RNA–Protein interactions for RNA: ENST00000394239.7

TUBD1-205, Transcript of tubulin delta 1, humanhuman

TSL 2 BASIC

Gene TUBD1, Length 1,680 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-205ENST00000394239 CCDC25Q86WR0 208 aa12.88□□□□□ -0.35
TUBD1-205ENST00000394239 XYLT1Q86Y38 959 aa12.88□□□□□ -0.35
TUBD1-205ENST00000394239 BBOF1Q8ND07 529 aa12.88□□□□□ -0.35
TUBD1-205ENST00000394239 IPO4Q8TEX9 1081 aaKnown RBP12.88□□□□□ -0.35
TUBD1-205ENST00000394239 FNIP1Q8TF40 1166 aa12.88□□□□□ -0.35
TUBD1-205ENST00000394239 SENP8Q96LD8 212 aa12.88□□□□□ -0.35
TUBD1-205ENST00000394239 CPXM1Q96SM3 734 aa12.88□□□□□ -0.35
TUBD1-205ENST00000394239 SEMA4AQ9H3S1 761 aa12.88□□□□□ -0.35
TUBD1-205ENST00000394239 NSUN3Q9H649 340 aaKnown RBP12.88□□□□□ -0.35
TUBD1-205ENST00000394239 NGRNQ9NPE2 291 aaKnown RBP12.88□□□□□ -0.35
TUBD1-205ENST00000394239 PRDM6Q9NQX0 595 aa12.88□□□□□ -0.35
TUBD1-205ENST00000394239 KIAA1257Q9ULG3 409 aa12.88□□□□□ -0.35
TUBD1-205ENST00000394239 IRAK3Q9Y616 596 aa12.88□□□□□ -0.35
TUBD1-205ENST00000394239 TSC2P49815 1807 aa12.87□□□□□ -0.35
TUBD1-205ENST00000394239 LRRD1A4D1F6 860 aa12.87□□□□□ -0.35
TUBD1-205ENST00000394239 KPNA7A9QM74 516 aa12.87□□□□□ -0.35
TUBD1-205ENST00000394239 HCRTO43612 131 aa12.87□□□□□ -0.35
TUBD1-205ENST00000394239 SHBGP04278 402 aa12.87□□□□□ -0.35
TUBD1-205ENST00000394239 ERBB2P04626 1255 aa12.87□□□□□ -0.35
TUBD1-205ENST00000394239 URODP06132 367 aa12.87□□□□□ -0.35
TUBD1-205ENST00000394239 KRT7P08729 469 aa12.87□□□□□ -0.35
TUBD1-205ENST00000394239 KRT10P13645 584 aa12.87□□□□□ -0.35
TUBD1-205ENST00000394239 TAF6P49848 677 aa12.87□□□□□ -0.35
TUBD1-205ENST00000394239 CDR1P51861 262 aa12.87□□□□□ -0.35
TUBD1-205ENST00000394239 MRPL58Q14197 206 aaKnown RBP12.87□□□□□ -0.35
TUBD1-205ENST00000394239 SLC29A2Q14542 456 aa12.87□□□□□ -0.35
TUBD1-205ENST00000394239 SKIDA1Q1XH10 827 aa12.87□□□□□ -0.35
TUBD1-205ENST00000394239 VARS2Q5ST30 1063 aaKnown RBP12.87□□□□□ -0.35
TUBD1-205ENST00000394239 KIAA1841Q6NSI8 718 aa12.87□□□□□ -0.35
TUBD1-205ENST00000394239 DSTYKQ6XUX3 929 aa12.87□□□□□ -0.35
TUBD1-205ENST00000394239 TRMT10CQ7L0Y3 403 aaKnown RBP12.87□□□□□ -0.35
TUBD1-205ENST00000394239 LRRC52Q8N7C0 313 aa12.87□□□□□ -0.35
TUBD1-205ENST00000394239 CCHCR1Q8TD31 782 aa12.87□□□□□ -0.35
TUBD1-205ENST00000394239 FAM118BQ9BPY3 351 aa12.87□□□□□ -0.35
TUBD1-205ENST00000394239 CLSTN3Q9BQT9 956 aa12.87□□□□□ -0.35
TUBD1-205ENST00000394239 NT5C1AQ9BXI3 368 aa12.87□□□□□ -0.35
TUBD1-205ENST00000394239 MIS12Q9H081 205 aa12.87□□□□□ -0.35
TUBD1-205ENST00000394239 IGFLR1Q9H665 355 aa12.87□□□□□ -0.35
TUBD1-205ENST00000394239 METTL5Q9NRN9 209 aaKnown RBP12.87□□□□□ -0.35
TUBD1-205ENST00000394239 MRPL17Q9NRX2 175 aaKnown RBP12.87□□□□□ -0.35
TUBD1-205ENST00000394239 TJP2Q9UDY2 1190 aa12.87□□□□□ -0.35
TUBD1-205ENST00000394239 ANAPC5Q9UJX4 755 aa12.87□□□□□ -0.35
TUBD1-205ENST00000394239 NOVA2Q9UNW9 492 aaKnown RBP12.87□□□□□ -0.35
TUBD1-205ENST00000394239 hCG_1818297A0A087WSY0 165 aa12.86□□□□□ -0.35
TUBD1-205ENST00000394239 CYB561D2O14569 222 aa12.86□□□□□ -0.35
TUBD1-205ENST00000394239 RIPK2O43353 540 aa12.86□□□□□ -0.35
TUBD1-205ENST00000394239 LIASO43766 372 aa12.86□□□□□ -0.35
TUBD1-205ENST00000394239 TBC1D4O60343 1298 aa12.86□□□□□ -0.35
TUBD1-205ENST00000394239 CLASP2O75122 1294 aaKnown RBP12.86□□□□□ -0.35
TUBD1-205ENST00000394239 GLP2RO95838 553 aa12.86□□□□□ -0.35
TUBD1-205ENST00000394239 IVDP26440 423 aa12.86□□□□□ -0.35
TUBD1-205ENST00000394239 GABRB2P47870 512 aa12.86□□□□□ -0.35
TUBD1-205ENST00000394239 VPS41P49754 854 aa12.86□□□□□ -0.35
TUBD1-205ENST00000394239 ITGA8P53708 1063 aa12.86□□□□□ -0.35
TUBD1-205ENST00000394239 DLX2Q07687 328 aaPredicted RBP12.86□□□□□ -0.35
TUBD1-205ENST00000394239 ELAVL2Q12926 359 aaKnown RBP12.86□□□□□ -0.35
TUBD1-205ENST00000394239 KCNC3Q14003 757 aa12.86□□□□□ -0.35
TUBD1-205ENST00000394239 STILQ15468 1287 aa12.86□□□□□ -0.35
TUBD1-205ENST00000394239 DUSP6Q16828 381 aa12.86□□□□□ -0.35
TUBD1-205ENST00000394239 TFDP3Q5H9I0 405 aa12.86□□□□□ -0.35
TUBD1-205ENST00000394239 WSCD1Q658N2 575 aa12.86□□□□□ -0.35
TUBD1-205ENST00000394239 TXNRD3NBQ6F5E7 133 aa12.86□□□□□ -0.35
TUBD1-205ENST00000394239 MAFAQ8NHW3 353 aaPredicted RBP12.86□□□□□ -0.35
TUBD1-205ENST00000394239 JOSD2Q8TAC2 188 aa12.86□□□□□ -0.35
TUBD1-205ENST00000394239 RAPGEF5Q92565 580 aa12.86□□□□□ -0.35
TUBD1-205ENST00000394239 ACSF2Q96CM8 615 aaPredicted RBP12.86□□□□□ -0.35
TUBD1-205ENST00000394239 KLHL5Q96PQ7 755 aa12.86□□□□□ -0.35
TUBD1-205ENST00000394239 TMEM209Q96SK2 561 aa12.86□□□□□ -0.35
TUBD1-205ENST00000394239 RTP3Q9BQQ7 232 aa12.86□□□□□ -0.35
TUBD1-205ENST00000394239 TLE6Q9H808 572 aa12.86□□□□□ -0.35
TUBD1-205ENST00000394239 RXFP1Q9HBX9 757 aa12.86□□□□□ -0.35
TUBD1-205ENST00000394239 PCDHB8Q9UN66 801 aa12.86□□□□□ -0.35
TUBD1-205ENST00000394239 NEU2Q9Y3R4 380 aa12.86□□□□□ -0.35
TUBD1-205ENST00000394239 NME7Q9Y5B8 376 aa12.86□□□□□ -0.35
TUBD1-205ENST00000394239 SNX9Q9Y5X1 595 aa12.86□□□□□ -0.35
TUBD1-205ENST00000394239 TRAPPC3O43617 180 aa12.86□□□□□ -0.35
TUBD1-205ENST00000394239 LRCH4O75427 683 aa12.86□□□□□ -0.35
TUBD1-205ENST00000394239 MDH1P40925 334 aaKnown RBP12.86□□□□□ -0.35
TUBD1-205ENST00000394239 CDKN2BP42772 138 aa12.86□□□□□ -0.35
TUBD1-205ENST00000394239 GPD2P43304 727 aa12.86□□□□□ -0.35
TUBD1-205ENST00000394239 MAGOHP61326 146 aaKnown RBP12.86□□□□□ -0.35
TUBD1-205ENST00000394239 PPP2R2AP63151 447 aa12.86□□□□□ -0.35
TUBD1-205ENST00000394239 GUCY1A3Q02108 690 aa12.86□□□□□ -0.35
TUBD1-205ENST00000394239 SLC25A11Q02978 314 aaKnown RBP12.86□□□□□ -0.35
TUBD1-205ENST00000394239 ADCY2Q08462 1091 aa12.86□□□□□ -0.35
TUBD1-205ENST00000394239 BYSLQ13895 437 aaKnown RBP12.86□□□□□ -0.35
TUBD1-205ENST00000394239 PSMD5Q16401 504 aa12.86□□□□□ -0.35
TUBD1-205ENST00000394239 SOWAHAQ2M3V2 549 aa12.86□□□□□ -0.35
TUBD1-205ENST00000394239 SV2CQ496J9 727 aa12.86□□□□□ -0.35
TUBD1-205ENST00000394239 FAM102AQ5T9C2 384 aaPredicted RBP12.86□□□□□ -0.35
TUBD1-205ENST00000394239 PDE12Q6L8Q7 609 aaKnown RBP12.86□□□□□ -0.35
TUBD1-205ENST00000394239 DRICH1Q6PGQ1 229 aaPredicted RBP12.86□□□□□ -0.35
TUBD1-205ENST00000394239 RHBDF2Q6PJF5 856 aa12.86□□□□□ -0.35
TUBD1-205ENST00000394239 LCLAT1Q6UWP7 414 aa12.86□□□□□ -0.35
TUBD1-205ENST00000394239 UBA3Q8TBC4 463 aa12.86□□□□□ -0.35
TUBD1-205ENST00000394239 MCRS1Q96EZ8 462 aa12.86□□□□□ -0.35
TUBD1-205ENST00000394239 ZNF560Q96MR9 790 aa12.86□□□□□ -0.35
TUBD1-205ENST00000394239 ZWILCHQ9H900 591 aa12.86□□□□□ -0.35
TUBD1-205ENST00000394239 GDAP2Q9NXN4 497 aa12.86□□□□□ -0.35
TUBD1-205ENST00000394239 ZNF148Q9UQR1 794 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms