RNA–Protein interactions for RNA: ENST00000376709.8

VSX1-202, Transcript of visual system homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VSX1, Length 2,192 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-202ENST00000376709 CCT8L1PA6NM43 557 aa21■□□□□ 0.95
VSX1-202ENST00000376709 PRPF4O43172 522 aaKnown RBP eCLIP21■□□□□ 0.95
VSX1-202ENST00000376709 PIAS1O75925 651 aa21■□□□□ 0.95
VSX1-202ENST00000376709 GJA9P57773 515 aa21■□□□□ 0.95
VSX1-202ENST00000376709 TRIM32Q13049 653 aa21■□□□□ 0.95
VSX1-202ENST00000376709 MFSD14CQ5VZR4 134 aa21■□□□□ 0.95
VSX1-202ENST00000376709 FUKQ8N0W3 1084 aa21■□□□□ 0.95
VSX1-202ENST00000376709 CCDC185Q8N715 623 aa21■□□□□ 0.95
VSX1-202ENST00000376709 PPP1R10Q96QC0 940 aaKnown RBP21■□□□□ 0.95
VSX1-202ENST00000376709 HNRNPABQ99729 332 aaKnown RBP21■□□□□ 0.95
VSX1-202ENST00000376709 MTG1Q9BT17 334 aaPredicted RBP21■□□□□ 0.95
VSX1-202ENST00000376709 DUSP16Q9BY84 665 aa21■□□□□ 0.95
VSX1-202ENST00000376709 KLC2Q9H0B6 622 aa21■□□□□ 0.95
VSX1-202ENST00000376709 KDM4CQ9H3R0 1056 aa21■□□□□ 0.95
VSX1-202ENST00000376709 CDY2AQ9Y6F7 541 aa21■□□□□ 0.95
VSX1-202ENST00000376709 RARBP10826 455 aa21■□□□□ 0.95
VSX1-202ENST00000376709 ZFXP17010 805 aaPredicted RBP21■□□□□ 0.95
VSX1-202ENST00000376709 FLT3LGP49771 235 aa21■□□□□ 0.95
VSX1-202ENST00000376709 NBPF20Q3BBV1 942 aa21■□□□□ 0.95
VSX1-202ENST00000376709 WSCD1Q658N2 575 aa21■□□□□ 0.95
VSX1-202ENST00000376709 CDKL3Q8IVW4 592 aaPredicted RBP21■□□□□ 0.95
VSX1-202ENST00000376709 LRRN4Q8WUT4 740 aa21■□□□□ 0.95
VSX1-202ENST00000376709 HTTP42858 3142 aa20.99■□□□□ 0.95
VSX1-202ENST00000376709 DNM1LO00429 736 aa20.99■□□□□ 0.95
VSX1-202ENST00000376709 CLDN5O00501 218 aa20.99■□□□□ 0.95
VSX1-202ENST00000376709 TSHRP16473 764 aa20.99■□□□□ 0.95
VSX1-202ENST00000376709 NPR3P17342 541 aa20.99■□□□□ 0.95
VSX1-202ENST00000376709 PTPN1P18031 435 aaKnown RBP20.99■□□□□ 0.95
VSX1-202ENST00000376709 CA4P22748 312 aa20.99■□□□□ 0.95
VSX1-202ENST00000376709 GBP2P32456 591 aaPredicted RBP20.99■□□□□ 0.95
VSX1-202ENST00000376709 MATKP42679 507 aa20.99■□□□□ 0.95
VSX1-202ENST00000376709 MSH2P43246 934 aa20.99■□□□□ 0.95
VSX1-202ENST00000376709 FAXCQ5TGI0 409 aa20.99■□□□□ 0.95
VSX1-202ENST00000376709 STRADAQ7RTN6 431 aa20.99■□□□□ 0.95
VSX1-202ENST00000376709 MED10Q9BTT4 135 aa20.99■□□□□ 0.95
VSX1-202ENST00000376709 USP15Q9Y4E8 981 aaPredicted RBP20.99■□□□□ 0.95
VSX1-202ENST00000376709 A0A1W2PPM1 405 aa20.99■□□□□ 0.95
VSX1-202ENST00000376709 MEIS3P2A8K0S8 358 aa20.99■□□□□ 0.95
VSX1-202ENST00000376709 KRT4P19013 534 aa20.99■□□□□ 0.95
VSX1-202ENST00000376709 MLH1P40692 756 aa20.99■□□□□ 0.95
VSX1-202ENST00000376709 SULT1E1P49888 294 aa20.99■□□□□ 0.95
VSX1-202ENST00000376709 WDR4P57081 412 aaKnown RBP20.99■□□□□ 0.95
VSX1-202ENST00000376709 GBE1Q04446 702 aa20.99■□□□□ 0.95
VSX1-202ENST00000376709 GDF6Q6KF10 455 aaPredicted RBP20.99■□□□□ 0.95
VSX1-202ENST00000376709 ADGRD1Q6QNK2 874 aa20.99■□□□□ 0.95
VSX1-202ENST00000376709 RSPH3Q86UC2 560 aa20.99■□□□□ 0.95
VSX1-202ENST00000376709 FAM131BQ86XD5 332 aa20.99■□□□□ 0.95
VSX1-202ENST00000376709 IGDCC3Q8IVU1 814 aa20.99■□□□□ 0.95
VSX1-202ENST00000376709 DEFB106AQ8N104 65 aa20.99■□□□□ 0.95
VSX1-202ENST00000376709 CCDC110Q8TBZ0 833 aa20.99■□□□□ 0.95
VSX1-202ENST00000376709 NDRG1Q92597 394 aaKnown RBP20.99■□□□□ 0.95
VSX1-202ENST00000376709 WNT8BQ93098 351 aa20.99■□□□□ 0.95
VSX1-202ENST00000376709 CSPG4P5Q96PW8 444 aa20.99■□□□□ 0.95
VSX1-202ENST00000376709 KCTD15Q96SI1 283 aaPredicted RBP20.99■□□□□ 0.95
VSX1-202ENST00000376709 CYTH2Q99418 400 aa20.99■□□□□ 0.95
VSX1-202ENST00000376709 MAGEB5Q9BZ81 275 aa20.99■□□□□ 0.95
VSX1-202ENST00000376709 TSPYL2Q9H2G4 693 aaPredicted RBP20.99■□□□□ 0.95
VSX1-202ENST00000376709 SLC38A7Q9NVC3 462 aa20.99■□□□□ 0.95
VSX1-202ENST00000376709 GTF2IRD1Q9UHL9 959 aa20.99■□□□□ 0.95
VSX1-202ENST00000376709 ST3GAL5Q9UNP4 418 aa20.99■□□□□ 0.95
VSX1-202ENST00000376709 KBTBD13C9JR72 458 aa20.98■□□□□ 0.95
VSX1-202ENST00000376709 KPNA6O60684 536 aa20.98■□□□□ 0.95
VSX1-202ENST00000376709 AVILO75366 819 aa20.98■□□□□ 0.95
VSX1-202ENST00000376709 APRTP07741 180 aa20.98■□□□□ 0.95
VSX1-202ENST00000376709 CTSHP09668 335 aa20.98■□□□□ 0.95
VSX1-202ENST00000376709 RPA3P35244 121 aaPredicted RBP20.98■□□□□ 0.95
VSX1-202ENST00000376709 NR2C2P49116 596 aa20.98■□□□□ 0.95
VSX1-202ENST00000376709 SLC18A1P54219 525 aa20.98■□□□□ 0.95
VSX1-202ENST00000376709 YWHAGP61981 247 aaKnown RBP eCLIP20.98■□□□□ 0.95
VSX1-202ENST00000376709 SPARCL1Q14515 664 aa20.98■□□□□ 0.95
VSX1-202ENST00000376709 SLC25A52Q3SY17 297 aa20.98■□□□□ 0.95
VSX1-202ENST00000376709 DCAF6Q58WW2 860 aa20.98■□□□□ 0.95
VSX1-202ENST00000376709 HACE1Q8IYU2 909 aa20.98■□□□□ 0.95
VSX1-202ENST00000376709 CNPY4Q8N129 248 aa20.98■□□□□ 0.95
VSX1-202ENST00000376709 LRRC4Q9HBW1 653 aa20.98■□□□□ 0.95
VSX1-202ENST00000376709 FAM105AQ9NUU6 356 aa20.98■□□□□ 0.95
VSX1-202ENST00000376709 ETNK2Q9NVF9 386 aa20.98■□□□□ 0.95
VSX1-202ENST00000376709 MTMR10Q9NXD2 777 aa20.98■□□□□ 0.95
VSX1-202ENST00000376709 CACNG4Q9UBN1 327 aa20.98■□□□□ 0.95
VSX1-202ENST00000376709 TRPV2Q9Y5S1 764 aa20.98■□□□□ 0.95
VSX1-202ENST00000376709 TEX264Q9Y6I9 313 aa20.98■□□□□ 0.95
VSX1-202ENST00000376709 CEP350Q5VT06 3117 aa20.98■□□□□ 0.95
VSX1-202ENST00000376709 SUN1O94901 812 aa20.97■□□□□ 0.95
VSX1-202ENST00000376709 ASMTLO95671 621 aa20.97■□□□□ 0.95
VSX1-202ENST00000376709 ARL4AP40617 200 aa20.97■□□□□ 0.95
VSX1-202ENST00000376709 PRKCZQ05513 592 aa20.97■□□□□ 0.95
VSX1-202ENST00000376709 LACTB2Q53H82 288 aaPredicted RBP20.97■□□□□ 0.95
VSX1-202ENST00000376709 MDH1BQ5I0G3 518 aa20.97■□□□□ 0.95
VSX1-202ENST00000376709 SIX6OS1Q8N1H7 587 aa20.97■□□□□ 0.95
VSX1-202ENST00000376709 DHRS4Q9BTZ2 278 aa20.97■□□□□ 0.95
VSX1-202ENST00000376709 FRMD8Q9BZ67 464 aaPredicted RBP20.97■□□□□ 0.95
VSX1-202ENST00000376709 TMEM51Q9NW97 253 aa20.97■□□□□ 0.95
VSX1-202ENST00000376709 IKBKGQ9Y6K9 419 aa20.97■□□□□ 0.95
VSX1-202ENST00000376709 CAPN15O75808 1086 aa20.97■□□□□ 0.95
VSX1-202ENST00000376709 BEST1O76090 585 aa20.97■□□□□ 0.95
VSX1-202ENST00000376709 OAS1P00973 400 aaKnown RBP20.97■□□□□ 0.95
VSX1-202ENST00000376709 YWHAZP63104 245 aaKnown RBP20.97■□□□□ 0.95
VSX1-202ENST00000376709 XRCC4Q13426 336 aa20.97■□□□□ 0.95
VSX1-202ENST00000376709 SLC45A4Q5BKX6 768 aa20.97■□□□□ 0.95
VSX1-202ENST00000376709 TRPM8Q7Z2W7 1104 aa20.97■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms