RNA–Protein interactions for RNA: ENST00000377819.9

RTN3-206, Transcript of reticulon 3, humanhuman

TSL 1 (best) BASIC

Gene RTN3, Length 4,937 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-206ENST00000377819 RBP1P09455 135 aa10.93□□□□□ -0.66
RTN3-206ENST00000377819 EXOSC10Q01780 885 aaKnown RBP10.93□□□□□ -0.66
RTN3-206ENST00000377819 NR6A1Q15406 480 aa10.93□□□□□ -0.66
RTN3-206ENST00000377819 C12orf60Q5U649 245 aa10.93□□□□□ -0.66
RTN3-206ENST00000377819 MZT2AQ6P582 158 aa10.93□□□□□ -0.66
RTN3-206ENST00000377819 TRMT11Q7Z4G4 463 aaKnown RBP10.93□□□□□ -0.66
RTN3-206ENST00000377819 ITCHQ96J02 903 aa10.93□□□□□ -0.66
RTN3-206ENST00000377819 C1QTNF1Q9BXJ1 281 aa10.93□□□□□ -0.66
RTN3-206ENST00000377819 COMMD8Q9NX08 183 aa10.93□□□□□ -0.66
RTN3-206ENST00000377819 FBXL21Q9UKT6 434 aa10.93□□□□□ -0.66
RTN3-206ENST00000377819 RUVBL2Q9Y230 463 aaKnown RBP10.93□□□□□ -0.66
RTN3-206ENST00000377819 PCDHB6Q9Y5E3 794 aa10.93□□□□□ -0.66
RTN3-206ENST00000377819 CARMIL3Q8ND23 1372 aa10.93□□□□□ -0.66
RTN3-206ENST00000377819 HOXA2O43364 376 aa10.93□□□□□ -0.66
RTN3-206ENST00000377819 RHOBTB3O94955 611 aa10.93□□□□□ -0.66
RTN3-206ENST00000377819 FAM200BP0CF97 657 aa10.93□□□□□ -0.66
RTN3-206ENST00000377819 ALOX12P18054 663 aa10.93□□□□□ -0.66
RTN3-206ENST00000377819 TGM2P21980 687 aa10.93□□□□□ -0.66
RTN3-206ENST00000377819 PBLDP30039 288 aaPredicted RBP10.93□□□□□ -0.66
RTN3-206ENST00000377819 TCF7P36402 384 aaPredicted RBP10.93□□□□□ -0.66
RTN3-206ENST00000377819 RPL10AP62906 217 aaKnown RBP10.93□□□□□ -0.66
RTN3-206ENST00000377819 GFPT1Q06210 699 aaPredicted RBP10.93□□□□□ -0.66
RTN3-206ENST00000377819 FAM98BQ52LJ0 330 aaKnown RBP10.93□□□□□ -0.66
RTN3-206ENST00000377819 CYP4X1Q8N118 509 aa10.93□□□□□ -0.66
RTN3-206ENST00000377819 GUF1Q8N442 669 aaKnown RBP10.93□□□□□ -0.66
RTN3-206ENST00000377819 PROX1Q92786 737 aa10.93□□□□□ -0.66
RTN3-206ENST00000377819 ADAM33Q9BZ11 813 aa10.93□□□□□ -0.66
RTN3-206ENST00000377819 ENTPD4Q9Y227 616 aa10.93□□□□□ -0.66
RTN3-206ENST00000377819 ZNF142P52746 1687 aaPredicted RBP10.93□□□□□ -0.66
RTN3-206ENST00000377819 DCDC2CA8MYV0 355 aa10.93□□□□□ -0.66
RTN3-206ENST00000377819 CLUP10909 449 aa10.93□□□□□ -0.66
RTN3-206ENST00000377819 PHKG2P15735 406 aa10.93□□□□□ -0.66
RTN3-206ENST00000377819 KCNA6P17658 529 aa10.93□□□□□ -0.66
RTN3-206ENST00000377819 FGFR4P22455 802 aa10.93□□□□□ -0.66
RTN3-206ENST00000377819 THOP1P52888 689 aa10.93□□□□□ -0.66
RTN3-206ENST00000377819 DSG1Q02413 1049 aa10.93□□□□□ -0.66
RTN3-206ENST00000377819 RETSATQ6NUM9 610 aa10.93□□□□□ -0.66
RTN3-206ENST00000377819 FAM171BQ6P995 826 aa10.93□□□□□ -0.66
RTN3-206ENST00000377819 NSMCE2Q96MF7 247 aa10.93□□□□□ -0.66
RTN3-206ENST00000377819 QRFPRQ96P65 431 aa10.93□□□□□ -0.66
RTN3-206ENST00000377819 CGRRF1Q99675 332 aa10.93□□□□□ -0.66
RTN3-206ENST00000377819 TIPINQ9BVW5 301 aa10.93□□□□□ -0.66
RTN3-206ENST00000377819 NOL6Q9H6R4 1146 aaKnown RBP10.93□□□□□ -0.66
RTN3-206ENST00000377819 RNF181Q9P0P0 153 aa10.93□□□□□ -0.66
RTN3-206ENST00000377819 TBC1D30Q9Y2I9 924 aa10.93□□□□□ -0.66
RTN3-206ENST00000377819 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.92□□□□□ -0.66
RTN3-206ENST00000377819 IQCMA0A1B0GVH7 501 aa10.92□□□□□ -0.66
RTN3-206ENST00000377819 OPLAHO14841 1288 aa10.92□□□□□ -0.66
RTN3-206ENST00000377819 FAM20BO75063 409 aa10.92□□□□□ -0.66
RTN3-206ENST00000377819 MSH3P20585 1137 aa10.92□□□□□ -0.66
RTN3-206ENST00000377819 TLX1P31314 330 aaPredicted RBP10.92□□□□□ -0.66
RTN3-206ENST00000377819 PTPN21Q16825 1174 aa10.92□□□□□ -0.66
RTN3-206ENST00000377819 BMT2Q1RMZ1 405 aa10.92□□□□□ -0.66
RTN3-206ENST00000377819 SLC45A4Q5BKX6 768 aa10.92□□□□□ -0.66
RTN3-206ENST00000377819 TTC39BQ5VTQ0 682 aaPredicted RBP10.92□□□□□ -0.66
RTN3-206ENST00000377819 CCSAPQ6IQ19 270 aaPredicted RBP10.92□□□□□ -0.66
RTN3-206ENST00000377819 RNF44Q7L0R7 432 aa10.92□□□□□ -0.66
RTN3-206ENST00000377819 LRRC6Q86X45 466 aa10.92□□□□□ -0.66
RTN3-206ENST00000377819 TDRPQ86YL5 185 aa10.92□□□□□ -0.66
RTN3-206ENST00000377819 HPS6Q86YV9 775 aa10.92□□□□□ -0.66
RTN3-206ENST00000377819 NSUN7Q8NE18 718 aaKnown RBP10.92□□□□□ -0.66
RTN3-206ENST00000377819 MCCC1Q96RQ3 725 aaPredicted RBP10.92□□□□□ -0.66
RTN3-206ENST00000377819 AGPAT1Q99943 283 aa10.92□□□□□ -0.66
RTN3-206ENST00000377819 BDH2Q9BUT1 245 aa10.92□□□□□ -0.66
RTN3-206ENST00000377819 DPY30Q9C005 99 aa10.92□□□□□ -0.66
RTN3-206ENST00000377819 DSN1Q9H410 356 aa10.92□□□□□ -0.66
RTN3-206ENST00000377819 RASSF1Q9NS23 344 aa10.92□□□□□ -0.66
RTN3-206ENST00000377819 ASAP1Q9ULH1 1129 aa10.92□□□□□ -0.66
RTN3-206ENST00000377819 AAR2Q9Y312 384 aaKnown RBP10.92□□□□□ -0.66
RTN3-206ENST00000377819 PCDHB7Q9Y5E2 793 aa10.92□□□□□ -0.66
RTN3-206ENST00000377819 H7C4K7 107 aa10.92□□□□□ -0.66
RTN3-206ENST00000377819 MAGEB3O15480 346 aa10.92□□□□□ -0.66
RTN3-206ENST00000377819 CRTAMO95727 393 aa10.92□□□□□ -0.66
RTN3-206ENST00000377819 F9P00740 461 aa10.92□□□□□ -0.66
RTN3-206ENST00000377819 SERPINA1P01009 418 aa10.92□□□□□ -0.66
RTN3-206ENST00000377819 MBL2P11226 248 aaPredicted RBP10.92□□□□□ -0.66
RTN3-206ENST00000377819 CTSEP14091 401 aa10.92□□□□□ -0.66
RTN3-206ENST00000377819 AKR1B1P15121 316 aa10.92□□□□□ -0.66
RTN3-206ENST00000377819 OMPP47874 163 aa10.92□□□□□ -0.66
RTN3-206ENST00000377819 GPR15P49685 360 aa10.92□□□□□ -0.66
RTN3-206ENST00000377819 EPHA7Q15375 998 aa10.92□□□□□ -0.66
RTN3-206ENST00000377819 CCDC153Q494R4 210 aa10.92□□□□□ -0.66
RTN3-206ENST00000377819 TMED8Q6PL24 325 aaPredicted RBP10.92□□□□□ -0.66
RTN3-206ENST00000377819 MAP4K1Q92918 833 aa10.92□□□□□ -0.66
RTN3-206ENST00000377819 DYNLL2Q96FJ2 89 aa10.92□□□□□ -0.66
RTN3-206ENST00000377819 OSBPL8Q9BZF1 889 aa10.92□□□□□ -0.66
RTN3-206ENST00000377819 ZFYVE28Q9HCC9 887 aa10.92□□□□□ -0.66
RTN3-206ENST00000377819 ADPRHL2Q9NX46 363 aa10.92□□□□□ -0.66
RTN3-206ENST00000377819 ADGRL1O94910 1474 aa10.92□□□□□ -0.66
RTN3-206ENST00000377819 POLR3AO14802 1390 aaPredicted RBP10.92□□□□□ -0.66
RTN3-206ENST00000377819 POTEMA6NI47 508 aa10.92□□□□□ -0.66
RTN3-206ENST00000377819 POTECB2RU33 542 aa10.92□□□□□ -0.66
RTN3-206ENST00000377819 GARTP22102 1010 aa10.92□□□□□ -0.66
RTN3-206ENST00000377819 ATP5F1P24539 256 aaPredicted RBP10.92□□□□□ -0.66
RTN3-206ENST00000377819 PNPLA4P41247 253 aa10.92□□□□□ -0.66
RTN3-206ENST00000377819 SERPINB8P50452 374 aa10.92□□□□□ -0.66
RTN3-206ENST00000377819 GRSF1Q12849 480 aaKnown RBP eCLIP10.92□□□□□ -0.66
RTN3-206ENST00000377819 ABRQ12979 859 aa10.92□□□□□ -0.66
RTN3-206ENST00000377819 MAD2L1Q13257 205 aaPredicted RBP10.92□□□□□ -0.66
RTN3-206ENST00000377819 BARGINQ6ZT62 677 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms