RNA–Protein interactions for RNA: ENST00000389629.8

RTF1-201, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTF1, Length 5,021 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-201ENST00000389629 UNKQ9C0B0 810 aaKnown RBP14.71□□□□□ -0.05
RTF1-201ENST00000389629 C2orf40Q9H1Z8 148 aa14.71□□□□□ -0.05
RTF1-201ENST00000389629 NRDE2Q9H7Z3 1164 aa14.71□□□□□ -0.05
RTF1-201ENST00000389629 NOCTQ9UK39 431 aaKnown RBP14.71□□□□□ -0.05
RTF1-201ENST00000389629 CSDE1O75534 798 aaKnown RBP14.71□□□□□ -0.05
RTF1-201ENST00000389629 CHRM1P11229 460 aaPredicted RBP14.71□□□□□ -0.05
RTF1-201ENST00000389629 CYP1B1Q16678 543 aa14.71□□□□□ -0.05
RTF1-201ENST00000389629 TMEM161BQ8NDZ6 487 aa14.71□□□□□ -0.05
RTF1-201ENST00000389629 FAM167AQ96KS9 214 aa14.71□□□□□ -0.05
RTF1-201ENST00000389629 FRMD8Q9BZ67 464 aaPredicted RBP14.71□□□□□ -0.05
RTF1-201ENST00000389629 EBF3Q9H4W6 596 aa14.71□□□□□ -0.05
RTF1-201ENST00000389629 SRP72O76094 671 aaKnown RBP14.71□□□□□ -0.06
RTF1-201ENST00000389629 POLBP06746 335 aa14.71□□□□□ -0.06
RTF1-201ENST00000389629 NEK3P51956 506 aa14.71□□□□□ -0.06
RTF1-201ENST00000389629 HADHBP55084 474 aaKnown RBP14.71□□□□□ -0.06
RTF1-201ENST00000389629 TSPY1Q01534 308 aa14.71□□□□□ -0.06
RTF1-201ENST00000389629 DPYSL3Q14195 570 aa14.71□□□□□ -0.06
RTF1-201ENST00000389629 TLDC1Q6P9B6 456 aa14.71□□□□□ -0.06
RTF1-201ENST00000389629 SETD3Q86TU7 594 aaPredicted RBP14.71□□□□□ -0.06
RTF1-201ENST00000389629 ATG4CQ96DT6 458 aa14.71□□□□□ -0.06
RTF1-201ENST00000389629 TMCO1Q9UM00 188 aa14.71□□□□□ -0.06
RTF1-201ENST00000389629 PLA2G4CQ9UP65 541 aa14.71□□□□□ -0.06
RTF1-201ENST00000389629 LRRC42Q9Y546 428 aa14.71□□□□□ -0.06
RTF1-201ENST00000389629 PRPF4O43172 522 aaKnown RBP eCLIP14.7□□□□□ -0.06
RTF1-201ENST00000389629 HMGCS2P54868 508 aa14.7□□□□□ -0.06
RTF1-201ENST00000389629 PTF1AQ7RTS3 328 aa14.7□□□□□ -0.06
RTF1-201ENST00000389629 ADCK1Q86TW2 530 aa14.7□□□□□ -0.06
RTF1-201ENST00000389629 CEP19Q96LK0 163 aa14.7□□□□□ -0.06
RTF1-201ENST00000389629 ACSS3Q9H6R3 686 aa14.7□□□□□ -0.06
RTF1-201ENST00000389629 STK32BQ9NY57 414 aa14.7□□□□□ -0.06
RTF1-201ENST00000389629 IPO11Q9UI26 975 aaKnown RBP14.7□□□□□ -0.06
RTF1-201ENST00000389629 KLHL33A6NCF5 533 aa14.7□□□□□ -0.06
RTF1-201ENST00000389629 KRT75O95678 551 aa14.7□□□□□ -0.06
RTF1-201ENST00000389629 LSM8O95777 96 aaKnown RBP14.7□□□□□ -0.06
RTF1-201ENST00000389629 VCLP18206 1134 aa14.7□□□□□ -0.06
RTF1-201ENST00000389629 NME5P56597 212 aa14.7□□□□□ -0.06
RTF1-201ENST00000389629 NFIL3Q16649 462 aa14.7□□□□□ -0.06
RTF1-201ENST00000389629 PIWIL2Q8TC59 973 aaKnown RBP14.7□□□□□ -0.06
RTF1-201ENST00000389629 FAM198AQ9UFP1 575 aa14.7□□□□□ -0.06
RTF1-201ENST00000389629 DCDC2Q9UHG0 476 aa14.7□□□□□ -0.06
RTF1-201ENST00000389629 DRG1Q9Y295 367 aaKnown RBP14.7□□□□□ -0.06
RTF1-201ENST00000389629 DEAF1O75398 565 aaPredicted RBP14.7□□□□□ -0.06
RTF1-201ENST00000389629 DAB1O75553 588 aa14.7□□□□□ -0.06
RTF1-201ENST00000389629 LYPLA1O75608 230 aaPredicted RBP14.7□□□□□ -0.06
RTF1-201ENST00000389629 ITGB5P18084 799 aa14.7□□□□□ -0.06
RTF1-201ENST00000389629 AVPR1AP37288 418 aa14.7□□□□□ -0.06
RTF1-201ENST00000389629 NOMO3P69849 1222 aa14.7□□□□□ -0.06
RTF1-201ENST00000389629 NEDD8Q15843 81 aa14.7□□□□□ -0.06
RTF1-201ENST00000389629 SEL1L3Q68CR1 1132 aa14.7□□□□□ -0.06
RTF1-201ENST00000389629 LPAR1Q92633 364 aa14.7□□□□□ -0.06
RTF1-201ENST00000389629 DACT3Q96B18 629 aaPredicted RBP14.7□□□□□ -0.06
RTF1-201ENST00000389629 PDCD2LQ9BRP1 358 aa14.7□□□□□ -0.06
RTF1-201ENST00000389629 ZNF518BQ9C0D4 1074 aa14.7□□□□□ -0.06
RTF1-201ENST00000389629 DMAC2Q9NW81 257 aa14.7□□□□□ -0.06
RTF1-201ENST00000389629 PRKAG3Q9UGI9 489 aa14.7□□□□□ -0.06
RTF1-201ENST00000389629 SCN11AQ9UI33 1791 aa14.7□□□□□ -0.06
RTF1-201ENST00000389629 CCDC189A1A4V9 331 aa14.7□□□□□ -0.06
RTF1-201ENST00000389629 M0R3G1 203 aa14.7□□□□□ -0.06
RTF1-201ENST00000389629 CCNB1P14635 433 aa14.7□□□□□ -0.06
RTF1-201ENST00000389629 GRK2P25098 689 aa14.7□□□□□ -0.06
RTF1-201ENST00000389629 C21orf59P57076 290 aa14.7□□□□□ -0.06
RTF1-201ENST00000389629 KCTD2Q14681 263 aa14.7□□□□□ -0.06
RTF1-201ENST00000389629 PTAR1Q7Z6K3 402 aaPredicted RBP14.7□□□□□ -0.06
RTF1-201ENST00000389629 TDRD5Q8NAT2 981 aaKnown RBP14.7□□□□□ -0.06
RTF1-201ENST00000389629 HELQQ8TDG4 1101 aa14.7□□□□□ -0.06
RTF1-201ENST00000389629 WRNIP1Q96S55 665 aa14.7□□□□□ -0.06
RTF1-201ENST00000389629 ETNK2Q9NVF9 386 aa14.7□□□□□ -0.06
RTF1-201ENST00000389629 ADCY6O43306 1168 aa14.69□□□□□ -0.06
RTF1-201ENST00000389629 AVILO75366 819 aa14.69□□□□□ -0.06
RTF1-201ENST00000389629 SERPINE1P05121 402 aa14.69□□□□□ -0.06
RTF1-201ENST00000389629 NEK2P51955 445 aa14.69□□□□□ -0.06
RTF1-201ENST00000389629 SPATA16Q9BXB7 569 aa14.69□□□□□ -0.06
RTF1-201ENST00000389629 PREBQ9HCU5 417 aa14.69□□□□□ -0.06
RTF1-201ENST00000389629 MYRFQ9Y2G1 1151 aa14.69□□□□□ -0.06
RTF1-201ENST00000389629 AP4B1Q9Y6B7 739 aa14.69□□□□□ -0.06
RTF1-201ENST00000389629 C4AP0C0L4 1744 aa14.69□□□□□ -0.06
RTF1-201ENST00000389629 C4BP0C0L5 1744 aa14.69□□□□□ -0.06
RTF1-201ENST00000389629 TM4SF1P30408 202 aa14.69□□□□□ -0.06
RTF1-201ENST00000389629 MPP2Q14168 576 aa14.69□□□□□ -0.06
RTF1-201ENST00000389629 C15orf52Q6ZUT6 534 aaKnown RBP14.69□□□□□ -0.06
RTF1-201ENST00000389629 BHLHE22Q8NFJ8 381 aaPredicted RBP14.69□□□□□ -0.06
RTF1-201ENST00000389629 TSPAN14Q8NG11 270 aa14.69□□□□□ -0.06
RTF1-201ENST00000389629 IL31RAQ8NI17 732 aa14.69□□□□□ -0.06
RTF1-201ENST00000389629 KIF12Q96FN5 646 aa14.69□□□□□ -0.06
RTF1-201ENST00000389629 MYH13Q9UKX3 1938 aa14.69□□□□□ -0.06
RTF1-201ENST00000389629 BOLA3Q53S33 107 aa14.69□□□□□ -0.06
RTF1-201ENST00000389629 CES3Q6UWW8 571 aa14.69□□□□□ -0.06
RTF1-201ENST00000389629 NPNTQ6UXI9 565 aa14.69□□□□□ -0.06
RTF1-201ENST00000389629 C10orf82Q8WW14 230 aa14.69□□□□□ -0.06
RTF1-201ENST00000389629 SNX9Q9Y5X1 595 aa14.69□□□□□ -0.06
RTF1-201ENST00000389629 TUBGCP6Q96RT7 1819 aa14.69□□□□□ -0.06
RTF1-201ENST00000389629 hCG_1818297A0A087WSY0 165 aa14.69□□□□□ -0.06
RTF1-201ENST00000389629 OATP04181 439 aa14.69□□□□□ -0.06
RTF1-201ENST00000389629 PEX2P28328 305 aa14.69□□□□□ -0.06
RTF1-201ENST00000389629 HMOX2P30519 316 aa14.69□□□□□ -0.06
RTF1-201ENST00000389629 PHKA2P46019 1235 aa14.69□□□□□ -0.06
RTF1-201ENST00000389629 EML3Q32P44 896 aa14.69□□□□□ -0.06
RTF1-201ENST00000389629 UBAP2Q5T6F2 1119 aaKnown RBP14.69□□□□□ -0.06
RTF1-201ENST00000389629 HPS6Q86YV9 775 aa14.69□□□□□ -0.06
RTF1-201ENST00000389629 RDM1Q8NG50 284 aa14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms