RNA–Protein interactions for RNA: ENST00000391855.2

GGPS1-203, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

TSL 2 BASIC

Gene GGPS1, Length 1,407 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-203ENST00000391855 PLD4Q96BZ4 506 aa13.28□□□□□ -0.28
GGPS1-203ENST00000391855 NOX5Q96PH1 765 aa13.28□□□□□ -0.28
GGPS1-203ENST00000391855 PLCB1Q9NQ66 1216 aa13.28□□□□□ -0.28
GGPS1-203ENST00000391855 RBM12Q9NTZ6 932 aaKnown RBP13.28□□□□□ -0.28
GGPS1-203ENST00000391855 FAM86C1Q9NVL1 165 aa13.28□□□□□ -0.28
GGPS1-203ENST00000391855 MARK1Q9P0L2 795 aa13.28□□□□□ -0.28
GGPS1-203ENST00000391855 PCDHGC3Q9UN70 934 aa13.28□□□□□ -0.28
GGPS1-203ENST00000391855 HBS1LQ9Y450 684 aaKnown RBP13.28□□□□□ -0.28
GGPS1-203ENST00000391855 PCDHGA2Q9Y5H1 932 aa13.28□□□□□ -0.28
GGPS1-203ENST00000391855 CACNA1HO95180 2353 aa13.28□□□□□ -0.28
GGPS1-203ENST00000391855 CHURC1-FNTBB4DL54 471 aa13.27□□□□□ -0.29
GGPS1-203ENST00000391855 MDM4O15151 490 aa13.27□□□□□ -0.29
GGPS1-203ENST00000391855 GREM1O60565 184 aa13.27□□□□□ -0.29
GGPS1-203ENST00000391855 STC2O76061 302 aa13.27□□□□□ -0.29
GGPS1-203ENST00000391855 OPRD1P41143 372 aa13.27□□□□□ -0.29
GGPS1-203ENST00000391855 GPD2P43304 727 aa13.27□□□□□ -0.29
GGPS1-203ENST00000391855 RGS7P49802 495 aa13.27□□□□□ -0.29
GGPS1-203ENST00000391855 SNX16P57768 344 aa13.27□□□□□ -0.29
GGPS1-203ENST00000391855 CSTF1Q05048 431 aaKnown RBP13.27□□□□□ -0.29
GGPS1-203ENST00000391855 KLHL40Q2TBA0 621 aa13.27□□□□□ -0.29
GGPS1-203ENST00000391855 LY6G5CQ5SRR4 150 aa13.27□□□□□ -0.29
GGPS1-203ENST00000391855 KLHDC7AQ5VTJ3 777 aa13.27□□□□□ -0.29
GGPS1-203ENST00000391855 BSPRYQ5W0U4 402 aa13.27□□□□□ -0.29
GGPS1-203ENST00000391855 CAVIN1Q6NZI2 390 aaKnown RBP13.27□□□□□ -0.29
GGPS1-203ENST00000391855 MSANTD2Q6P1R3 559 aa13.27□□□□□ -0.29
GGPS1-203ENST00000391855 RHBDF2Q6PJF5 856 aa13.27□□□□□ -0.29
GGPS1-203ENST00000391855 Q6ZNB5 142 aa13.27□□□□□ -0.29
GGPS1-203ENST00000391855 NUDT18Q6ZVK8 323 aa13.27□□□□□ -0.29
GGPS1-203ENST00000391855 MIB1Q86YT6 1006 aa13.27□□□□□ -0.29
GGPS1-203ENST00000391855 NELL1Q92832 810 aa13.27□□□□□ -0.29
GGPS1-203ENST00000391855 PNKPQ96T60 521 aa13.27□□□□□ -0.29
GGPS1-203ENST00000391855 BPIFA3Q9BQP9 254 aa13.27□□□□□ -0.29
GGPS1-203ENST00000391855 LSM14BQ9BX40 385 aaKnown RBP13.27□□□□□ -0.29
GGPS1-203ENST00000391855 SPHK2Q9NRA0 654 aa13.27□□□□□ -0.29
GGPS1-203ENST00000391855 FANCLQ9NW38 375 aa13.27□□□□□ -0.29
GGPS1-203ENST00000391855 ZSCAN32Q9NX65 697 aa13.27□□□□□ -0.29
GGPS1-203ENST00000391855 WDR35Q9P2L0 1181 aa13.27□□□□□ -0.29
GGPS1-203ENST00000391855 NUDT5Q9UKK9 219 aa13.27□□□□□ -0.29
GGPS1-203ENST00000391855 CEP83Q9Y592 693 aa13.27□□□□□ -0.29
GGPS1-203ENST00000391855 SLC12A8A0AV02 714 aa13.26□□□□□ -0.29
GGPS1-203ENST00000391855 YJEFN3A6XGL0 299 aa13.26□□□□□ -0.29
GGPS1-203ENST00000391855 E7ENQ6 273 aa13.26□□□□□ -0.29
GGPS1-203ENST00000391855 EGFP01133 1207 aa13.26□□□□□ -0.29
GGPS1-203ENST00000391855 LTFP02788 710 aa13.26□□□□□ -0.29
GGPS1-203ENST00000391855 CHKAP35790 457 aa13.26□□□□□ -0.29
GGPS1-203ENST00000391855 ZNF445P59923 1031 aa13.26□□□□□ -0.29
GGPS1-203ENST00000391855 KCNMA1Q12791 1236 aa13.26□□□□□ -0.29
GGPS1-203ENST00000391855 GAS6Q14393 721 aa13.26□□□□□ -0.29
GGPS1-203ENST00000391855 GAB4Q2WGN9 574 aa13.26□□□□□ -0.29
GGPS1-203ENST00000391855 DENND1BQ6P3S1 775 aa13.26□□□□□ -0.29
GGPS1-203ENST00000391855 Q6ZS52 159 aa13.26□□□□□ -0.29
GGPS1-203ENST00000391855 BEND5Q7L4P6 421 aa13.26□□□□□ -0.29
GGPS1-203ENST00000391855 FAM71AQ8IYT1 594 aa13.26□□□□□ -0.29
GGPS1-203ENST00000391855 NKD2Q969F2 451 aaPredicted RBP13.26□□□□□ -0.29
GGPS1-203ENST00000391855 XPO6Q96QU8 1125 aaKnown RBP13.26□□□□□ -0.29
GGPS1-203ENST00000391855 SLC4A5Q9BY07 1137 aa13.26□□□□□ -0.29
GGPS1-203ENST00000391855 VPS16Q9H269 839 aa13.26□□□□□ -0.29
GGPS1-203ENST00000391855 LHX5Q9H2C1 402 aa13.26□□□□□ -0.29
GGPS1-203ENST00000391855 ST7Q9NRC1 585 aa13.26□□□□□ -0.29
GGPS1-203ENST00000391855 LIMA1Q9UHB6 759 aaKnown RBP13.26□□□□□ -0.29
GGPS1-203ENST00000391855 SMTNL1A8MU46 457 aa13.25□□□□□ -0.29
GGPS1-203ENST00000391855 SCAMP3O14828 347 aaKnown RBP13.25□□□□□ -0.29
GGPS1-203ENST00000391855 RNF40O75150 1001 aa13.25□□□□□ -0.29
GGPS1-203ENST00000391855 LATS1O95835 1130 aa13.25□□□□□ -0.29
GGPS1-203ENST00000391855 APODP05090 189 aa13.25□□□□□ -0.29
GGPS1-203ENST00000391855 TDGF1P13385 188 aa13.25□□□□□ -0.29
GGPS1-203ENST00000391855 UCHL3P15374 230 aa13.25□□□□□ -0.29
GGPS1-203ENST00000391855 ZNF18P17022 549 aa13.25□□□□□ -0.29
GGPS1-203ENST00000391855 CDK11BP21127 795 aaKnown RBP13.25□□□□□ -0.29
GGPS1-203ENST00000391855 HOXA6P31267 233 aa13.25□□□□□ -0.29
GGPS1-203ENST00000391855 MRE11P49959 708 aa13.25□□□□□ -0.29
GGPS1-203ENST00000391855 COPB1P53618 953 aaKnown RBP13.25□□□□□ -0.29
GGPS1-203ENST00000391855 APBA1Q02410 837 aa13.25□□□□□ -0.29
GGPS1-203ENST00000391855 PDCLQ13371 301 aa13.25□□□□□ -0.29
GGPS1-203ENST00000391855 RAPGEF1Q13905 1077 aa13.25□□□□□ -0.29
GGPS1-203ENST00000391855 DRAP1Q14919 205 aaPredicted RBP13.25□□□□□ -0.29
GGPS1-203ENST00000391855 TRIP4Q15650 581 aaPredicted RBP13.25□□□□□ -0.29
GGPS1-203ENST00000391855 ANO4Q32M45 955 aa13.25□□□□□ -0.29
GGPS1-203ENST00000391855 HSF5Q4G112 596 aaPredicted RBP13.25□□□□□ -0.29
GGPS1-203ENST00000391855 DPY19L2P1Q6NXN4 242 aa13.25□□□□□ -0.29
GGPS1-203ENST00000391855 TMEM110Q86TL2 294 aa13.25□□□□□ -0.29
GGPS1-203ENST00000391855 ETFBKMTQ8IXQ9 262 aa13.25□□□□□ -0.29
GGPS1-203ENST00000391855 ZBTB44Q8NCP5 570 aa13.25□□□□□ -0.29
GGPS1-203ENST00000391855 ATRIPQ8WXE1 791 aa13.25□□□□□ -0.29
GGPS1-203ENST00000391855 WBP2Q969T9 261 aa13.25□□□□□ -0.29
GGPS1-203ENST00000391855 NAA15Q9BXJ9 866 aaKnown RBP13.25□□□□□ -0.29
GGPS1-203ENST00000391855 STK33Q9BYT3 514 aa13.25□□□□□ -0.29
GGPS1-203ENST00000391855 FHOD1Q9Y613 1164 aa13.25□□□□□ -0.29
GGPS1-203ENST00000391855 LRRC10BA6NIK2 292 aa13.24□□□□□ -0.29
GGPS1-203ENST00000391855 LGALS16A8MUM7 142 aa13.24□□□□□ -0.29
GGPS1-203ENST00000391855 FOXN3O00409 490 aaPredicted RBP13.24□□□□□ -0.29
GGPS1-203ENST00000391855 CACNG3O60359 315 aa13.24□□□□□ -0.29
GGPS1-203ENST00000391855 KAT7O95251 611 aa13.24□□□□□ -0.29
GGPS1-203ENST00000391855 CALCAP01258 141 aa13.24□□□□□ -0.29
GGPS1-203ENST00000391855 CORO1AP31146 461 aaKnown RBP13.24□□□□□ -0.29
GGPS1-203ENST00000391855 KRT9P35527 623 aa13.24□□□□□ -0.29
GGPS1-203ENST00000391855 GRIA2P42262 883 aa13.24□□□□□ -0.29
GGPS1-203ENST00000391855 HARS2P49590 506 aaKnown RBP13.24□□□□□ -0.29
GGPS1-203ENST00000391855 MRPS21P82921 87 aaKnown RBP13.24□□□□□ -0.29
GGPS1-203ENST00000391855 SATB1Q01826 763 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms