RNA–Protein interactions for RNA: ENST00000393119.6

MKS1-202, Transcript of Meckel syndrome, type 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MKS1, Length 2,397 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-202ENST00000393119 TTC3P53804 2025 aa15.59■□□□□ 0.09
MKS1-202ENST00000393119 RANBP2P49792 3224 aaKnown RBP15.58■□□□□ 0.09
MKS1-202ENST00000393119 FAM72CH0Y354 149 aa15.58■□□□□ 0.09
MKS1-202ENST00000393119 GOLGA8MH3BSY2 632 aa15.58■□□□□ 0.09
MKS1-202ENST00000393119 BANF1O75531 89 aa15.58■□□□□ 0.09
MKS1-202ENST00000393119 GOT1P17174 413 aa15.58■□□□□ 0.09
MKS1-202ENST00000393119 SLC11A1P49279 550 aa15.58■□□□□ 0.09
MKS1-202ENST00000393119 DRG2P55039 364 aaKnown RBP15.58■□□□□ 0.09
MKS1-202ENST00000393119 SLC10A2Q12908 348 aaPredicted RBP15.58■□□□□ 0.09
MKS1-202ENST00000393119 ACAP1Q15027 740 aa15.58■□□□□ 0.09
MKS1-202ENST00000393119 DDR2Q16832 855 aa15.58■□□□□ 0.09
MKS1-202ENST00000393119 ANKRD20A8PQ5CZ79 823 aa15.58■□□□□ 0.09
MKS1-202ENST00000393119 CEP85LQ5SZL2 805 aa15.58■□□□□ 0.09
MKS1-202ENST00000393119 FAM72AQ5TYM5 149 aa15.58■□□□□ 0.09
MKS1-202ENST00000393119 FAM72DQ6L9T8 149 aa15.58■□□□□ 0.09
MKS1-202ENST00000393119 FAM72BQ86X60 149 aa15.58■□□□□ 0.09
MKS1-202ENST00000393119 ZDHHC17Q8IUH5 632 aa15.58■□□□□ 0.09
MKS1-202ENST00000393119 ABI1Q8IZP0 508 aa15.58■□□□□ 0.09
MKS1-202ENST00000393119 MREGQ8N565 214 aa15.58■□□□□ 0.09
MKS1-202ENST00000393119 PLD5Q8N7P1 536 aa15.58■□□□□ 0.09
MKS1-202ENST00000393119 SLC7A14Q8TBB6 771 aa15.58■□□□□ 0.09
MKS1-202ENST00000393119 SPATA18Q8TC71 538 aa15.58■□□□□ 0.09
MKS1-202ENST00000393119 KCTD13Q8WZ19 329 aa15.58■□□□□ 0.09
MKS1-202ENST00000393119 SMARCD1Q96GM5 515 aa15.58■□□□□ 0.09
MKS1-202ENST00000393119 RNF157Q96PX1 679 aa15.58■□□□□ 0.09
MKS1-202ENST00000393119 ABI2Q9NYB9 513 aaPredicted RBP15.58■□□□□ 0.09
MKS1-202ENST00000393119 TBKBP1A7MCY6 615 aa15.58■□□□□ 0.08
MKS1-202ENST00000393119 INPPL1O15357 1258 aa15.58■□□□□ 0.08
MKS1-202ENST00000393119 NCAM1P13591 858 aa15.58■□□□□ 0.08
MKS1-202ENST00000393119 ATF2P15336 505 aa15.58■□□□□ 0.08
MKS1-202ENST00000393119 PTPN7P35236 360 aa15.58■□□□□ 0.08
MKS1-202ENST00000393119 PTPN9P43378 593 aa15.58■□□□□ 0.08
MKS1-202ENST00000393119 GBE1Q04446 702 aa15.58■□□□□ 0.08
MKS1-202ENST00000393119 GPS1Q13098 491 aa15.58■□□□□ 0.08
MKS1-202ENST00000393119 ERMARDQ5T6L9 678 aa15.58■□□□□ 0.08
MKS1-202ENST00000393119 FAM171A1Q5VUB5 890 aa15.58■□□□□ 0.08
MKS1-202ENST00000393119 IZUMO3Q5VZ72 239 aa15.58■□□□□ 0.08
MKS1-202ENST00000393119 SCN4BQ8IWT1 228 aa15.58■□□□□ 0.08
MKS1-202ENST00000393119 URGCPQ8TCY9 931 aa15.58■□□□□ 0.08
MKS1-202ENST00000393119 MAK16Q9BXY0 300 aaKnown RBP15.58■□□□□ 0.08
MKS1-202ENST00000393119 MARCH5Q9NX47 278 aa15.58■□□□□ 0.08
MKS1-202ENST00000393119 AP4E1Q9UPM8 1137 aa15.58■□□□□ 0.08
MKS1-202ENST00000393119 SMIM23A6NLE4 172 aa15.57■□□□□ 0.08
MKS1-202ENST00000393119 PPFIA2O75334 1257 aa15.57■□□□□ 0.08
MKS1-202ENST00000393119 GAS8O95995 478 aa15.57■□□□□ 0.08
MKS1-202ENST00000393119 AMPD1P23109 780 aa15.57■□□□□ 0.08
MKS1-202ENST00000393119 PMS2P54278 862 aa15.57■□□□□ 0.08
MKS1-202ENST00000393119 EIF3EP60228 445 aaKnown RBP15.57■□□□□ 0.08
MKS1-202ENST00000393119 SLC29A2Q14542 456 aa15.57■□□□□ 0.08
MKS1-202ENST00000393119 RAB41Q5JT25 222 aa15.57■□□□□ 0.08
MKS1-202ENST00000393119 EFHC1Q5JVL4 640 aa15.57■□□□□ 0.08
MKS1-202ENST00000393119 SMYD5Q6GMV2 418 aa15.57■□□□□ 0.08
MKS1-202ENST00000393119 RHBDF2Q6PJF5 856 aa15.57■□□□□ 0.08
MKS1-202ENST00000393119 CRIPAKQ8N1N5 446 aa15.57■□□□□ 0.08
MKS1-202ENST00000393119 ATAD1Q8NBU5 361 aa15.57■□□□□ 0.08
MKS1-202ENST00000393119 SNF8Q96H20 258 aa15.57■□□□□ 0.08
MKS1-202ENST00000393119 ANAPC5Q9UJX4 755 aa15.57■□□□□ 0.08
MKS1-202ENST00000393119 TCRBV7S3A2A0A539 114 aa15.57■□□□□ 0.08
MKS1-202ENST00000393119 DCDC2CA8MYV0 355 aa15.57■□□□□ 0.08
MKS1-202ENST00000393119 F5H423 210 aaPredicted RBP15.57■□□□□ 0.08
MKS1-202ENST00000393119 ZBED1O96006 694 aa15.57■□□□□ 0.08
MKS1-202ENST00000393119 GRIK1P39086 918 aa15.57■□□□□ 0.08
MKS1-202ENST00000393119 ZNF844Q08AG5 666 aa15.57■□□□□ 0.08
MKS1-202ENST00000393119 CALCOCO2Q13137 446 aa15.57■□□□□ 0.08
MKS1-202ENST00000393119 SLC25A52Q3SY17 297 aa15.57■□□□□ 0.08
MKS1-202ENST00000393119 ANKRD22Q5VYY1 191 aa15.57■□□□□ 0.08
MKS1-202ENST00000393119 TTC19Q6DKK2 380 aaPredicted RBP15.57■□□□□ 0.08
MKS1-202ENST00000393119 SEPT8Q92599 483 aa15.57■□□□□ 0.08
MKS1-202ENST00000393119 MYCBPQ99417 103 aaPredicted RBP15.57■□□□□ 0.08
MKS1-202ENST00000393119 NPY6RQ99463 290 aa15.57■□□□□ 0.08
MKS1-202ENST00000393119 SH3GL2Q99962 352 aa15.57■□□□□ 0.08
MKS1-202ENST00000393119 FTHL17Q9BXU8 183 aa15.57■□□□□ 0.08
MKS1-202ENST00000393119 LRFN2Q9ULH4 789 aa15.57■□□□□ 0.08
MKS1-202ENST00000393119 SLC27A5Q9Y2P5 690 aa15.57■□□□□ 0.08
MKS1-202ENST00000393119 FOXO6A8MYZ6 492 aa15.56■□□□□ 0.08
MKS1-202ENST00000393119 CAPN9O14815 690 aa15.56■□□□□ 0.08
MKS1-202ENST00000393119 RBP3P10745 1247 aa15.56■□□□□ 0.08
MKS1-202ENST00000393119 BOLA3Q53S33 107 aa15.56■□□□□ 0.08
MKS1-202ENST00000393119 RTP2Q5QGT7 225 aa15.56■□□□□ 0.08
MKS1-202ENST00000393119 VARS2Q5ST30 1063 aaKnown RBP15.56■□□□□ 0.08
MKS1-202ENST00000393119 EIF1ADQ8N9N8 165 aaKnown RBP15.56■□□□□ 0.08
MKS1-202ENST00000393119 GRK7Q8WTQ7 553 aa15.56■□□□□ 0.08
MKS1-202ENST00000393119 UROC1Q96N76 676 aa15.56■□□□□ 0.08
MKS1-202ENST00000393119 CRISPLD1Q9H336 500 aa15.56■□□□□ 0.08
MKS1-202ENST00000393119 POPDC2Q9HBU9 364 aa15.56■□□□□ 0.08
MKS1-202ENST00000393119 CSNK1G1Q9HCP0 422 aa15.56■□□□□ 0.08
MKS1-202ENST00000393119 PCDHB8Q9UN66 801 aa15.56■□□□□ 0.08
MKS1-202ENST00000393119 ANKRD65E5RJM6 399 aa15.56■□□□□ 0.08
MKS1-202ENST00000393119 CREB3O43889 395 aa15.56■□□□□ 0.08
MKS1-202ENST00000393119 DAB1O75553 588 aa15.56■□□□□ 0.08
MKS1-202ENST00000393119 ACSL3O95573 720 aa15.56■□□□□ 0.08
MKS1-202ENST00000393119 FAM163BP0C2L3 166 aa15.56■□□□□ 0.08
MKS1-202ENST00000393119 FASTKD3Q14CZ7 662 aaKnown RBP15.56■□□□□ 0.08
MKS1-202ENST00000393119 ALS2CLQ60I27 953 aa15.56■□□□□ 0.08
MKS1-202ENST00000393119 NKD2Q969F2 451 aaPredicted RBP15.56■□□□□ 0.08
MKS1-202ENST00000393119 SLC2A13Q96QE2 648 aa15.56■□□□□ 0.08
MKS1-202ENST00000393119 TSC2P49815 1807 aa15.56■□□□□ 0.08
MKS1-202ENST00000393119 KIAA0100Q14667 2235 aaKnown RBP15.56■□□□□ 0.08
MKS1-202ENST00000393119 APOC4-APOC2K7ER74 178 aa15.55■□□□□ 0.08
MKS1-202ENST00000393119 PITPNM1O00562 1244 aa15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms