RNA–Protein interactions for RNA: ENST00000377575.2

HMGN4-201, Transcript of high mobility group nucleosomal binding domain 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN4, Length 1,225 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4-201ENST00000377575 SCML4Q8N228 414 aa17.64■□□□□ 0.41
HMGN4-201ENST00000377575 CAMKK1Q8N5S9 505 aa17.64■□□□□ 0.41
HMGN4-201ENST00000377575 CRACR2AQ9BSW2 395 aa17.64■□□□□ 0.41
HMGN4-201ENST00000377575 DCLK3Q9C098 648 aa17.64■□□□□ 0.41
HMGN4-201ENST00000377575 ARHGEF4Q9NR80 690 aa17.64■□□□□ 0.41
HMGN4-201ENST00000377575 MARCH2Q9P0N8 246 aa17.64■□□□□ 0.41
HMGN4-201ENST00000377575 NCDNQ9UBB6 729 aa17.64■□□□□ 0.41
HMGN4-201ENST00000377575 APEX2Q9UBZ4 518 aa17.64■□□□□ 0.41
HMGN4-201ENST00000377575 CNTN6Q9UQ52 1028 aa17.64■□□□□ 0.41
HMGN4-201ENST00000377575 GVINP1Q7Z2Y8 2422 aa17.64■□□□□ 0.41
HMGN4-201ENST00000377575 ZNF292O60281 2723 aa17.63■□□□□ 0.41
HMGN4-201ENST00000377575 WDR87Q6ZQQ6 2873 aa17.63■□□□□ 0.41
HMGN4-201ENST00000377575 SPAG17Q6Q759 2223 aa17.63■□□□□ 0.41
HMGN4-201ENST00000377575 CCDC163A0A0D9SF12 145 aa17.63■□□□□ 0.41
HMGN4-201ENST00000377575 K7EQS6 105 aa17.63■□□□□ 0.41
HMGN4-201ENST00000377575 MED7O43513 233 aa17.63■□□□□ 0.41
HMGN4-201ENST00000377575 STC2O76061 302 aa17.63■□□□□ 0.41
HMGN4-201ENST00000377575 LCP1P13796 627 aa17.63■□□□□ 0.41
HMGN4-201ENST00000377575 GRIA2P42262 883 aa17.63■□□□□ 0.41
HMGN4-201ENST00000377575 SLC6A11P48066 632 aa17.63■□□□□ 0.41
HMGN4-201ENST00000377575 SEC13P55735 322 aa17.63■□□□□ 0.41
HMGN4-201ENST00000377575 DMWDQ09019 674 aa17.63■□□□□ 0.41
HMGN4-201ENST00000377575 Q6ZNB5 142 aa17.63■□□□□ 0.41
HMGN4-201ENST00000377575 NUDT18Q6ZVK8 323 aa17.63■□□□□ 0.41
HMGN4-201ENST00000377575 USP33Q8TEY7 942 aa17.63■□□□□ 0.41
HMGN4-201ENST00000377575 SLC35F5Q8WV83 523 aa17.63■□□□□ 0.41
HMGN4-201ENST00000377575 XPO6Q96QU8 1125 aaKnown RBP17.63■□□□□ 0.41
HMGN4-201ENST00000377575 WDR35Q9P2L0 1181 aa17.63■□□□□ 0.41
HMGN4-201ENST00000377575 DEC1Q9P2X7 70 aa17.63■□□□□ 0.41
HMGN4-201ENST00000377575 NEDD8-MDP1E9PL57 170 aa17.62■□□□□ 0.41
HMGN4-201ENST00000377575 PRKCSHP14314 528 aaPredicted RBP17.62■□□□□ 0.41
HMGN4-201ENST00000377575 RGS7P49802 495 aa17.62■□□□□ 0.41
HMGN4-201ENST00000377575 DAOAP59103 153 aa17.62■□□□□ 0.41
HMGN4-201ENST00000377575 MRPS21P82921 87 aaKnown RBP17.62■□□□□ 0.41
HMGN4-201ENST00000377575 DMC1Q14565 340 aa17.62■□□□□ 0.41
HMGN4-201ENST00000377575 MEA1Q16626 185 aa17.62■□□□□ 0.41
HMGN4-201ENST00000377575 HSF5Q4G112 596 aaPredicted RBP17.62■□□□□ 0.41
HMGN4-201ENST00000377575 C2orf27AQ580R0 203 aa17.62■□□□□ 0.41
HMGN4-201ENST00000377575 SMYD5Q6GMV2 418 aa17.62■□□□□ 0.41
HMGN4-201ENST00000377575 PMF1Q6P1K2 205 aa17.62■□□□□ 0.41
HMGN4-201ENST00000377575 PRR23BQ6ZRT6 265 aa17.62■□□□□ 0.41
HMGN4-201ENST00000377575 BHLHA9Q7RTU4 235 aa17.62■□□□□ 0.41
HMGN4-201ENST00000377575 TMEM25Q86YD3 366 aa17.62■□□□□ 0.41
HMGN4-201ENST00000377575 ETFBKMTQ8IXQ9 262 aa17.62■□□□□ 0.41
HMGN4-201ENST00000377575 RNF139Q8WU17 664 aa17.62■□□□□ 0.41
HMGN4-201ENST00000377575 IRGQQ8WZA9 623 aa17.62■□□□□ 0.41
HMGN4-201ENST00000377575 GOLGA1Q92805 767 aa17.62■□□□□ 0.41
HMGN4-201ENST00000377575 PLD4Q96BZ4 506 aa17.62■□□□□ 0.41
HMGN4-201ENST00000377575 HSFY1Q96LI6 401 aa17.62■□□□□ 0.41
HMGN4-201ENST00000377575 HHIPQ96QV1 700 aa17.62■□□□□ 0.41
HMGN4-201ENST00000377575 ZSWIM1Q9BR11 485 aa17.62■□□□□ 0.41
HMGN4-201ENST00000377575 BBS2Q9BXC9 721 aa17.62■□□□□ 0.41
HMGN4-201ENST00000377575 ABCC13Q9NSE7 274 aa17.62■□□□□ 0.41
HMGN4-201ENST00000377575 MARK1Q9P0L2 795 aa17.62■□□□□ 0.41
HMGN4-201ENST00000377575 GMEB2Q9UKD1 530 aa17.62■□□□□ 0.41
HMGN4-201ENST00000377575 EP300Q09472 2414 aaPredicted RBP17.62■□□□□ 0.41
HMGN4-201ENST00000377575 SLC12A8A0AV02 714 aa17.61■□□□□ 0.41
HMGN4-201ENST00000377575 CACNG3O60359 315 aa17.61■□□□□ 0.41
HMGN4-201ENST00000377575 TULP3O75386 442 aa17.61■□□□□ 0.41
HMGN4-201ENST00000377575 FBXO21O94952 628 aa17.61■□□□□ 0.41
HMGN4-201ENST00000377575 APBB3O95704 486 aa17.61■□□□□ 0.41
HMGN4-201ENST00000377575 HMBSP08397 361 aa17.61■□□□□ 0.41
HMGN4-201ENST00000377575 TYRP14679 529 aa17.61■□□□□ 0.41
HMGN4-201ENST00000377575 SLC9A1P19634 815 aa17.61■□□□□ 0.41
HMGN4-201ENST00000377575 GNA15P30679 374 aa17.61■□□□□ 0.41
HMGN4-201ENST00000377575 CORO1AP31146 461 aaKnown RBP17.61■□□□□ 0.41
HMGN4-201ENST00000377575 CHKAP35790 457 aa17.61■□□□□ 0.41
HMGN4-201ENST00000377575 TNFRSF4P43489 277 aa17.61■□□□□ 0.41
HMGN4-201ENST00000377575 SIM2Q14190 667 aaPredicted RBP17.61■□□□□ 0.41
HMGN4-201ENST00000377575 BSPRYQ5W0U4 402 aa17.61■□□□□ 0.41
HMGN4-201ENST00000377575 LAIR1Q6GTX8 287 aa17.61■□□□□ 0.41
HMGN4-201ENST00000377575 TPGS1Q6ZTW0 290 aa17.61■□□□□ 0.41
HMGN4-201ENST00000377575 NAT16Q8N8M0 369 aa17.61■□□□□ 0.41
HMGN4-201ENST00000377575 GPT2Q8TD30 523 aa17.61■□□□□ 0.41
HMGN4-201ENST00000377575 NDRG1Q92597 394 aaKnown RBP17.61■□□□□ 0.41
HMGN4-201ENST00000377575 TUBGCP2Q9BSJ2 902 aa17.61■□□□□ 0.41
HMGN4-201ENST00000377575 DNAJC17Q9NVM6 304 aaKnown RBP17.61■□□□□ 0.41
HMGN4-201ENST00000377575 MMP17Q9ULZ9 603 aa17.61■□□□□ 0.41
HMGN4-201ENST00000377575 A0A0A0MRY4 1105 aa17.6■□□□□ 0.41
HMGN4-201ENST00000377575 TBC1D3BA6NDS4 549 aa17.6■□□□□ 0.41
HMGN4-201ENST00000377575 YJEFN3A6XGL0 299 aa17.6■□□□□ 0.41
HMGN4-201ENST00000377575 E7ENQ6 273 aa17.6■□□□□ 0.41
HMGN4-201ENST00000377575 THAP12O43422 761 aa17.6■□□□□ 0.41
HMGN4-201ENST00000377575 LETM1O95202 739 aaPredicted RBP17.6■□□□□ 0.41
HMGN4-201ENST00000377575 CALCAP01258 141 aa17.6■□□□□ 0.41
HMGN4-201ENST00000377575 PON1P27169 355 aa17.6■□□□□ 0.41
HMGN4-201ENST00000377575 ARHGAP44Q17R89 818 aa17.6■□□□□ 0.41
HMGN4-201ENST00000377575 VWA3BQ502W6 1294 aa17.6■□□□□ 0.41
HMGN4-201ENST00000377575 GRAMD4Q6IC98 578 aa17.6■□□□□ 0.41
HMGN4-201ENST00000377575 GJB7Q6PEY0 223 aa17.6■□□□□ 0.41
HMGN4-201ENST00000377575 CEP68Q76N32 757 aa17.6■□□□□ 0.41
HMGN4-201ENST00000377575 TRMT11Q7Z4G4 463 aaKnown RBP17.6■□□□□ 0.41
HMGN4-201ENST00000377575 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.6■□□□□ 0.41
HMGN4-201ENST00000377575 FMNL3Q8IVF7 1028 aa17.6■□□□□ 0.41
HMGN4-201ENST00000377575 PHTF2Q8N3S3 785 aa17.6■□□□□ 0.41
HMGN4-201ENST00000377575 TERB1Q8NA31 727 aa17.6■□□□□ 0.41
HMGN4-201ENST00000377575 TSTD1Q8NFU3 115 aa17.6■□□□□ 0.41
HMGN4-201ENST00000377575 NDST4Q9H3R1 872 aa17.6■□□□□ 0.41
HMGN4-201ENST00000377575 HBS1LQ9Y450 684 aaKnown RBP17.6■□□□□ 0.41
HMGN4-201ENST00000377575 MYO18AQ92614 2054 aaKnown RBP17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms