RNA–Protein interactions for RNA: ENST00000377942.7

PCDH8-202, Transcript of protocadherin 8, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PCDH8, Length 5,088 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH8-202ENST00000377942 EPS8L1Q8TE68 723 aa20.29■□□□□ 0.84
PCDH8-202ENST00000377942 C18orf25Q96B23 403 aaPredicted RBP20.29■□□□□ 0.84
PCDH8-202ENST00000377942 FAR2Q96K12 515 aa20.29■□□□□ 0.84
PCDH8-202ENST00000377942 FICDQ9BVA6 458 aa20.29■□□□□ 0.84
PCDH8-202ENST00000377942 NT5MQ9NPB1 228 aa20.29■□□□□ 0.84
PCDH8-202ENST00000377942 NIPSNAP3AQ9UFN0 247 aaPredicted RBP20.29■□□□□ 0.84
PCDH8-202ENST00000377942 LMO7Q8WWI1 1683 aa20.29■□□□□ 0.84
PCDH8-202ENST00000377942 FARP2O94887 1054 aaPredicted RBP20.29■□□□□ 0.84
PCDH8-202ENST00000377942 SCNN1GP51170 649 aa20.29■□□□□ 0.84
PCDH8-202ENST00000377942 ITGB3BPQ13352 177 aaPredicted RBP20.29■□□□□ 0.84
PCDH8-202ENST00000377942 INPP5AQ14642 412 aa20.29■□□□□ 0.84
PCDH8-202ENST00000377942 NLRP9Q7RTR0 991 aa20.29■□□□□ 0.84
PCDH8-202ENST00000377942 OTUB1Q96FW1 271 aaPredicted RBP20.29■□□□□ 0.84
PCDH8-202ENST00000377942 CAMKK2Q96RR4 588 aa20.29■□□□□ 0.84
PCDH8-202ENST00000377942 VAT1Q99536 393 aa20.29■□□□□ 0.84
PCDH8-202ENST00000377942 VAV3Q9UKW4 847 aa20.29■□□□□ 0.84
PCDH8-202ENST00000377942 INPP1P49441 399 aa20.29■□□□□ 0.84
PCDH8-202ENST00000377942 ARL4DP49703 201 aa20.29■□□□□ 0.84
PCDH8-202ENST00000377942 APOL5Q9BWW9 433 aa20.29■□□□□ 0.84
PCDH8-202ENST00000377942 ING2Q9H160 280 aa20.29■□□□□ 0.84
PCDH8-202ENST00000377942 SYTL2Q9HCH5 934 aa20.29■□□□□ 0.84
PCDH8-202ENST00000377942 ABCC13Q9NSE7 274 aa20.29■□□□□ 0.84
PCDH8-202ENST00000377942 PLIN4Q96Q06 1357 aa20.29■□□□□ 0.84
PCDH8-202ENST00000377942 ASTN2O75129 1339 aaPredicted RBP20.29■□□□□ 0.84
PCDH8-202ENST00000377942 ZNF541Q9H0D2 1346 aa20.29■□□□□ 0.84
PCDH8-202ENST00000377942 C6orf10Q5SRN2 563 aa20.29■□□□□ 0.84
PCDH8-202ENST00000377942 WDR59Q6PJI9 974 aa20.29■□□□□ 0.84
PCDH8-202ENST00000377942 SCUBE3Q8IX30 993 aa20.29■□□□□ 0.84
PCDH8-202ENST00000377942 SERBP1Q8NC51 408 aaKnown RBP eCLIP20.29■□□□□ 0.84
PCDH8-202ENST00000377942 PNKPQ96T60 521 aa20.29■□□□□ 0.84
PCDH8-202ENST00000377942 COG4Q9H9E3 785 aa20.29■□□□□ 0.84
PCDH8-202ENST00000377942 CDH9Q9ULB4 789 aa20.29■□□□□ 0.84
PCDH8-202ENST00000377942 PLA2G4CQ9UP65 541 aa20.29■□□□□ 0.84
PCDH8-202ENST00000377942 CBX4O00257 560 aa20.28■□□□□ 0.84
PCDH8-202ENST00000377942 USP2O75604 605 aaPredicted RBP20.28■□□□□ 0.84
PCDH8-202ENST00000377942 ENO1P06733 434 aaKnown RBP20.28■□□□□ 0.84
PCDH8-202ENST00000377942 CKBP12277 381 aa20.28■□□□□ 0.84
PCDH8-202ENST00000377942 NOS2P35228 1153 aa20.28■□□□□ 0.84
PCDH8-202ENST00000377942 KDSRQ06136 332 aa20.28■□□□□ 0.84
PCDH8-202ENST00000377942 SLC39A12Q504Y0 691 aa20.28■□□□□ 0.84
PCDH8-202ENST00000377942 ABHD15Q6UXT9 468 aa20.28■□□□□ 0.84
PCDH8-202ENST00000377942 ARMC2Q8NEN0 867 aa20.28■□□□□ 0.84
PCDH8-202ENST00000377942 MARCOQ9UEW3 520 aaPredicted RBP20.28■□□□□ 0.84
PCDH8-202ENST00000377942 FAF1Q9UNN5 650 aaPredicted RBP20.28■□□□□ 0.84
PCDH8-202ENST00000377942 CHI3L2Q15782 390 aa20.28■□□□□ 0.84
PCDH8-202ENST00000377942 C16orf89Q6UX73 402 aa20.28■□□□□ 0.84
PCDH8-202ENST00000377942 NT5DC3Q86UY8 548 aa20.28■□□□□ 0.84
PCDH8-202ENST00000377942 CATSPER1Q8NEC5 780 aa20.28■□□□□ 0.84
PCDH8-202ENST00000377942 RUBCNLQ9H714 662 aa20.28■□□□□ 0.84
PCDH8-202ENST00000377942 THG1LQ9NWX6 298 aaKnown RBP20.28■□□□□ 0.84
PCDH8-202ENST00000377942 AKAP12Q02952 1782 aa20.28■□□□□ 0.84
PCDH8-202ENST00000377942 PHF20L1A8MW92 1017 aa20.28■□□□□ 0.84
PCDH8-202ENST00000377942 GCKP35557 465 aa20.28■□□□□ 0.84
PCDH8-202ENST00000377942 PRKD2Q9BZL6 878 aa20.28■□□□□ 0.84
PCDH8-202ENST00000377942 SENP6Q9GZR1 1112 aaPredicted RBP20.28■□□□□ 0.84
PCDH8-202ENST00000377942 CLPBQ9H078 707 aa20.28■□□□□ 0.84
PCDH8-202ENST00000377942 CDC42EP4Q9H3Q1 356 aaKnown RBP20.28■□□□□ 0.84
PCDH8-202ENST00000377942 PRKAR2AP13861 404 aaKnown RBP20.28■□□□□ 0.84
PCDH8-202ENST00000377942 MLH1P40692 756 aa20.28■□□□□ 0.84
PCDH8-202ENST00000377942 GRM5P41594 1212 aa20.28■□□□□ 0.84
PCDH8-202ENST00000377942 TUBP50607 506 aa20.28■□□□□ 0.84
PCDH8-202ENST00000377942 MGAT5Q09328 741 aa20.28■□□□□ 0.84
PCDH8-202ENST00000377942 CDH17Q12864 832 aa20.28■□□□□ 0.84
PCDH8-202ENST00000377942 RRM2BQ7LG56 351 aa20.28■□□□□ 0.84
PCDH8-202ENST00000377942 ILKAPQ9H0C8 392 aaPredicted RBP20.28■□□□□ 0.84
PCDH8-202ENST00000377942 GIT1Q9Y2X7 761 aa20.28■□□□□ 0.84
PCDH8-202ENST00000377942 PHLPP1O60346 1717 aa20.28■□□□□ 0.84
PCDH8-202ENST00000377942 E5RJQ4 531 aa20.27■□□□□ 0.84
PCDH8-202ENST00000377942 SERPIND1P05546 499 aa20.27■□□□□ 0.84
PCDH8-202ENST00000377942 VPS37AQ8NEZ2 397 aa20.27■□□□□ 0.84
PCDH8-202ENST00000377942 WWOXQ9NZC7 414 aa20.27■□□□□ 0.84
PCDH8-202ENST00000377942 CREMQ03060 361 aa20.27■□□□□ 0.84
PCDH8-202ENST00000377942 ZACNQ401N2 412 aa20.27■□□□□ 0.84
PCDH8-202ENST00000377942 FAM71AQ8IYT1 594 aa20.27■□□□□ 0.84
PCDH8-202ENST00000377942 KATNAL2Q8IYT4 538 aa20.27■□□□□ 0.84
PCDH8-202ENST00000377942 HTR3CQ8WXA8 447 aa20.27■□□□□ 0.84
PCDH8-202ENST00000377942 SMIM35A0A1B0GVV1 85 aa20.27■□□□□ 0.84
PCDH8-202ENST00000377942 SIGLEC16A6NMB1 481 aa20.27■□□□□ 0.84
PCDH8-202ENST00000377942 MIPP30301 263 aa20.27■□□□□ 0.84
PCDH8-202ENST00000377942 DLG4P78352 724 aa20.27■□□□□ 0.84
PCDH8-202ENST00000377942 RARS2Q5T160 578 aaKnown RBP20.27■□□□□ 0.84
PCDH8-202ENST00000377942 DENND1BQ6P3S1 775 aa20.27■□□□□ 0.84
PCDH8-202ENST00000377942 LRRC52Q8N7C0 313 aa20.27■□□□□ 0.84
PCDH8-202ENST00000377942 C4orf32Q8N8J7 132 aa20.27■□□□□ 0.84
PCDH8-202ENST00000377942 ZNF558Q96NG5 402 aa20.27■□□□□ 0.84
PCDH8-202ENST00000377942 PRPF18Q99633 342 aaKnown RBP20.27■□□□□ 0.84
PCDH8-202ENST00000377942 MRPL46Q9H2W6 279 aaKnown RBP20.27■□□□□ 0.84
PCDH8-202ENST00000377942 TMEM88BA6NKF7 163 aa20.27■□□□□ 0.83
PCDH8-202ENST00000377942 BDNFP23560 247 aa20.27■□□□□ 0.83
PCDH8-202ENST00000377942 ARMC6Q6NXE6 501 aa20.27■□□□□ 0.83
PCDH8-202ENST00000377942 TEKT4Q8WW24 435 aa20.27■□□□□ 0.83
PCDH8-202ENST00000377942 ULBP1Q9BZM6 244 aa20.27■□□□□ 0.83
PCDH8-202ENST00000377942 GID8Q9NWU2 228 aa20.27■□□□□ 0.83
PCDH8-202ENST00000377942 NFICP08651 508 aa20.26■□□□□ 0.83
PCDH8-202ENST00000377942 RBP1P09455 135 aa20.26■□□□□ 0.83
PCDH8-202ENST00000377942 SPDYE7PQ495Y7 208 aa20.26■□□□□ 0.83
PCDH8-202ENST00000377942 ILDR2Q71H61 639 aa20.26■□□□□ 0.83
PCDH8-202ENST00000377942 GLIS3Q8NEA6 775 aa20.26■□□□□ 0.83
PCDH8-202ENST00000377942 TLR10Q9BXR5 811 aa20.26■□□□□ 0.83
PCDH8-202ENST00000377942 PDGFDQ9GZP0 370 aaPredicted RBP20.26■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms