RNA–Protein interactions for RNA: ENST00000393043.5

CLTC-202, Transcript of clathrin heavy chain, humanhuman

TSL 1 (best) BASIC

Gene CLTC, Length 5,292 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTC-202ENST00000393043 CRLS1Q9UJA2 301 aa13.03□□□□□ -0.32
CLTC-202ENST00000393043 USP20Q9Y2K6 914 aa13.03□□□□□ -0.32
CLTC-202ENST00000393043 ACOT9Q9Y305 439 aa13.03□□□□□ -0.32
CLTC-202ENST00000393043 ABCC6O95255 1503 aa13.03□□□□□ -0.32
CLTC-202ENST00000393043 RBP1P09455 135 aa13.03□□□□□ -0.32
CLTC-202ENST00000393043 ELK3P41970 407 aa13.03□□□□□ -0.32
CLTC-202ENST00000393043 OXCT1P55809 520 aa13.03□□□□□ -0.32
CLTC-202ENST00000393043 CYB5D1Q6P9G0 228 aa13.03□□□□□ -0.32
CLTC-202ENST00000393043 TMEM86AQ8N2M4 240 aa13.03□□□□□ -0.32
CLTC-202ENST00000393043 DNPEPQ9ULA0 475 aa13.03□□□□□ -0.32
CLTC-202ENST00000393043 VANGL2Q9ULK5 521 aa13.03□□□□□ -0.32
CLTC-202ENST00000393043 UMODL1Q5DID0 1318 aa13.03□□□□□ -0.32
CLTC-202ENST00000393043 LOC100653049A0A140TA62 436 aa13.03□□□□□ -0.32
CLTC-202ENST00000393043 TGFB1I1O43294 461 aa13.03□□□□□ -0.32
CLTC-202ENST00000393043 KRT34O76011 436 aa13.03□□□□□ -0.32
CLTC-202ENST00000393043 THRAP10827 490 aa13.03□□□□□ -0.32
CLTC-202ENST00000393043 AKAP5P24588 427 aa13.03□□□□□ -0.32
CLTC-202ENST00000393043 DNAJB2P25686 324 aa13.03□□□□□ -0.32
CLTC-202ENST00000393043 TARSP26639 723 aaKnown RBP13.03□□□□□ -0.32
CLTC-202ENST00000393043 SCTRP47872 440 aa13.03□□□□□ -0.32
CLTC-202ENST00000393043 POU4F1Q01851 419 aa13.03□□□□□ -0.32
CLTC-202ENST00000393043 EME1Q96AY2 570 aa13.03□□□□□ -0.32
CLTC-202ENST00000393043 PDGFCQ9NRA1 345 aa13.03□□□□□ -0.32
CLTC-202ENST00000393043 PKD2L2Q9NZM6 624 aa13.03□□□□□ -0.32
CLTC-202ENST00000393043 CASTOR2A6NHX0 329 aa13.02□□□□□ -0.32
CLTC-202ENST00000393043 VPS26AO75436 327 aa13.02□□□□□ -0.32
CLTC-202ENST00000393043 SASH3O75995 380 aa13.02□□□□□ -0.32
CLTC-202ENST00000393043 ASMTLO95671 621 aa13.02□□□□□ -0.32
CLTC-202ENST00000393043 SKOR1P84550 965 aa13.02□□□□□ -0.32
CLTC-202ENST00000393043 POLD3Q15054 466 aaPredicted RBP13.02□□□□□ -0.32
CLTC-202ENST00000393043 ZACNQ401N2 412 aa13.02□□□□□ -0.32
CLTC-202ENST00000393043 ARSHQ5FYA8 562 aa13.02□□□□□ -0.32
CLTC-202ENST00000393043 IL31RAQ8NI17 732 aa13.02□□□□□ -0.32
CLTC-202ENST00000393043 LRRC39Q96DD0 335 aa13.02□□□□□ -0.32
CLTC-202ENST00000393043 UBXN6Q9BZV1 441 aa13.02□□□□□ -0.32
CLTC-202ENST00000393043 STX18Q9P2W9 335 aaKnown RBP13.02□□□□□ -0.32
CLTC-202ENST00000393043 RUVBL2Q9Y230 463 aaKnown RBP13.02□□□□□ -0.32
CLTC-202ENST00000393043 DCDC2CA8MYV0 355 aa13.02□□□□□ -0.33
CLTC-202ENST00000393043 PDE2AO00408 941 aaPredicted RBP13.02□□□□□ -0.33
CLTC-202ENST00000393043 ADCYAP1R1P41586 468 aa13.02□□□□□ -0.33
CLTC-202ENST00000393043 EFEMP1Q12805 493 aa13.02□□□□□ -0.33
CLTC-202ENST00000393043 CDH17Q12864 832 aa13.02□□□□□ -0.33
CLTC-202ENST00000393043 MAMLD1Q13495 774 aa13.02□□□□□ -0.33
CLTC-202ENST00000393043 FAM117BQ6P1L5 589 aa13.02□□□□□ -0.33
CLTC-202ENST00000393043 DACT3Q96B18 629 aaPredicted RBP13.02□□□□□ -0.33
CLTC-202ENST00000393043 EIF2AQ9BY44 585 aaKnown RBP13.02□□□□□ -0.33
CLTC-202ENST00000393043 NOD2Q9HC29 1040 aa13.02□□□□□ -0.33
CLTC-202ENST00000393043 TAS2R14Q9NYV8 317 aa13.02□□□□□ -0.33
CLTC-202ENST00000393043 LMO7Q8WWI1 1683 aa13.02□□□□□ -0.33
CLTC-202ENST00000393043 NRCAMQ92823 1304 aa13.02□□□□□ -0.33
CLTC-202ENST00000393043 LTN1O94822 1766 aa13.02□□□□□ -0.33
CLTC-202ENST00000393043 CRTAMO95727 393 aa13.02□□□□□ -0.33
CLTC-202ENST00000393043 GHRP10912 638 aa13.02□□□□□ -0.33
CLTC-202ENST00000393043 CDH2P19022 906 aaPredicted RBP13.02□□□□□ -0.33
CLTC-202ENST00000393043 CALB2P22676 271 aa13.02□□□□□ -0.33
CLTC-202ENST00000393043 DRG2P55039 364 aaKnown RBP13.02□□□□□ -0.33
CLTC-202ENST00000393043 PTK2BQ14289 1009 aa13.02□□□□□ -0.33
CLTC-202ENST00000393043 TMEM132BQ14DG7 1078 aa13.02□□□□□ -0.33
CLTC-202ENST00000393043 TRIP10Q15642 601 aa13.02□□□□□ -0.33
CLTC-202ENST00000393043 ECM1Q16610 540 aa13.02□□□□□ -0.33
CLTC-202ENST00000393043 PAN2Q504Q3 1202 aaKnown RBP13.02□□□□□ -0.33
CLTC-202ENST00000393043 IRF2BP2Q7Z5L9 587 aa13.02□□□□□ -0.33
CLTC-202ENST00000393043 MREGQ8N565 214 aa13.02□□□□□ -0.33
CLTC-202ENST00000393043 CEP19Q96LK0 163 aa13.02□□□□□ -0.33
CLTC-202ENST00000393043 YIPF3Q9GZM5 350 aa13.02□□□□□ -0.33
CLTC-202ENST00000393043 ELOVL4Q9GZR5 314 aa13.02□□□□□ -0.33
CLTC-202ENST00000393043 DMAP1Q9NPF5 467 aaPredicted RBP13.02□□□□□ -0.33
CLTC-202ENST00000393043 TRPV2Q9Y5S1 764 aa13.02□□□□□ -0.33
CLTC-202ENST00000393043 SLC12A8A0AV02 714 aa13.02□□□□□ -0.33
CLTC-202ENST00000393043 HEATR9A2RTY3 570 aa13.02□□□□□ -0.33
CLTC-202ENST00000393043 PRPF4O43172 522 aaKnown RBP eCLIP13.02□□□□□ -0.336e-11■■■■□ 23.4
CLTC-202ENST00000393043 AKAP10O43572 662 aa13.02□□□□□ -0.33
CLTC-202ENST00000393043 CPA3P15088 417 aa13.02□□□□□ -0.33
CLTC-202ENST00000393043 DYNC1I2Q13409 638 aaKnown RBP13.02□□□□□ -0.33
CLTC-202ENST00000393043 MAP1SQ66K74 1059 aaPredicted RBP13.02□□□□□ -0.33
CLTC-202ENST00000393043 PHF13Q86YI8 300 aaPredicted RBP13.02□□□□□ -0.33
CLTC-202ENST00000393043 IRF2BP1Q8IU81 584 aa13.02□□□□□ -0.33
CLTC-202ENST00000393043 SLC2A14Q8TDB8 520 aa13.02□□□□□ -0.33
CLTC-202ENST00000393043 MRPS31Q92665 395 aaKnown RBP13.02□□□□□ -0.33
CLTC-202ENST00000393043 SGF29Q96ES7 293 aa13.02□□□□□ -0.33
CLTC-202ENST00000393043 VAT1Q99536 393 aa13.02□□□□□ -0.33
CLTC-202ENST00000393043 FICDQ9BVA6 458 aa13.02□□□□□ -0.33
CLTC-202ENST00000393043 TLR8Q9NR97 1041 aaKnown RBP13.02□□□□□ -0.33
CLTC-202ENST00000393043 SUPT7LO94864 414 aa13.01□□□□□ -0.33
CLTC-202ENST00000393043 MPOP05164 745 aa13.01□□□□□ -0.33
CLTC-202ENST00000393043 KDELR1P24390 212 aa13.01□□□□□ -0.33
CLTC-202ENST00000393043 NPY2RP49146 381 aa13.01□□□□□ -0.33
CLTC-202ENST00000393043 NAB1Q13506 487 aa13.01□□□□□ -0.33
CLTC-202ENST00000393043 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.01□□□□□ -0.33
CLTC-202ENST00000393043 RXFP1Q9HBX9 757 aa13.01□□□□□ -0.33
CLTC-202ENST00000393043 SYTL2Q9HCH5 934 aa13.01□□□□□ -0.33
CLTC-202ENST00000393043 STARD7Q9NQZ5 370 aa13.01□□□□□ -0.33
CLTC-202ENST00000393043 CHST7Q9NS84 486 aa13.01□□□□□ -0.33
CLTC-202ENST00000393043 PCDHB5Q9Y5E4 795 aa13.01□□□□□ -0.33
CLTC-202ENST00000393043 PLIN4Q96Q06 1357 aa13.01□□□□□ -0.33
CLTC-202ENST00000393043 E5RJQ4 531 aa13.01□□□□□ -0.33
CLTC-202ENST00000393043 ALDH2P05091 517 aa13.01□□□□□ -0.33
CLTC-202ENST00000393043 PTPN7P35236 360 aa13.01□□□□□ -0.33
CLTC-202ENST00000393043 GP5P40197 560 aa13.01□□□□□ -0.33
CLTC-202ENST00000393043 SCUBE3Q8IX30 993 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms