RNA–Protein interactions for RNA: ENST00000390467.3

TRAV40-201, Transcript of T cell receptor alpha variable 40, humanhuman

APPRIS P1 BASIC

Gene TRAV40, Length 317 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV40-201ENST00000390467 COL15A1P39059 1388 aa4.02□□□□□ -1.77
TRAV40-201ENST00000390467 ZMYM2Q9UBW7 1377 aa4.02□□□□□ -1.77
TRAV40-201ENST00000390467 RRHO14718 337 aa4.01□□□□□ -1.77
TRAV40-201ENST00000390467 TLR2O60603 784 aa4.01□□□□□ -1.77
TRAV40-201ENST00000390467 CNOT3O75175 753 aaKnown RBP4.01□□□□□ -1.77
TRAV40-201ENST00000390467 POLGP54098 1239 aaPredicted RBP4.01□□□□□ -1.77
TRAV40-201ENST00000390467 TXNL4AP83876 142 aaKnown RBP4.01□□□□□ -1.77
TRAV40-201ENST00000390467 ID2Q02363 134 aa4.01□□□□□ -1.77
TRAV40-201ENST00000390467 MTAPQ13126 283 aa4.01□□□□□ -1.77
TRAV40-201ENST00000390467 KPNB1Q14974 876 aaKnown RBP4.01□□□□□ -1.77
TRAV40-201ENST00000390467 CLCA4Q14CN2 919 aa4.01□□□□□ -1.77
TRAV40-201ENST00000390467 C14orf80Q86SX3 495 aa4.01□□□□□ -1.77
TRAV40-201ENST00000390467 ZNF548Q8NEK5 533 aaPredicted RBP4.01□□□□□ -1.77
TRAV40-201ENST00000390467 SMCR8Q8TEV9 937 aaPredicted RBP4.01□□□□□ -1.77
TRAV40-201ENST00000390467 ZDHHC12Q96GR4 267 aa4.01□□□□□ -1.77
TRAV40-201ENST00000390467 FOXP1Q9H334 677 aaPredicted RBP4.01□□□□□ -1.77
TRAV40-201ENST00000390467 SAP30LQ9HAJ7 183 aa4.01□□□□□ -1.77
TRAV40-201ENST00000390467 TBC1D23Q9NUY8 699 aa4.01□□□□□ -1.77
TRAV40-201ENST00000390467 OBP2AQ9NY56 170 aa4.01□□□□□ -1.77
TRAV40-201ENST00000390467 HEY2Q9UBP5 337 aa4.01□□□□□ -1.77
TRAV40-201ENST00000390467 C16orf96A6NNT2 1141 aa4□□□□□ -1.77
TRAV40-201ENST00000390467 IKBKBO14920 756 aa4□□□□□ -1.77
TRAV40-201ENST00000390467 INMTO95050 263 aa4□□□□□ -1.77
TRAV40-201ENST00000390467 TMEM225BP0DP42 221 aa4□□□□□ -1.77
TRAV40-201ENST00000390467 CTSAP10619 480 aa4□□□□□ -1.77
TRAV40-201ENST00000390467 CD19P15391 556 aa4□□□□□ -1.77
TRAV40-201ENST00000390467 GALNSP34059 522 aa4□□□□□ -1.77
TRAV40-201ENST00000390467 RAE1P78406 368 aaKnown RBP4□□□□□ -1.77
TRAV40-201ENST00000390467 RRAGBQ5VZM2 374 aa4□□□□□ -1.77
TRAV40-201ENST00000390467 PPP4R4Q6NUP7 873 aa4□□□□□ -1.77
TRAV40-201ENST00000390467 ZNF517Q6ZMY9 492 aaPredicted RBP4□□□□□ -1.77
TRAV40-201ENST00000390467 DEF8Q6ZN54 512 aa4□□□□□ -1.77
TRAV40-201ENST00000390467 TFAP2DQ7Z6R9 452 aa4□□□□□ -1.77
TRAV40-201ENST00000390467 FSTL5Q8N475 847 aaPredicted RBP4□□□□□ -1.77
TRAV40-201ENST00000390467 DDX51Q8N8A6 666 aaKnown RBP eCLIP4□□□□□ -1.77
TRAV40-201ENST00000390467 MBD3L2Q8NHZ7 208 aaPredicted RBP4□□□□□ -1.77
TRAV40-201ENST00000390467 TTC8Q8TAM2 541 aa4□□□□□ -1.77
TRAV40-201ENST00000390467 TIFAQ96CG3 184 aa4□□□□□ -1.77
TRAV40-201ENST00000390467 TM2D2Q9BX73 214 aa4□□□□□ -1.77
TRAV40-201ENST00000390467 BTBD1Q9H0C5 482 aa4□□□□□ -1.77
TRAV40-201ENST00000390467 SEMA5BQ9P283 1151 aa4□□□□□ -1.77
TRAV40-201ENST00000390467 PI4KBQ9UBF8 816 aa4□□□□□ -1.77
TRAV40-201ENST00000390467 TCEAL9Q9UHQ7 104 aa4□□□□□ -1.77
TRAV40-201ENST00000390467 CORO2BQ9UQ03 480 aa4□□□□□ -1.77
TRAV40-201ENST00000390467 TTC3P53804 2025 aa4□□□□□ -1.77
TRAV40-201ENST00000390467 SNX2O60749 519 aa3.99□□□□□ -1.77
TRAV40-201ENST00000390467 CBFA2T3O75081 653 aa3.99□□□□□ -1.77
TRAV40-201ENST00000390467 WDR47O94967 919 aa3.99□□□□□ -1.77
TRAV40-201ENST00000390467 ANXA2P07355 339 aaKnown RBP3.99□□□□□ -1.77
TRAV40-201ENST00000390467 ARP10275 920 aa3.99□□□□□ -1.77
TRAV40-201ENST00000390467 RPS13P62277 151 aaKnown RBP3.99□□□□□ -1.77
TRAV40-201ENST00000390467 CCDC15Q0P6D6 951 aa3.99□□□□□ -1.77
TRAV40-201ENST00000390467 GFOD2Q3B7J2 385 aa3.99□□□□□ -1.77
TRAV40-201ENST00000390467 LEXMQ3ZCV2 418 aa3.99□□□□□ -1.77
TRAV40-201ENST00000390467 AASDHQ4L235 1098 aaPredicted RBP3.99□□□□□ -1.77
TRAV40-201ENST00000390467 TMEM63BQ5T3F8 832 aa3.99□□□□□ -1.77
TRAV40-201ENST00000390467 ANO7Q6IWH7 933 aa3.99□□□□□ -1.77
TRAV40-201ENST00000390467 MZT2AQ6P582 158 aa3.99□□□□□ -1.77
TRAV40-201ENST00000390467 ANKRD13BQ86YJ7 626 aa3.99□□□□□ -1.77
TRAV40-201ENST00000390467 P3H2Q8IVL5 708 aa3.99□□□□□ -1.77
TRAV40-201ENST00000390467 SUGP2Q8IX01 1082 aaKnown RBP eCLIP3.99□□□□□ -1.77
TRAV40-201ENST00000390467 SAMD14Q8IZD0 417 aaPredicted RBP3.99□□□□□ -1.77
TRAV40-201ENST00000390467 SUN3Q8TAQ9 357 aa3.99□□□□□ -1.77
TRAV40-201ENST00000390467 VPS50Q96JG6 964 aa3.99□□□□□ -1.77
TRAV40-201ENST00000390467 BRIP1Q9BX63 1249 aa3.99□□□□□ -1.77
TRAV40-201ENST00000390467 SLC25A32Q9H2D1 315 aa3.99□□□□□ -1.77
TRAV40-201ENST00000390467 EBF3Q9H4W6 596 aa3.99□□□□□ -1.77
TRAV40-201ENST00000390467 ZBTB40Q9NUA8 1239 aa3.99□□□□□ -1.77
TRAV40-201ENST00000390467 PCDHB2Q9Y5E7 798 aa3.99□□□□□ -1.77
TRAV40-201ENST00000390467 C2CD4BA6NLJ0 364 aa3.98□□□□□ -1.77
TRAV40-201ENST00000390467 INPPL1O15357 1258 aa3.98□□□□□ -1.77
TRAV40-201ENST00000390467 INSIG1O15503 277 aa3.98□□□□□ -1.77
TRAV40-201ENST00000390467 TOMM40O96008 361 aa3.98□□□□□ -1.77
TRAV40-201ENST00000390467 TMEM191BP0C7N4 346 aa3.98□□□□□ -1.77
TRAV40-201ENST00000390467 TMIGD3P0DMS9 266 aaPredicted RBP3.98□□□□□ -1.77
TRAV40-201ENST00000390467 PSG1P11464 419 aa3.98□□□□□ -1.77
TRAV40-201ENST00000390467 TNFRSF1BP20333 461 aa3.98□□□□□ -1.77
TRAV40-201ENST00000390467 TACR3P29371 465 aa3.98□□□□□ -1.77
TRAV40-201ENST00000390467 PBX1P40424 430 aa3.98□□□□□ -1.77
TRAV40-201ENST00000390467 WDR5P61964 334 aaKnown RBP3.98□□□□□ -1.77
TRAV40-201ENST00000390467 MTX1Q13505 466 aa3.98□□□□□ -1.77
TRAV40-201ENST00000390467 DNASE1L3Q13609 305 aa3.98□□□□□ -1.77
TRAV40-201ENST00000390467 RAPGEF1Q13905 1077 aa3.98□□□□□ -1.77
TRAV40-201ENST00000390467 ACOX1Q15067 660 aa3.98□□□□□ -1.77
TRAV40-201ENST00000390467 SLC9C1Q4G0N8 1177 aa3.98□□□□□ -1.77
TRAV40-201ENST00000390467 KLHDC7AQ5VTJ3 777 aa3.98□□□□□ -1.77
TRAV40-201ENST00000390467 KRT78Q8N1N4 520 aa3.98□□□□□ -1.77
TRAV40-201ENST00000390467 FAM71DQ8N9W8 422 aa3.98□□□□□ -1.77
TRAV40-201ENST00000390467 NGDNQ8NEJ9 315 aaKnown RBP3.98□□□□□ -1.77
TRAV40-201ENST00000390467 IPCEF1Q8WWN9 437 aaPredicted RBP3.98□□□□□ -1.77
TRAV40-201ENST00000390467 FAM227BQ96M60 508 aa3.98□□□□□ -1.77
TRAV40-201ENST00000390467 FCRL5Q96RD9 977 aa3.98□□□□□ -1.77
TRAV40-201ENST00000390467 WDR24Q96S15 920 aa3.98□□□□□ -1.77
TRAV40-201ENST00000390467 STRBPQ96SI9 672 aaKnown RBP3.98□□□□□ -1.77
TRAV40-201ENST00000390467 SCNM1Q9BWG6 230 aa3.98□□□□□ -1.77
TRAV40-201ENST00000390467 AGO4Q9HCK5 861 aaKnown RBP3.98□□□□□ -1.77
TRAV40-201ENST00000390467 MAFFQ9ULX9 164 aa3.98□□□□□ -1.77
TRAV40-201ENST00000390467 ZSCAN21Q9Y5A6 473 aaPredicted RBP3.98□□□□□ -1.77
TRAV40-201ENST00000390467 SIRT4Q9Y6E7 314 aaPredicted RBP3.98□□□□□ -1.77
TRAV40-201ENST00000390467 GOLGA6CA6NDK9 693 aa3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms