RNA–Protein interactions for RNA: ENST00000376957.6

SRM-201, Transcript of spermidine synthase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRM, Length 1,266 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRM-201ENST00000376957 NOX5Q96PH1 765 aa23.16■■□□□ 1.3
SRM-201ENST00000376957 PHOX2BQ99453 314 aa23.16■■□□□ 1.3
SRM-201ENST00000376957 CACNA1IQ9P0X4 2223 aa23.16■■□□□ 1.3
SRM-201ENST00000376957 RNF40O75150 1001 aa23.15■■□□□ 1.3
SRM-201ENST00000376957 KRT9P35527 623 aa23.15■■□□□ 1.3
SRM-201ENST00000376957 HARS2P49590 506 aaKnown RBP23.15■■□□□ 1.3
SRM-201ENST00000376957 RGS7P49802 495 aa23.15■■□□□ 1.3
SRM-201ENST00000376957 MIIPQ5JXC2 388 aa23.15■■□□□ 1.3
SRM-201ENST00000376957 Q6ZS52 159 aa23.15■■□□□ 1.3
SRM-201ENST00000376957 PLD4Q96BZ4 506 aa23.15■■□□□ 1.3
SRM-201ENST00000376957 DEC1Q9P2X7 70 aa23.15■■□□□ 1.3
SRM-201ENST00000376957 R4GN57 208 aa23.15■■□□□ 1.3
SRM-201ENST00000376957 SLC12A8A0AV02 714 aa23.14■■□□□ 1.29
SRM-201ENST00000376957 CHURC1-FNTBB4DL54 471 aa23.14■■□□□ 1.29
SRM-201ENST00000376957 MDM4O15151 490 aa23.14■■□□□ 1.29
SRM-201ENST00000376957 HOXC11O43248 304 aaPredicted RBP23.14■■□□□ 1.29
SRM-201ENST00000376957 STC2O76061 302 aa23.14■■□□□ 1.29
SRM-201ENST00000376957 LMNAP02545 664 aaKnown RBP23.14■■□□□ 1.29
SRM-201ENST00000376957 DAOAP59103 153 aa23.14■■□□□ 1.29
SRM-201ENST00000376957 GJB7Q6PEY0 223 aa23.14■■□□□ 1.29
SRM-201ENST00000376957 TSSK4Q6SA08 328 aa23.14■■□□□ 1.29
SRM-201ENST00000376957 BBS2Q9BXC9 721 aa23.14■■□□□ 1.29
SRM-201ENST00000376957 PDCL3Q9H2J4 239 aa23.14■■□□□ 1.29
SRM-201ENST00000376957 HBS1LQ9Y450 684 aaKnown RBP23.14■■□□□ 1.29
SRM-201ENST00000376957 CACNA1HO95180 2353 aa23.14■■□□□ 1.29
SRM-201ENST00000376957 YJEFN3A6XGL0 299 aa23.13■■□□□ 1.29
SRM-201ENST00000376957 E7ENQ6 273 aa23.13■■□□□ 1.29
SRM-201ENST00000376957 CYBBP04839 570 aa23.13■■□□□ 1.29
SRM-201ENST00000376957 CNR2P34972 360 aa23.13■■□□□ 1.29
SRM-201ENST00000376957 OPRD1P41143 372 aa23.13■■□□□ 1.29
SRM-201ENST00000376957 GRIA2P42262 883 aa23.13■■□□□ 1.29
SRM-201ENST00000376957 GPD2P43304 727 aa23.13■■□□□ 1.29
SRM-201ENST00000376957 SATB1Q01826 763 aa23.13■■□□□ 1.29
SRM-201ENST00000376957 RAPGEF1Q13905 1077 aa23.13■■□□□ 1.29
SRM-201ENST00000376957 CDKAL1Q5VV42 579 aa23.13■■□□□ 1.29
SRM-201ENST00000376957 ZSWIM1Q9BR11 485 aa23.13■■□□□ 1.29
SRM-201ENST00000376957 FBRSL1Q9HCM7 1045 aaKnown RBP23.13■■□□□ 1.29
SRM-201ENST00000376957 ARHGEF4Q9NR80 690 aa23.13■■□□□ 1.29
SRM-201ENST00000376957 FANCLQ9NW38 375 aa23.13■■□□□ 1.29
SRM-201ENST00000376957 TAB2Q9NYJ8 693 aa23.13■■□□□ 1.29
SRM-201ENST00000376957 RAB23Q9ULC3 237 aa23.13■■□□□ 1.29
SRM-201ENST00000376957 NEDD8-MDP1E9PL57 170 aa23.12■■□□□ 1.29
SRM-201ENST00000376957 KAT7O95251 611 aa23.12■■□□□ 1.29
SRM-201ENST00000376957 LTFP02788 710 aa23.12■■□□□ 1.29
SRM-201ENST00000376957 HMBSP08397 361 aa23.12■■□□□ 1.29
SRM-201ENST00000376957 CORO1AP31146 461 aaKnown RBP23.12■■□□□ 1.29
SRM-201ENST00000376957 HOXA6P31267 233 aa23.12■■□□□ 1.29
SRM-201ENST00000376957 TNFRSF4P43489 277 aa23.12■■□□□ 1.29
SRM-201ENST00000376957 GAS6Q14393 721 aa23.12■■□□□ 1.29
SRM-201ENST00000376957 HSF5Q4G112 596 aaPredicted RBP23.12■■□□□ 1.29
SRM-201ENST00000376957 TMEM25Q86YD3 366 aa23.12■■□□□ 1.29
SRM-201ENST00000376957 CAMKK1Q8N5S9 505 aa23.12■■□□□ 1.29
SRM-201ENST00000376957 ZBTB44Q8NCP5 570 aa23.12■■□□□ 1.29
SRM-201ENST00000376957 RPLP0P6Q8NHW5 317 aa23.12■■□□□ 1.29
SRM-201ENST00000376957 EDEM1Q92611 657 aa23.12■■□□□ 1.29
SRM-201ENST00000376957 MIS12Q9H081 205 aa23.12■■□□□ 1.29
SRM-201ENST00000376957 VPS16Q9H269 839 aa23.12■■□□□ 1.29
SRM-201ENST00000376957 DAAM1Q9Y4D1 1078 aa23.12■■□□□ 1.29
SRM-201ENST00000376957 TBC1D3BA6NDS4 549 aa23.11■■□□□ 1.29
SRM-201ENST00000376957 CAPN9O14815 690 aa23.11■■□□□ 1.29
SRM-201ENST00000376957 ZNF445P59923 1031 aa23.11■■□□□ 1.29
SRM-201ENST00000376957 MRPS21P82921 87 aaKnown RBP23.11■■□□□ 1.29
SRM-201ENST00000376957 TYRO3Q06418 890 aa23.11■■□□□ 1.29
SRM-201ENST00000376957 TPGS1Q6ZTW0 290 aa23.11■■□□□ 1.29
SRM-201ENST00000376957 LONP2Q86WA8 852 aa23.11■■□□□ 1.29
SRM-201ENST00000376957 FMNL3Q8IVF7 1028 aa23.11■■□□□ 1.29
SRM-201ENST00000376957 KCNV2Q8TDN2 545 aa23.11■■□□□ 1.29
SRM-201ENST00000376957 NDRG1Q92597 394 aaKnown RBP23.11■■□□□ 1.29
SRM-201ENST00000376957 NELL1Q92832 810 aa23.11■■□□□ 1.29
SRM-201ENST00000376957 FAM149B1Q96BN6 582 aa23.11■■□□□ 1.29
SRM-201ENST00000376957 SIX2Q9NPC8 291 aa23.11■■□□□ 1.29
SRM-201ENST00000376957 MARK1Q9P0L2 795 aa23.11■■□□□ 1.29
SRM-201ENST00000376957 PRR23AA6NEV1 266 aa23.1■■□□□ 1.29
SRM-201ENST00000376957 SMTNL1A8MU46 457 aa23.1■■□□□ 1.29
SRM-201ENST00000376957 BECN2A8MW95 431 aa23.1■■□□□ 1.29
SRM-201ENST00000376957 FOXN3O00409 490 aaPredicted RBP23.1■■□□□ 1.29
SRM-201ENST00000376957 PIK3R2O00459 728 aa23.1■■□□□ 1.29
SRM-201ENST00000376957 GREM1O60565 184 aa23.1■■□□□ 1.29
SRM-201ENST00000376957 NCAM1P13591 858 aa23.1■■□□□ 1.29
SRM-201ENST00000376957 TYRP14679 529 aa23.1■■□□□ 1.29
SRM-201ENST00000376957 KRT31Q15323 416 aa23.1■■□□□ 1.29
SRM-201ENST00000376957 E2F5Q15329 346 aa23.1■■□□□ 1.29
SRM-201ENST00000376957 KLHDC7AQ5VTJ3 777 aa23.1■■□□□ 1.29
SRM-201ENST00000376957 CAVIN1Q6NZI2 390 aaKnown RBP23.1■■□□□ 1.29
SRM-201ENST00000376957 DENND1BQ6P3S1 775 aa23.1■■□□□ 1.29
SRM-201ENST00000376957 Q6ZNB5 142 aa23.1■■□□□ 1.29
SRM-201ENST00000376957 C11orf57Q6ZUT1 292 aaPredicted RBP23.1■■□□□ 1.29
SRM-201ENST00000376957 SYT13Q7L8C5 426 aa23.1■■□□□ 1.29
SRM-201ENST00000376957 TRMT11Q7Z4G4 463 aaKnown RBP23.1■■□□□ 1.29
SRM-201ENST00000376957 DENND1CQ8IV53 801 aa23.1■■□□□ 1.29
SRM-201ENST00000376957 UNC45BQ8IWX7 931 aa23.1■■□□□ 1.29
SRM-201ENST00000376957 SCUBE3Q8IX30 993 aa23.1■■□□□ 1.29
SRM-201ENST00000376957 NAT16Q8N8M0 369 aa23.1■■□□□ 1.29
SRM-201ENST00000376957 PCMTD1Q96MG8 357 aaPredicted RBP23.1■■□□□ 1.29
SRM-201ENST00000376957 LSM14BQ9BX40 385 aaKnown RBP23.1■■□□□ 1.29
SRM-201ENST00000376957 LHX5Q9H2C1 402 aa23.1■■□□□ 1.29
SRM-201ENST00000376957 PLCB1Q9NQ66 1216 aa23.1■■□□□ 1.29
SRM-201ENST00000376957 PCDHGC3Q9UN70 934 aa23.1■■□□□ 1.29
SRM-201ENST00000376957 A0A0A0MRY4 1105 aa23.09■■□□□ 1.29
SRM-201ENST00000376957 TULP3O75386 442 aa23.09■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms