RNA–Protein interactions for RNA: ENST00000389589.8

SHOX2-201, Transcript of short stature homeobox 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SHOX2, Length 2,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-201ENST00000389589 NLRC5Q86WI3 1866 aa26.21■■□□□ 1.79
SHOX2-201ENST00000389589 HHLA1C9JL84 531 aa26.2■■□□□ 1.78
SHOX2-201ENST00000389589 RGS16O15492 202 aaPredicted RBP26.2■■□□□ 1.78
SHOX2-201ENST00000389589 ACTN2P35609 894 aa26.2■■□□□ 1.78
SHOX2-201ENST00000389589 MAGEA4P43358 317 aa26.2■■□□□ 1.78
SHOX2-201ENST00000389589 CTCFP49711 727 aaPredicted RBP26.2■■□□□ 1.78
SHOX2-201ENST00000389589 CDK7P50613 346 aa26.2■■□□□ 1.78
SHOX2-201ENST00000389589 TSPY1Q01534 308 aa26.2■■□□□ 1.78
SHOX2-201ENST00000389589 DSC1Q08554 894 aa26.2■■□□□ 1.78
SHOX2-201ENST00000389589 ZC3H18Q86VM9 953 aaKnown RBP26.2■■□□□ 1.78
SHOX2-201ENST00000389589 UHMK1Q8TAS1 419 aaKnown RBP26.2■■□□□ 1.78
SHOX2-201ENST00000389589 PRCCQ92733 491 aaPredicted RBP26.2■■□□□ 1.78
SHOX2-201ENST00000389589 TTC25Q96NG3 672 aa26.2■■□□□ 1.78
SHOX2-201ENST00000389589 PKMYT1Q99640 499 aa26.2■■□□□ 1.78
SHOX2-201ENST00000389589 LRRC4CQ9HCJ2 640 aa26.2■■□□□ 1.78
SHOX2-201ENST00000389589 MTMR10Q9NXD2 777 aa26.2■■□□□ 1.78
SHOX2-201ENST00000389589 RRN3Q9NYV6 651 aa26.2■■□□□ 1.78
SHOX2-201ENST00000389589 PATJQ8NI35 1801 aa26.2■■□□□ 1.78
SHOX2-201ENST00000389589 TLDC2A0PJX2 215 aa26.19■■□□□ 1.78
SHOX2-201ENST00000389589 YY1P25490 414 aa26.19■■□□□ 1.78
SHOX2-201ENST00000389589 ATP1A2P50993 1020 aa26.19■■□□□ 1.78
SHOX2-201ENST00000389589 CLLU1OSQ5K130 101 aa26.19■■□□□ 1.78
SHOX2-201ENST00000389589 KCTD15Q96SI1 283 aaPredicted RBP26.19■■□□□ 1.78
SHOX2-201ENST00000389589 CALCOCO1Q9P1Z2 691 aa26.19■■□□□ 1.78
SHOX2-201ENST00000389589 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP26.19■■□□□ 1.78
SHOX2-201ENST00000389589 TMEM189-UBE2V1I3L0A0 370 aa26.19■■□□□ 1.78
SHOX2-201ENST00000389589 DNM1LO00429 736 aa26.19■■□□□ 1.78
SHOX2-201ENST00000389589 NRP1O14786 923 aa26.19■■□□□ 1.78
SHOX2-201ENST00000389589 CAPN9O14815 690 aa26.19■■□□□ 1.78
SHOX2-201ENST00000389589 ZBED1O96006 694 aa26.19■■□□□ 1.78
SHOX2-201ENST00000389589 HPDP32754 393 aaPredicted RBP26.19■■□□□ 1.78
SHOX2-201ENST00000389589 NR2C2P49116 596 aa26.19■■□□□ 1.78
SHOX2-201ENST00000389589 CACNA2D1P54289 1103 aa26.19■■□□□ 1.78
SHOX2-201ENST00000389589 MAGOHP61326 146 aaKnown RBP26.19■■□□□ 1.78
SHOX2-201ENST00000389589 OTUD1Q5VV17 481 aaPredicted RBP26.19■■□□□ 1.78
SHOX2-201ENST00000389589 MFSD5Q6N075 450 aa26.19■■□□□ 1.78
SHOX2-201ENST00000389589 IRGQQ8WZA9 623 aa26.19■■□□□ 1.78
SHOX2-201ENST00000389589 SLC9A7Q96T83 725 aa26.19■■□□□ 1.78
SHOX2-201ENST00000389589 TMEM30AQ9NV96 361 aa26.19■■□□□ 1.78
SHOX2-201ENST00000389589 HEY1Q9Y5J3 304 aa26.19■■□□□ 1.78
SHOX2-201ENST00000389589 BCLAF3A2AJT9 711 aaKnown RBP26.18■■□□□ 1.78
SHOX2-201ENST00000389589 M0QYT0 321 aa26.18■■□□□ 1.78
SHOX2-201ENST00000389589 AGTP01019 485 aa26.18■■□□□ 1.78
SHOX2-201ENST00000389589 ARL4AP40617 200 aa26.18■■□□□ 1.78
SHOX2-201ENST00000389589 AIF1P55008 147 aa26.18■■□□□ 1.78
SHOX2-201ENST00000389589 PPP2R2AP63151 447 aa26.18■■□□□ 1.78
SHOX2-201ENST00000389589 CENPUQ71F23 418 aa26.18■■□□□ 1.78
SHOX2-201ENST00000389589 FAM131BQ86XD5 332 aa26.18■■□□□ 1.78
SHOX2-201ENST00000389589 SCML4Q8N228 414 aa26.18■■□□□ 1.78
SHOX2-201ENST00000389589 RTP4Q96DX8 246 aa26.18■■□□□ 1.78
SHOX2-201ENST00000389589 CSPG4P5Q96PW8 444 aa26.18■■□□□ 1.78
SHOX2-201ENST00000389589 PNPLA8Q9NP80 782 aa26.18■■□□□ 1.78
SHOX2-201ENST00000389589 SAYSD1Q9NPB0 183 aa26.18■■□□□ 1.78
SHOX2-201ENST00000389589 DMAP1Q9NPF5 467 aaPredicted RBP26.18■■□□□ 1.78
SHOX2-201ENST00000389589 TMEM161AQ9NX61 479 aa26.18■■□□□ 1.78
SHOX2-201ENST00000389589 TCEA3O75764 348 aa26.18■■□□□ 1.78
SHOX2-201ENST00000389589 ITGB1P05556 798 aa26.18■■□□□ 1.78
SHOX2-201ENST00000389589 ABHD2P08910 425 aa26.18■■□□□ 1.78
SHOX2-201ENST00000389589 IRAK1P51617 712 aa26.18■■□□□ 1.78
SHOX2-201ENST00000389589 GNGT1P63211 74 aa26.18■■□□□ 1.78
SHOX2-201ENST00000389589 DEUP1Q05D60 604 aa26.18■■□□□ 1.78
SHOX2-201ENST00000389589 XRCC4Q13426 336 aa26.18■■□□□ 1.78
SHOX2-201ENST00000389589 SYPL2Q5VXT5 272 aa26.18■■□□□ 1.78
SHOX2-201ENST00000389589 HFE2Q6ZVN8 426 aa26.18■■□□□ 1.78
SHOX2-201ENST00000389589 GPRIN1Q7Z2K8 1008 aa26.18■■□□□ 1.78
SHOX2-201ENST00000389589 EPS8L3Q8TE67 593 aaKnown RBP26.18■■□□□ 1.78
SHOX2-201ENST00000389589 CPT1BQ92523 772 aa26.18■■□□□ 1.78
SHOX2-201ENST00000389589 SERPINB12Q96P63 405 aa26.18■■□□□ 1.78
SHOX2-201ENST00000389589 ELAC1Q9H777 363 aaKnown RBP26.18■■□□□ 1.78
SHOX2-201ENST00000389589 TRIM17Q9Y577 477 aa26.18■■□□□ 1.78
SHOX2-201ENST00000389589 YJEFN3A6XGL0 299 aa26.17■■□□□ 1.78
SHOX2-201ENST00000389589 E7ENQ6 273 aa26.17■■□□□ 1.78
SHOX2-201ENST00000389589 DDHD2O94830 711 aa26.17■■□□□ 1.78
SHOX2-201ENST00000389589 LTFP02788 710 aa26.17■■□□□ 1.78
SHOX2-201ENST00000389589 CDR1P51861 262 aa26.17■■□□□ 1.78
SHOX2-201ENST00000389589 ZNF280BQ86YH2 543 aa26.17■■□□□ 1.78
SHOX2-201ENST00000389589 CDKL3Q8IVW4 592 aaPredicted RBP26.17■■□□□ 1.78
SHOX2-201ENST00000389589 COLGALT2Q8IYK4 626 aa26.17■■□□□ 1.78
SHOX2-201ENST00000389589 NAT8LQ8N9F0 302 aa26.17■■□□□ 1.78
SHOX2-201ENST00000389589 OR10T2Q8NGX3 314 aa26.17■■□□□ 1.78
SHOX2-201ENST00000389589 CCDC77Q9BR77 488 aa26.17■■□□□ 1.78
SHOX2-201ENST00000389589 NAALADL1Q9UQQ1 740 aa26.17■■□□□ 1.78
SHOX2-201ENST00000389589 FYNP06241 537 aa26.16■■□□□ 1.78
SHOX2-201ENST00000389589 IVLP07476 585 aa26.16■■□□□ 1.78
SHOX2-201ENST00000389589 USP17L7P0C7H9 530 aa26.16■■□□□ 1.78
SHOX2-201ENST00000389589 BDNFP23560 247 aa26.16■■□□□ 1.78
SHOX2-201ENST00000389589 YWHAHQ04917 246 aaPredicted RBP26.16■■□□□ 1.78
SHOX2-201ENST00000389589 SKIDA1Q1XH10 827 aa26.16■■□□□ 1.78
SHOX2-201ENST00000389589 FAM126BQ8IXS8 530 aa26.16■■□□□ 1.78
SHOX2-201ENST00000389589 FAM193BQ96PV7 902 aaPredicted RBP26.16■■□□□ 1.78
SHOX2-201ENST00000389589 USP29Q9HBJ7 922 aa26.16■■□□□ 1.78
SHOX2-201ENST00000389589 CWC15Q9P013 229 aaKnown RBP26.16■■□□□ 1.78
SHOX2-201ENST00000389589 RNASELQ05823 741 aaKnown RBP26.16■■□□□ 1.78
SHOX2-201ENST00000389589 PM20D1Q6GTS8 502 aa26.16■■□□□ 1.78
SHOX2-201ENST00000389589 C4orf50Q6ZRC1 276 aa26.16■■□□□ 1.78
SHOX2-201ENST00000389589 PGAP3Q96FM1 320 aaPredicted RBP26.16■■□□□ 1.78
SHOX2-201ENST00000389589 C9orf72Q96LT7 481 aa26.16■■□□□ 1.78
SHOX2-201ENST00000389589 TBC1D13Q9NVG8 400 aa26.16■■□□□ 1.78
SHOX2-201ENST00000389589 PAK5Q9P286 719 aa26.16■■□□□ 1.78
SHOX2-201ENST00000389589 SMIM23A6NLE4 172 aa26.15■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms