RNA–Protein interactions for RNA: ENST00000393310.5

LIMS1-203, Transcript of LIM zinc finger domain containing 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIMS1, Length 4,392 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-203ENST00000393310 RAB33AQ14088 237 aa8.43□□□□□ -1.06
LIMS1-203ENST00000393310 DUOXA2Q1HG44 320 aa8.43□□□□□ -1.06
LIMS1-203ENST00000393310 C6orf132Q5T0Z8 1188 aa8.43□□□□□ -1.06
LIMS1-203ENST00000393310 TTC39BQ5VTQ0 682 aaPredicted RBP8.43□□□□□ -1.06
LIMS1-203ENST00000393310 RD3Q7Z3Z2 195 aa8.43□□□□□ -1.06
LIMS1-203ENST00000393310 KDELC2Q7Z4H8 507 aa8.43□□□□□ -1.06
LIMS1-203ENST00000393310 GPBP1Q86WP2 473 aa8.43□□□□□ -1.06
LIMS1-203ENST00000393310 BRSK2Q8IWQ3 736 aa8.43□□□□□ -1.06
LIMS1-203ENST00000393310 TRAPPC12Q8WVT3 735 aa8.43□□□□□ -1.06
LIMS1-203ENST00000393310 CPVLQ9H3G5 476 aa8.43□□□□□ -1.06
LIMS1-203ENST00000393310 GKN1Q9NS71 199 aa8.43□□□□□ -1.06
LIMS1-203ENST00000393310 CHMP2BQ9UQN3 213 aa8.43□□□□□ -1.06
LIMS1-203ENST00000393310 A0A0D9SFI3 127 aa8.43□□□□□ -1.06
LIMS1-203ENST00000393310 CYB561D2O14569 222 aa8.43□□□□□ -1.06
LIMS1-203ENST00000393310 SLC2A3P11169 496 aa8.43□□□□□ -1.06
LIMS1-203ENST00000393310 EPB41P11171 864 aaKnown RBP8.43□□□□□ -1.06
LIMS1-203ENST00000393310 DSG1Q02413 1049 aa8.43□□□□□ -1.06
LIMS1-203ENST00000393310 CTTNQ14247 550 aaKnown RBP8.43□□□□□ -1.06
LIMS1-203ENST00000393310 FAM133BQ5BKY9 247 aaKnown RBP8.43□□□□□ -1.06
LIMS1-203ENST00000393310 HECTD3Q5T447 861 aa8.43□□□□□ -1.06
LIMS1-203ENST00000393310 FAM228AQ86W67 206 aa8.43□□□□□ -1.06
LIMS1-203ENST00000393310 KSR1Q8IVT5 923 aa8.43□□□□□ -1.06
LIMS1-203ENST00000393310 KIAA0319LQ8IZA0 1049 aa8.43□□□□□ -1.06
LIMS1-203ENST00000393310 PPHLN1Q8NEY8 458 aaKnown RBP8.43□□□□□ -1.06
LIMS1-203ENST00000393310 SNIP1Q8TAD8 396 aaKnown RBP8.43□□□□□ -1.06
LIMS1-203ENST00000393310 GAB3Q8WWW8 586 aa8.43□□□□□ -1.06
LIMS1-203ENST00000393310 NCLNQ969V3 563 aa8.43□□□□□ -1.06
LIMS1-203ENST00000393310 ZNF274Q96GC6 653 aaPredicted RBP8.43□□□□□ -1.06
LIMS1-203ENST00000393310 LSM14BQ9BX40 385 aaKnown RBP8.43□□□□□ -1.06
LIMS1-203ENST00000393310 A8MXQ7 604 aa8.43□□□□□ -1.06
LIMS1-203ENST00000393310 CASQ2O14958 399 aaPredicted RBP8.43□□□□□ -1.06
LIMS1-203ENST00000393310 CYP3A4P08684 503 aa8.43□□□□□ -1.06
LIMS1-203ENST00000393310 WEE2P0C1S8 567 aa8.43□□□□□ -1.06
LIMS1-203ENST00000393310 JMJD7P0C870 316 aa8.43□□□□□ -1.06
LIMS1-203ENST00000393310 ARP10275 920 aa8.43□□□□□ -1.06
LIMS1-203ENST00000393310 CSRP1P21291 193 aaKnown RBP8.43□□□□□ -1.06
LIMS1-203ENST00000393310 YWHAQP27348 245 aa8.43□□□□□ -1.06
LIMS1-203ENST00000393310 RHDQ02161 417 aa8.43□□□□□ -1.06
LIMS1-203ENST00000393310 SCRN1Q12765 414 aa8.43□□□□□ -1.06
LIMS1-203ENST00000393310 STILQ15468 1287 aa8.43□□□□□ -1.06
LIMS1-203ENST00000393310 NDUFA5Q16718 116 aa8.43□□□□□ -1.06
LIMS1-203ENST00000393310 HDXQ7Z353 690 aa8.43□□□□□ -1.06
LIMS1-203ENST00000393310 PCGF5Q86SE9 256 aa8.43□□□□□ -1.06
LIMS1-203ENST00000393310 SYT12Q8IV01 421 aa8.43□□□□□ -1.06
LIMS1-203ENST00000393310 ARL14Q8N4G2 192 aa8.43□□□□□ -1.06
LIMS1-203ENST00000393310 MAIP1Q8WWC4 291 aa8.43□□□□□ -1.06
LIMS1-203ENST00000393310 KCNB2Q92953 911 aa8.43□□□□□ -1.06
LIMS1-203ENST00000393310 SIPA1Q96FS4 1042 aa8.43□□□□□ -1.06
LIMS1-203ENST00000393310 ASB7Q9H672 318 aa8.43□□□□□ -1.06
LIMS1-203ENST00000393310 AGPAT5Q9NUQ2 364 aa8.43□□□□□ -1.06
LIMS1-203ENST00000393310 SH3GLB1Q9Y371 365 aa8.43□□□□□ -1.06
LIMS1-203ENST00000393310 MUC6Q6W4X9 2439 aa8.42□□□□□ -1.06
LIMS1-203ENST00000393310 ANKRD31Q8N7Z5 1873 aa8.42□□□□□ -1.06
LIMS1-203ENST00000393310 LCHNA4D1U4 455 aa8.42□□□□□ -1.06
LIMS1-203ENST00000393310 FECHP22830 423 aa8.42□□□□□ -1.06
LIMS1-203ENST00000393310 HTR1BP28222 390 aa8.42□□□□□ -1.06
LIMS1-203ENST00000393310 S100A5P33763 92 aa8.42□□□□□ -1.06
LIMS1-203ENST00000393310 GRK6P43250 576 aa8.42□□□□□ -1.06
LIMS1-203ENST00000393310 TNFRSF4P43489 277 aa8.42□□□□□ -1.06
LIMS1-203ENST00000393310 KRT83P78385 493 aa8.42□□□□□ -1.06
LIMS1-203ENST00000393310 RUNX3Q13761 415 aa8.42□□□□□ -1.06
LIMS1-203ENST00000393310 RRP1BQ14684 758 aaKnown RBP8.42□□□□□ -1.06
LIMS1-203ENST00000393310 RASA2Q15283 850 aa8.42□□□□□ -1.06
LIMS1-203ENST00000393310 KBTBD6Q86V97 674 aa8.42□□□□□ -1.06
LIMS1-203ENST00000393310 DIS3L2Q8IYB7 885 aaKnown RBP8.42□□□□□ -1.06
LIMS1-203ENST00000393310 SLC44A3Q8N4M1 653 aa8.42□□□□□ -1.06
LIMS1-203ENST00000393310 AHCYL2Q96HN2 611 aaKnown RBP8.42□□□□□ -1.06
LIMS1-203ENST00000393310 DEPDC7Q96QD5 511 aa8.42□□□□□ -1.06
LIMS1-203ENST00000393310 ESYT1Q9BSJ8 1104 aa8.42□□□□□ -1.06
LIMS1-203ENST00000393310 CCDC28BQ9BUN5 200 aa8.42□□□□□ -1.06
LIMS1-203ENST00000393310 DNAAF2Q9NVR5 837 aaKnown RBP8.42□□□□□ -1.06
LIMS1-203ENST00000393310 EPS15L1Q9UBC2 864 aa8.42□□□□□ -1.06
LIMS1-203ENST00000393310 TTLL3Q9Y4R7 772 aa8.42□□□□□ -1.06
LIMS1-203ENST00000393310 TCRBV5S4A2TA0A5A2 114 aa8.42□□□□□ -1.06
LIMS1-203ENST00000393310 FAM47DPA6NHR8 397 aa8.42□□□□□ -1.06
LIMS1-203ENST00000393310 RASA4BC9J798 803 aa8.42□□□□□ -1.06
LIMS1-203ENST00000393310 MEIS2O14770 477 aa8.42□□□□□ -1.06
LIMS1-203ENST00000393310 ATP2C2O75185 946 aa8.42□□□□□ -1.06
LIMS1-203ENST00000393310 RECQL4O94761 1208 aa8.42□□□□□ -1.06
LIMS1-203ENST00000393310 S100A6P06703 90 aa8.42□□□□□ -1.06
LIMS1-203ENST00000393310 HOXB2P14652 356 aa8.42□□□□□ -1.06
LIMS1-203ENST00000393310 CCNHP51946 323 aaPredicted RBP8.42□□□□□ -1.06
LIMS1-203ENST00000393310 TUBB4BP68371 445 aa8.42□□□□□ -1.06
LIMS1-203ENST00000393310 PDAP1Q13442 181 aaKnown RBP8.42□□□□□ -1.06
LIMS1-203ENST00000393310 VSTM1Q6UX27 236 aa8.42□□□□□ -1.06
LIMS1-203ENST00000393310 UNC45BQ8IWX7 931 aa8.42□□□□□ -1.06
LIMS1-203ENST00000393310 AVL9Q8NBF6 648 aa8.42□□□□□ -1.06
LIMS1-203ENST00000393310 WDR60Q8WVS4 1066 aa8.42□□□□□ -1.06
LIMS1-203ENST00000393310 LRRC2Q9BYS8 371 aa8.42□□□□□ -1.06
LIMS1-203ENST00000393310 ELOVL2Q9NXB9 296 aa8.42□□□□□ -1.06
LIMS1-203ENST00000393310 IGKV6D-41A0A0C4DH26 115 aa8.42□□□□□ -1.06
LIMS1-203ENST00000393310 FAM25EA8MYX2 175 aa8.42□□□□□ -1.06
LIMS1-203ENST00000393310 LOC730098B7Z3J9 87 aa8.42□□□□□ -1.06
LIMS1-203ENST00000393310 OGTO15294 1046 aa8.42□□□□□ -1.06
LIMS1-203ENST00000393310 FLRT2O43155 660 aa8.42□□□□□ -1.06
LIMS1-203ENST00000393310 TOM1L1O75674 476 aa8.42□□□□□ -1.06
LIMS1-203ENST00000393310 ZNF3P17036 446 aa8.42□□□□□ -1.06
LIMS1-203ENST00000393310 SCNN1AP37088 669 aa8.42□□□□□ -1.06
LIMS1-203ENST00000393310 MAPK9P45984 424 aa8.42□□□□□ -1.06
LIMS1-203ENST00000393310 CACNB1Q02641 598 aaPredicted RBP8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms