -1.47
RFFL-202ENST00000394597 TDRKHQ9Y2W6 561 aaKnown RBP5.89□□□□□ -1.47
RFFL-202ENST00000394597 DTNAQ9Y4J8 743 aa5.89□□□□□ -1.47
RFFL-202ENST00000394597 TRPV2Q9Y5S1 764 aa5.89□□□□□ -1.47
RFFL-202ENST00000394597 MROH7Q68CQ1 1323 aa5.89□□□□□ -1.47
RFFL-202ENST00000394597 ZBBXA8MT70 800 aa5.89□□□□□ -1.47
RFFL-202ENST00000394597 SMAPO00193 183 aa5.89□□□□□ -1.47
RFFL-202ENST00000394597 CA12O43570 354 aa5.89□□□□□ -1.47
RFFL-202ENST00000394597 PGK1P00558 417 aa5.89□□□□□ -1.47
RFFL-202ENST00000394597 THP07101 528 aa5.89□□□□□ -1.47
RFFL-202ENST00000394597 NFKBIAP25963 317 aa5.89□□□□□ -1.47
RFFL-202ENST00000394597 PCSK1P29120 753 aa5.89□□□□□ -1.47
RFFL-202ENST00000394597 ACADSBP45954 432 aa5.89□□□□□ -1.47
RFFL-202ENST00000394597 ZACNQ401N2 412 aa5.89□□□□□ -1.47
RFFL-202ENST00000394597 PPP6R3Q5H9R7 873 aaPredicted RBP5.89□□□□□ -1.47
RFFL-202ENST00000394597 CASC4Q6P4E1 433 aa5.89□□□□□ -1.47
RFFL-202ENST00000394597 IRF2BP2Q7Z5L9 587 aa5.89□□□□□ -1.47
RFFL-202ENST00000394597 LRRC6Q86X45 466 aa5.89□□□□□ -1.47
RFFL-202ENST00000394597 CRLF3Q8IUI8 442 aa5.89□□□□□ -1.47
RFFL-202ENST00000394597 GALNT4Q8N4A0 578 aa5.89□□□□□ -1.47
RFFL-202ENST00000394597 CCNYQ8ND76 341 aa5.89□□□□□ -1.47
RFFL-202ENST00000394597 ACTRT1Q8TDG2 376 aa5.89□□□□□ -1.47
RFFL-202ENST00000394597 NAT14Q8WUY8 206 aa5.89□□□□□ -1.47
RFFL-202ENST00000394597 ZNF606Q8WXB4 792 aa5.89□□□□□ -1.47
RFFL-202ENST00000394597 PPP1R14BQ96C90 147 aa5.89□□□□□ -1.47
RFFL-202ENST00000394597 MCEEQ96PE7 176 aa5.89□□□□□ -1.47
RFFL-202ENST00000394597 SERPINI1Q99574 410 aa5.89□□□□□ -1.47
RFFL-202ENST00000394597 TSSK1BQ9BXA7 367 aa5.89□□□□□ -1.47
RFFL-202ENST00000394597 ARHGEF3Q9NR81 526 aa5.89□□□□□ -1.47
RFFL-202ENST00000394597 FAM49BQ9NUQ9 324 aa5.89□□□□□ -1.47
RFFL-202ENST00000394597 WDR70Q9NW82 654 aa5.89□□□□□ -1.47
RFFL-202ENST00000394597 SELENONQ9NZV5 590 aa5.89□□□□□ -1.47
RFFL-202ENST00000394597 SEPT10Q9P0V9 454 aa5.89□□□□□ -1.47
RFFL-202ENST00000394597 CHORDC1Q9UHD1 332 aaPredicted RBP5.89□□□□□ -1.47
RFFL-202ENST00000394597 APPL1Q9UKG1 709 aa5.89□□□□□ -1.47
RFFL-202ENST00000394597 MYH15Q9Y2K3 1946 aa5.89□□□□□ -1.47
RFFL-202ENST00000394597 SMIM35A0A1B0GVV1 85 aa5.88□□□□□ -1.47
RFFL-202ENST00000394597 PIK3R2O00459 728 aa5.88□□□□□ -1.47
RFFL-202ENST00000394597 MSCO60682 206 aa5.88□□□□□ -1.47
RFFL-202ENST00000394597 ATG7O95352 703 aa5.88□□□□□ -1.47
RFFL-202ENST00000394597 LSM8O95777 96 aaKnown RBP5.88□□□□□ -1.47
RFFL-202ENST00000394597 RARGP13631 454 aa5.88□□□□□ -1.47
RFFL-202ENST00000394597 MMP13P45452 471 aa5.88□□□□□ -1.47
RFFL-202ENST00000394597 NUP107P57740 925 aa5.88□□□□□ -1.47
RFFL-202ENST00000394597 GHRHRQ02643 423 aa5.88□□□□□ -1.47
RFFL-202ENST00000394597 BFSP2Q13515 415 aa5.88□□□□□ -1.47
RFFL-202ENST00000394597 KCTD19Q17RG1 926 aaPredicted RBP5.88□□□□□ -1.47
RFFL-202ENST00000394597 GOLGA7BQ2TAP0 167 aa5.88□□□□□ -1.47
RFFL-202ENST00000394597 ZNF792Q3KQV3 632 aa5.88□□□□□ -1.47
RFFL-202ENST00000394597 KAT5Q92993 513 aa5.88□□□□□ -1.47
RFFL-202ENST00000394597 ELMO3Q96BJ8 720 aa5.88□□□□□ -1.47
RFFL-202ENST00000394597 YIPF2Q9BWQ6 316 aa5.88□□□□□ -1.47
RFFL-202ENST00000394597 KLHL4Q9C0H6 718 aa5.88□□□□□ -1.47
RFFL-202ENST00000394597 CAAP1Q9H8G2 361 aa5.88□□□□□ -1.47
RFFL-202ENST00000394597 PLEKHA5Q9HAU0 1116 aa5.88□□□□□ -1.47
RFFL-202ENST00000394597 MRGBPQ9NV56 204 aa5.88□□□□□ -1.47
RFFL-202ENST00000394597 SENP1Q9P0U3 644 aa5.88□□□□□ -1.47
RFFL-202ENST00000394597 PGAP2Q9UHJ9 254 aa5.88□□□□□ -1.47
RFFL-202ENST00000394597 BARX2Q9UMQ3 279 aaPredicted RBP5.88□□□□□ -1.47
RFFL-202ENST00000394597 LRRC42Q9Y546 428 aa5.88□□□□□ -1.47
RFFL-202ENST00000394597 ARIH2O95376 493 aa5.88□□□□□ -1.47
RFFL-202ENST00000394597 PAEPP09466 180 aa5.88□□□□□ -1.47
RFFL-202ENST00000394597 AKAP5P24588 427 aa5.88□□□□□ -1.47
RFFL-202ENST00000394597 MAP4P27816 1152 aaKnown RBP5.88□□□□□ -1.47
RFFL-202ENST00000394597 TNFSF9P41273 254 aa5.88□□□□□ -1.47
RFFL-202ENST00000394597 KCNJ1P48048 391 aa5.88□□□□□ -1.47
RFFL-202ENST00000394597 CDK7P50613 346 aa5.88□□□□□ -1.47
RFFL-202ENST00000394597 NAA20P61599 178 aa5.88□□□□□ -1.47
RFFL-202ENST00000394597 PTPN11Q06124 597 aaPredicted RBP5.88□□□□□ -1.47
RFFL-202ENST00000394597 ACAP1Q15027 740 aa5.88□□□□□ -1.47
RFFL-202ENST00000394597 TRMT5Q32P41 509 aaKnown RBP5.88□□□□□ -1.47
RFFL-202ENST00000394597 TDRD10Q5VZ19 366 aaKnown RBP5.88□□□□□ -1.47
RFFL-202ENST00000394597 EEF1DP3Q658K8 133 aa5.88□□□□□ -1.47
RFFL-202ENST00000394597 ATG16L1Q676U5 607 aa5.88□□□□□ -1.47
RFFL-202ENST00000394597 RNF43Q68DV7 783 aa5.88□□□□□ -1.47
RFFL-202ENST00000394597 LPCAT2Q7L5N7 544 aa5.88□□□□□ -1.47
RFFL-202ENST00000394597 PIGWQ7Z7B1 504 aa5.88□□□□□ -1.47
RFFL-202ENST00000394597 NOP9Q86U38 636 aaKnown RBP5.88□□□□□ -1.47
RFFL-202ENST00000394597 FAM71AQ8IYT1 594 aa5.88□□□□□ -1.47
RFFL-202ENST00000394597 KIAA0319LQ8IZA0 1049 aa5.88□□□□□ -1.47
RFFL-202ENST00000394597 SLC25A41Q8N5S1 370 aa5.88□□□□□ -1.47
RFFL-202ENST00000394597 SERBP1Q8NC51 408 aaKnown RBP eCLIP5.88□□□□□ -1.47
RFFL-202ENST00000394597 NRBF2Q96F24 287 aa5.88□□□□□ -1.47
RFFL-202ENST00000394597 DCUN1D5Q9BTE7 237 aa5.88□□□□□ -1.47
RFFL-202ENST00000394597 DENND2DQ9H6A0 471 aaPredicted RBP5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms