RNA–Protein interactions for RNA: ENST00000377107.6

USP11-204, Transcript of ubiquitin specific peptidase 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP11, Length 3,515 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-204ENST00000377107 GCKP35557 465 aa13.4□□□□□ -0.26
USP11-204ENST00000377107 PGM1P36871 562 aa13.4□□□□□ -0.26
USP11-204ENST00000377107 RPL10AP62906 217 aaKnown RBP13.4□□□□□ -0.26
USP11-204ENST00000377107 RASA2Q15283 850 aa13.4□□□□□ -0.26
USP11-204ENST00000377107 TTC39BQ5VTQ0 682 aaPredicted RBP13.4□□□□□ -0.26
USP11-204ENST00000377107 ASRGL1Q7L266 308 aa13.4□□□□□ -0.26
USP11-204ENST00000377107 RELL1Q8IUW5 271 aa13.4□□□□□ -0.26
USP11-204ENST00000377107 NIPA2Q8N8Q9 360 aa13.4□□□□□ -0.26
USP11-204ENST00000377107 SLC16A10Q8TF71 515 aa13.4□□□□□ -0.26
USP11-204ENST00000377107 USP6NLQ92738 828 aa13.4□□□□□ -0.26
USP11-204ENST00000377107 E2F7Q96AV8 911 aa13.4□□□□□ -0.26
USP11-204ENST00000377107 OPTNQ96CV9 577 aa13.4□□□□□ -0.26
USP11-204ENST00000377107 L3MBTL3Q96JM7 780 aaPredicted RBP13.4□□□□□ -0.26
USP11-204ENST00000377107 CLPTM1LQ96KA5 538 aa13.4□□□□□ -0.26
USP11-204ENST00000377107 OSBPL1AQ9BXW6 950 aa13.4□□□□□ -0.26
USP11-204ENST00000377107 GEMIN8Q9NWZ8 242 aaKnown RBP13.4□□□□□ -0.26
USP11-204ENST00000377107 H3BRB1 525 aa13.4□□□□□ -0.26
USP11-204ENST00000377107 KRT36O76013 467 aa13.4□□□□□ -0.26
USP11-204ENST00000377107 KRT38O76015 456 aa13.4□□□□□ -0.26
USP11-204ENST00000377107 PTPN4P29074 926 aa13.4□□□□□ -0.26
USP11-204ENST00000377107 RIPK1Q13546 671 aa13.4□□□□□ -0.26
USP11-204ENST00000377107 THOC5Q13769 683 aaKnown RBP13.4□□□□□ -0.26
USP11-204ENST00000377107 KHDC1Q4VXA5 237 aaKnown RBP13.4□□□□□ -0.26
USP11-204ENST00000377107 FAM47CQ5HY64 1035 aa13.4□□□□□ -0.26
USP11-204ENST00000377107 POU5F2Q8N7G0 328 aa13.4□□□□□ -0.26
USP11-204ENST00000377107 SMC1BQ8NDV3 1235 aa13.4□□□□□ -0.26
USP11-204ENST00000377107 SLC7A6OSQ96CW6 309 aaPredicted RBP13.4□□□□□ -0.26
USP11-204ENST00000377107 NSL1Q96IY1 281 aa13.4□□□□□ -0.26
USP11-204ENST00000377107 THTPAQ9BU02 230 aa13.4□□□□□ -0.26
USP11-204ENST00000377107 SNX25Q9H3E2 840 aa13.4□□□□□ -0.26
USP11-204ENST00000377107 TUT1Q9H6E5 874 aaKnown RBP13.4□□□□□ -0.26
USP11-204ENST00000377107 YY1AP1Q9H869 796 aa13.4□□□□□ -0.26
USP11-204ENST00000377107 RNF181Q9P0P0 153 aa13.4□□□□□ -0.26
USP11-204ENST00000377107 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.4□□□□□ -0.26
USP11-204ENST00000377107 LYPLA1O75608 230 aaPredicted RBP13.4□□□□□ -0.26
USP11-204ENST00000377107 CSH1P0DML2 217 aa13.4□□□□□ -0.26
USP11-204ENST00000377107 CSH2P0DML3 217 aa13.4□□□□□ -0.26
USP11-204ENST00000377107 EPHB1P54762 984 aa13.4□□□□□ -0.26
USP11-204ENST00000377107 EML3Q32P44 896 aa13.4□□□□□ -0.26
USP11-204ENST00000377107 BOLA3Q53S33 107 aa13.4□□□□□ -0.26
USP11-204ENST00000377107 CDCA2Q69YH5 1023 aaPredicted RBP13.4□□□□□ -0.26
USP11-204ENST00000377107 TTC30AQ86WT1 665 aa13.4□□□□□ -0.26
USP11-204ENST00000377107 LRMDAQ9H2I8 198 aa13.4□□□□□ -0.26
USP11-204ENST00000377107 RNPEPL1Q9HAU8 725 aa13.4□□□□□ -0.26
USP11-204ENST00000377107 AP4E1Q9UPM8 1137 aa13.4□□□□□ -0.26
USP11-204ENST00000377107 LOC100653049A0A140TA62 436 aa13.39□□□□□ -0.27
USP11-204ENST00000377107 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.39□□□□□ -0.27
USP11-204ENST00000377107 CAPN9O14815 690 aa13.39□□□□□ -0.27
USP11-204ENST00000377107 CCDC22O60826 627 aa13.39□□□□□ -0.27
USP11-204ENST00000377107 KRT34O76011 436 aa13.39□□□□□ -0.27
USP11-204ENST00000377107 GOT1P17174 413 aa13.39□□□□□ -0.27
USP11-204ENST00000377107 ARL4AP40617 200 aa13.39□□□□□ -0.27
USP11-204ENST00000377107 ACVR2BQ13705 512 aa13.39□□□□□ -0.27
USP11-204ENST00000377107 EFCAB3Q8N7B9 438 aa13.39□□□□□ -0.27
USP11-204ENST00000377107 DNAAF3Q8N9W5 541 aa13.39□□□□□ -0.27
USP11-204ENST00000377107 RNF169Q8NCN4 708 aa13.39□□□□□ -0.27
USP11-204ENST00000377107 SLC44A1Q8WWI5 657 aa13.39□□□□□ -0.27
USP11-204ENST00000377107 PGBD4Q96DM1 585 aa13.39□□□□□ -0.27
USP11-204ENST00000377107 MCRS1Q96EZ8 462 aa13.39□□□□□ -0.27
USP11-204ENST00000377107 GOLGA8TH3BQL2 631 aa13.39□□□□□ -0.27
USP11-204ENST00000377107 TM9SF1O15321 606 aa13.39□□□□□ -0.27
USP11-204ENST00000377107 PAPSS1O43252 624 aaPredicted RBP13.39□□□□□ -0.27
USP11-204ENST00000377107 C22orf31O95567 290 aa13.39□□□□□ -0.27
USP11-204ENST00000377107 NCF2P19878 526 aaPredicted RBP13.39□□□□□ -0.27
USP11-204ENST00000377107 LMO2P25791 158 aa13.39□□□□□ -0.27
USP11-204ENST00000377107 SLC45A4Q5BKX6 768 aa13.39□□□□□ -0.27
USP11-204ENST00000377107 ZNF618Q5T7W0 954 aa13.39□□□□□ -0.27
USP11-204ENST00000377107 CRLF3Q8IUI8 442 aa13.39□□□□□ -0.27
USP11-204ENST00000377107 ALKBH8Q96BT7 664 aaKnown RBP13.39□□□□□ -0.27
USP11-204ENST00000377107 NAF1Q96HR8 494 aaKnown RBP13.39□□□□□ -0.27
USP11-204ENST00000377107 EIF2AQ9BY44 585 aaKnown RBP13.39□□□□□ -0.27
USP11-204ENST00000377107 UBP1Q9NZI7 540 aa13.39□□□□□ -0.27
USP11-204ENST00000377107 DNAH12Q6ZR08 3092 aa13.39□□□□□ -0.27
USP11-204ENST00000377107 CLDN5O00501 218 aa13.39□□□□□ -0.27
USP11-204ENST00000377107 C2CD2LO14523 706 aa13.39□□□□□ -0.27
USP11-204ENST00000377107 CCNB1P14635 433 aa13.39□□□□□ -0.27
USP11-204ENST00000377107 PTDSS1P48651 473 aaKnown RBP13.39□□□□□ -0.27
USP11-204ENST00000377107 PRAMEF19Q5SWL8 479 aa13.39□□□□□ -0.27
USP11-204ENST00000377107 UNC5AQ6ZN44 842 aa13.39□□□□□ -0.27
USP11-204ENST00000377107 RINLQ6ZS11 566 aa13.39□□□□□ -0.27
USP11-204ENST00000377107 BZW1Q7L1Q6 419 aaKnown RBP13.39□□□□□ -0.27
USP11-204ENST00000377107 PLPPR4Q7Z2D5 763 aa13.39□□□□□ -0.27
USP11-204ENST00000377107 PID1Q7Z2X4 250 aa13.39□□□□□ -0.27
USP11-204ENST00000377107 EXOC8Q8IYI6 725 aa13.39□□□□□ -0.27
USP11-204ENST00000377107 STK32AQ8WU08 396 aa13.39□□□□□ -0.27
USP11-204ENST00000377107 CADM1Q9BY67 442 aaKnown RBP13.39□□□□□ -0.27
USP11-204ENST00000377107 PTPRHQ9HD43 1115 aa13.39□□□□□ -0.27
USP11-204ENST00000377107 PIN4Q9Y237 131 aaKnown RBP13.39□□□□□ -0.27
USP11-204ENST00000377107 TIMM13Q9Y5L4 95 aaPredicted RBP13.39□□□□□ -0.27
USP11-204ENST00000377107 DYNC1LI2O43237 492 aaPredicted RBP13.38□□□□□ -0.27
USP11-204ENST00000377107 ATP9BO43861 1147 aa13.38□□□□□ -0.27
USP11-204ENST00000377107 GAS2O43903 313 aaKnown RBP13.38□□□□□ -0.27
USP11-204ENST00000377107 CALB2P22676 271 aa13.38□□□□□ -0.27
USP11-204ENST00000377107 CDH5P33151 784 aaPredicted RBP13.38□□□□□ -0.27
USP11-204ENST00000377107 MLH1P40692 756 aa13.38□□□□□ -0.27
USP11-204ENST00000377107 TSNAXIP1Q2TAA8 658 aa13.38□□□□□ -0.27
USP11-204ENST00000377107 KDELC2Q7Z4H8 507 aa13.38□□□□□ -0.27
USP11-204ENST00000377107 CCDC185Q8N715 623 aa13.38□□□□□ -0.27
USP11-204ENST00000377107 SLC2A14Q8TDB8 520 aa13.38□□□□□ -0.27
USP11-204ENST00000377107 OXNAD1Q96HP4 312 aaPredicted RBP13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms