RNA–Protein interactions for RNA: ENST00000377808.8

SMARCE1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 1,307 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-203ENST00000377808 CORO1AP31146 461 aaKnown RBP12.12□□□□□ -0.47
SMARCE1-203ENST00000377808 TIE1P35590 1138 aa12.12□□□□□ -0.47
SMARCE1-203ENST00000377808 ZNF132P52740 706 aa12.12□□□□□ -0.47
SMARCE1-203ENST00000377808 COG7P83436 770 aa12.12□□□□□ -0.47
SMARCE1-203ENST00000377808 SRSF5Q13243 272 aaKnown RBP12.12□□□□□ -0.47
SMARCE1-203ENST00000377808 SIM2Q14190 667 aaPredicted RBP12.12□□□□□ -0.47
SMARCE1-203ENST00000377808 KCNJ12Q14500 433 aa12.12□□□□□ -0.47
SMARCE1-203ENST00000377808 GAB4Q2WGN9 574 aa12.12□□□□□ -0.47
SMARCE1-203ENST00000377808 VWA3BQ502W6 1294 aa12.12□□□□□ -0.47
SMARCE1-203ENST00000377808 PMF1Q6P1K2 205 aa12.12□□□□□ -0.47
SMARCE1-203ENST00000377808 SASS6Q6UVJ0 657 aa12.12□□□□□ -0.47
SMARCE1-203ENST00000377808 HTR3DQ70Z44 454 aa12.12□□□□□ -0.47
SMARCE1-203ENST00000377808 CEP68Q76N32 757 aa12.12□□□□□ -0.47
SMARCE1-203ENST00000377808 ENOSF1Q7L5Y1 443 aa12.12□□□□□ -0.47
SMARCE1-203ENST00000377808 LONP2Q86WA8 852 aa12.12□□□□□ -0.47
SMARCE1-203ENST00000377808 TMEM25Q86YD3 366 aa12.12□□□□□ -0.47
SMARCE1-203ENST00000377808 CCDC33Q8N5R6 958 aa12.12□□□□□ -0.47
SMARCE1-203ENST00000377808 KCTD13Q8WZ19 329 aa12.12□□□□□ -0.47
SMARCE1-203ENST00000377808 EZH1Q92800 747 aaPredicted RBP12.12□□□□□ -0.47
SMARCE1-203ENST00000377808 FAM81BQ96LP2 452 aa12.12□□□□□ -0.47
SMARCE1-203ENST00000377808 XPO6Q96QU8 1125 aaKnown RBP12.12□□□□□ -0.47
SMARCE1-203ENST00000377808 ZSWIM1Q9BR11 485 aa12.12□□□□□ -0.47
SMARCE1-203ENST00000377808 TUBGCP2Q9BSJ2 902 aa12.12□□□□□ -0.47
SMARCE1-203ENST00000377808 MIS12Q9H081 205 aa12.12□□□□□ -0.47
SMARCE1-203ENST00000377808 ZDHHC4Q9NPG8 344 aa12.12□□□□□ -0.47
SMARCE1-203ENST00000377808 CNGB3Q9NQW8 809 aa12.12□□□□□ -0.47
SMARCE1-203ENST00000377808 DNAJC17Q9NVM6 304 aaKnown RBP12.12□□□□□ -0.47
SMARCE1-203ENST00000377808 DEC1Q9P2X7 70 aa12.12□□□□□ -0.47
SMARCE1-203ENST00000377808 APEX2Q9UBZ4 518 aa12.12□□□□□ -0.47
SMARCE1-203ENST00000377808 VPS13AQ96RL7 3174 aa12.12□□□□□ -0.47
SMARCE1-203ENST00000377808 GTPBP10A4D1E9 387 aaKnown RBP12.11□□□□□ -0.47
SMARCE1-203ENST00000377808 YJEFN3A6XGL0 299 aa12.11□□□□□ -0.47
SMARCE1-203ENST00000377808 E7ENQ6 273 aa12.11□□□□□ -0.47
SMARCE1-203ENST00000377808 K7EQS6 105 aa12.11□□□□□ -0.47
SMARCE1-203ENST00000377808 HOXC11O43248 304 aaPredicted RBP12.11□□□□□ -0.47
SMARCE1-203ENST00000377808 LILRB5O75023 590 aa12.11□□□□□ -0.47
SMARCE1-203ENST00000377808 PAPSS2O95340 614 aaPredicted RBP12.11□□□□□ -0.47
SMARCE1-203ENST00000377808 PON1P27169 355 aa12.11□□□□□ -0.47
SMARCE1-203ENST00000377808 EIF2DP41214 584 aaKnown RBP12.11□□□□□ -0.47
SMARCE1-203ENST00000377808 GRIA2P42262 883 aa12.11□□□□□ -0.47
SMARCE1-203ENST00000377808 DAOAP59103 153 aa12.11□□□□□ -0.47
SMARCE1-203ENST00000377808 DMC1Q14565 340 aa12.11□□□□□ -0.47
SMARCE1-203ENST00000377808 PREPLQ4J6C6 727 aaPredicted RBP12.11□□□□□ -0.47
SMARCE1-203ENST00000377808 PKDCCQ504Y2 493 aa12.11□□□□□ -0.47
SMARCE1-203ENST00000377808 BSPRYQ5W0U4 402 aa12.11□□□□□ -0.47
SMARCE1-203ENST00000377808 PM20D1Q6GTS8 502 aa12.11□□□□□ -0.47
SMARCE1-203ENST00000377808 GRAMD4Q6IC98 578 aa12.11□□□□□ -0.47
SMARCE1-203ENST00000377808 DENND1BQ6P3S1 775 aa12.11□□□□□ -0.47
SMARCE1-203ENST00000377808 DENND1CQ8IV53 801 aa12.11□□□□□ -0.47
SMARCE1-203ENST00000377808 FMNL3Q8IVF7 1028 aa12.11□□□□□ -0.47
SMARCE1-203ENST00000377808 SFTPA1Q8IWL2 248 aa12.11□□□□□ -0.47
SMARCE1-203ENST00000377808 SUMF1Q8NBK3 374 aa12.11□□□□□ -0.47
SMARCE1-203ENST00000377808 CLEC4CQ8WTT0 213 aa12.11□□□□□ -0.47
SMARCE1-203ENST00000377808 RUBCNQ92622 972 aa12.11□□□□□ -0.47
SMARCE1-203ENST00000377808 NELL1Q92832 810 aa12.11□□□□□ -0.47
SMARCE1-203ENST00000377808 DCLK3Q9C098 648 aa12.11□□□□□ -0.47
SMARCE1-203ENST00000377808 EPC1Q9H2F5 836 aa12.11□□□□□ -0.47
SMARCE1-203ENST00000377808 NDST4Q9H3R1 872 aa12.11□□□□□ -0.47
SMARCE1-203ENST00000377808 ACP6Q9NPH0 428 aa12.11□□□□□ -0.47
SMARCE1-203ENST00000377808 SAMSN1Q9NSI8 373 aaKnown RBP12.11□□□□□ -0.47
SMARCE1-203ENST00000377808 OLA1Q9NTK5 396 aaKnown RBP12.11□□□□□ -0.47
SMARCE1-203ENST00000377808 PLK2Q9NYY3 685 aa12.11□□□□□ -0.47
SMARCE1-203ENST00000377808 SFMBT1Q9UHJ3 866 aa12.11□□□□□ -0.47
SMARCE1-203ENST00000377808 GMEB2Q9UKD1 530 aa12.11□□□□□ -0.47
SMARCE1-203ENST00000377808 ZNF510Q9Y2H8 683 aa12.11□□□□□ -0.47
SMARCE1-203ENST00000377808 NFE2L3Q9Y4A8 694 aa12.11□□□□□ -0.47
SMARCE1-203ENST00000377808 PIEZO1Q92508 2521 aa12.11□□□□□ -0.47
SMARCE1-203ENST00000377808 ANTXRLA6NF34 631 aa12.11□□□□□ -0.47
SMARCE1-203ENST00000377808 GREM1O60565 184 aa12.11□□□□□ -0.47
SMARCE1-203ENST00000377808 TULP3O75386 442 aa12.11□□□□□ -0.47
SMARCE1-203ENST00000377808 KLF8O95600 359 aaPredicted RBP12.11□□□□□ -0.47
SMARCE1-203ENST00000377808 MBD3O95983 291 aa12.11□□□□□ -0.47
SMARCE1-203ENST00000377808 TPM2P07951 284 aa12.11□□□□□ -0.47
SMARCE1-203ENST00000377808 TYRP14679 529 aa12.11□□□□□ -0.47
SMARCE1-203ENST00000377808 MESP2Q0VG99 397 aa12.11□□□□□ -0.47
SMARCE1-203ENST00000377808 RAPGEF1Q13905 1077 aa12.11□□□□□ -0.47
SMARCE1-203ENST00000377808 C10orf76Q5T2E6 689 aa12.11□□□□□ -0.47
SMARCE1-203ENST00000377808 NUDT18Q6ZVK8 323 aa12.11□□□□□ -0.47
SMARCE1-203ENST00000377808 SYT13Q7L8C5 426 aa12.11□□□□□ -0.47
SMARCE1-203ENST00000377808 BHLHA9Q7RTU4 235 aa12.11□□□□□ -0.47
SMARCE1-203ENST00000377808 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.11□□□□□ -0.47
SMARCE1-203ENST00000377808 WDR5BQ86VZ2 330 aa12.11□□□□□ -0.47
SMARCE1-203ENST00000377808 PASD1Q8IV76 773 aa12.11□□□□□ -0.47
SMARCE1-203ENST00000377808 DCLK2Q8N568 766 aa12.11□□□□□ -0.47
SMARCE1-203ENST00000377808 ALLCQ8N6M5 410 aa12.11□□□□□ -0.47
SMARCE1-203ENST00000377808 TSTD1Q8NFU3 115 aa12.11□□□□□ -0.47
SMARCE1-203ENST00000377808 USP33Q8TEY7 942 aa12.11□□□□□ -0.47
SMARCE1-203ENST00000377808 SLC35F5Q8WV83 523 aa12.11□□□□□ -0.47
SMARCE1-203ENST00000377808 FAM149B1Q96BN6 582 aa12.11□□□□□ -0.47
SMARCE1-203ENST00000377808 PLD4Q96BZ4 506 aa12.11□□□□□ -0.47
SMARCE1-203ENST00000377808 HSFY1Q96LI6 401 aa12.11□□□□□ -0.47
SMARCE1-203ENST00000377808 ABCC13Q9NSE7 274 aa12.11□□□□□ -0.47
SMARCE1-203ENST00000377808 TAB2Q9NYJ8 693 aa12.11□□□□□ -0.47
SMARCE1-203ENST00000377808 WDR35Q9P2L0 1181 aa12.11□□□□□ -0.47
SMARCE1-203ENST00000377808 DNAJC12Q9UKB3 198 aa12.11□□□□□ -0.47
SMARCE1-203ENST00000377808 MYOFQ9NZM1 2061 aa12.1□□□□□ -0.47
SMARCE1-203ENST00000377808 ZFHX2Q9C0A1 2572 aaPredicted RBP12.1□□□□□ -0.47
SMARCE1-203ENST00000377808 FANCMQ8IYD8 2048 aa12.1□□□□□ -0.47
SMARCE1-203ENST00000377808 TRIM24O15164 1050 aa12.1□□□□□ -0.47
SMARCE1-203ENST00000377808 MSI1O43347 362 aaKnown RBP12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms