RNA–Protein interactions for RNA: ENST00000376619.6

HDAC6-203, Transcript of histone deacetylase 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC6, Length 4,179 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-203ENST00000376619 MYH7BA7E2Y1 1941 aa11.53□□□□□ -0.56
HDAC6-203ENST00000376619 STAMBPO95630 424 aa11.53□□□□□ -0.56
HDAC6-203ENST00000376619 PIRTP0C851 137 aa11.53□□□□□ -0.56
HDAC6-203ENST00000376619 PLK1P53350 603 aa11.53□□□□□ -0.56
HDAC6-203ENST00000376619 PPIL2Q13356 520 aa11.53□□□□□ -0.56
HDAC6-203ENST00000376619 CHD4Q14839 1912 aa11.53□□□□□ -0.56
HDAC6-203ENST00000376619 ANKRD12Q6UB98 2062 aa11.53□□□□□ -0.56
HDAC6-203ENST00000376619 LONP2Q86WA8 852 aa11.53□□□□□ -0.56
HDAC6-203ENST00000376619 C12orf56Q8IXR9 622 aa11.53□□□□□ -0.56
HDAC6-203ENST00000376619 KATNAL2Q8IYT4 538 aa11.53□□□□□ -0.56
HDAC6-203ENST00000376619 EFHBQ8N7U6 833 aa11.53□□□□□ -0.56
HDAC6-203ENST00000376619 TBCBQ99426 244 aa11.53□□□□□ -0.56
HDAC6-203ENST00000376619 PDZD7Q9H5P4 517 aa11.53□□□□□ -0.56
HDAC6-203ENST00000376619 ACTR5Q9H9F9 607 aaPredicted RBP11.53□□□□□ -0.56
HDAC6-203ENST00000376619 PAK5Q9P286 719 aa11.53□□□□□ -0.56
HDAC6-203ENST00000376619 SLC17A7Q9P2U7 560 aa11.53□□□□□ -0.56
HDAC6-203ENST00000376619 ZC3H4Q9UPT8 1303 aaKnown RBP11.53□□□□□ -0.56
HDAC6-203ENST00000376619 HOXC6P09630 235 aa11.52□□□□□ -0.56
HDAC6-203ENST00000376619 MCF2P10911 925 aa11.52□□□□□ -0.56
HDAC6-203ENST00000376619 TFE3P19532 575 aaPredicted RBP11.52□□□□□ -0.56
HDAC6-203ENST00000376619 CD52P31358 61 aa11.52□□□□□ -0.56
HDAC6-203ENST00000376619 YWHAZP63104 245 aaKnown RBP11.52□□□□□ -0.56
HDAC6-203ENST00000376619 PLIN5Q00G26 463 aa11.52□□□□□ -0.56
HDAC6-203ENST00000376619 FNBP1LQ5T0N5 605 aa11.52□□□□□ -0.56
HDAC6-203ENST00000376619 LAYNQ6UX15 382 aa11.52□□□□□ -0.56
HDAC6-203ENST00000376619 TFB1MQ8WVM0 346 aaKnown RBP11.52□□□□□ -0.56
HDAC6-203ENST00000376619 ART4Q93070 314 aa11.52□□□□□ -0.56
HDAC6-203ENST00000376619 RMDN1Q96DB5 314 aa11.52□□□□□ -0.56
HDAC6-203ENST00000376619 ADAM2Q99965 735 aa11.52□□□□□ -0.56
HDAC6-203ENST00000376619 SDCBP2Q9H190 292 aa11.52□□□□□ -0.56
HDAC6-203ENST00000376619 SMPD4Q9NXE4 827 aa11.52□□□□□ -0.56
HDAC6-203ENST00000376619 MYL2P10916 166 aa11.52□□□□□ -0.57
HDAC6-203ENST00000376619 PGGT1BP53609 377 aa11.52□□□□□ -0.57
HDAC6-203ENST00000376619 EFEMP1Q12805 493 aa11.52□□□□□ -0.57
HDAC6-203ENST00000376619 USP10Q14694 798 aaKnown RBP11.52□□□□□ -0.57
HDAC6-203ENST00000376619 THEM5Q8N1Q8 247 aa11.52□□□□□ -0.57
HDAC6-203ENST00000376619 CCT6BQ92526 530 aa11.52□□□□□ -0.57
HDAC6-203ENST00000376619 STAMBPL1Q96FJ0 436 aa11.52□□□□□ -0.57
HDAC6-203ENST00000376619 CAPNS2Q96L46 248 aa11.52□□□□□ -0.57
HDAC6-203ENST00000376619 CCDC68Q9H2F9 335 aa11.52□□□□□ -0.57
HDAC6-203ENST00000376619 CHST12Q9NRB3 414 aa11.52□□□□□ -0.57
HDAC6-203ENST00000376619 MEIS3P2A8K0S8 358 aa11.52□□□□□ -0.57
HDAC6-203ENST00000376619 GIPC1O14908 333 aa11.52□□□□□ -0.57
HDAC6-203ENST00000376619 CD4P01730 458 aa11.52□□□□□ -0.57
HDAC6-203ENST00000376619 GARSP41250 739 aaKnown RBP11.52□□□□□ -0.57
HDAC6-203ENST00000376619 MBTD1Q05BQ5 628 aa11.52□□□□□ -0.57
HDAC6-203ENST00000376619 WDR75Q8IWA0 830 aaKnown RBP11.52□□□□□ -0.57
HDAC6-203ENST00000376619 BRI3BPQ8WY22 251 aa11.52□□□□□ -0.57
HDAC6-203ENST00000376619 ZNF512Q96ME7 567 aaPredicted RBP11.52□□□□□ -0.57
HDAC6-203ENST00000376619 SH3GL2Q99962 352 aa11.52□□□□□ -0.57
HDAC6-203ENST00000376619 NCAPGQ9BPX3 1015 aa11.52□□□□□ -0.57
HDAC6-203ENST00000376619 ROPN1BQ9BZX4 212 aaPredicted RBP11.52□□□□□ -0.57
HDAC6-203ENST00000376619 ROPN1Q9HAT0 212 aaPredicted RBP11.52□□□□□ -0.57
HDAC6-203ENST00000376619 SCN9AQ15858 1988 aa11.52□□□□□ -0.57
HDAC6-203ENST00000376619 BTNL10A8MVZ5 291 aa11.51□□□□□ -0.57
HDAC6-203ENST00000376619 B2RBV5 119 aa11.51□□□□□ -0.57
HDAC6-203ENST00000376619 TRDMT1O14717 391 aaKnown RBP11.51□□□□□ -0.57
HDAC6-203ENST00000376619 GAS2O43903 313 aaKnown RBP11.51□□□□□ -0.57
HDAC6-203ENST00000376619 SNRPAP09012 282 aaKnown RBP11.51□□□□□ -0.57
HDAC6-203ENST00000376619 CXCR3P49682 368 aa11.51□□□□□ -0.57
HDAC6-203ENST00000376619 PSEN2P49810 448 aa11.51□□□□□ -0.57
HDAC6-203ENST00000376619 SLC26A2P50443 739 aa11.51□□□□□ -0.57
HDAC6-203ENST00000376619 TAF1BQ53T94 588 aaPredicted RBP11.51□□□□□ -0.57
HDAC6-203ENST00000376619 PLEKHA7Q6IQ23 1121 aa11.51□□□□□ -0.57
HDAC6-203ENST00000376619 NLRP9Q7RTR0 991 aa11.51□□□□□ -0.57
HDAC6-203ENST00000376619 RUBCNQ92622 972 aa11.51□□□□□ -0.57
HDAC6-203ENST00000376619 SYT15Q9BQS2 421 aa11.51□□□□□ -0.57
HDAC6-203ENST00000376619 TSPYL2Q9H2G4 693 aaPredicted RBP11.51□□□□□ -0.57
HDAC6-203ENST00000376619 PRDM12Q9H4Q4 367 aa11.51□□□□□ -0.57
HDAC6-203ENST00000376619 ASB7Q9H672 318 aa11.51□□□□□ -0.57
HDAC6-203ENST00000376619 TASP1Q9H6P5 420 aa11.51□□□□□ -0.57
HDAC6-203ENST00000376619 COL5A3P25940 1745 aaPredicted RBP11.51□□□□□ -0.57
HDAC6-203ENST00000376619 TNRC6CQ9HCJ0 1690 aaKnown RBP11.51□□□□□ -0.57
HDAC6-203ENST00000376619 ADAMTS7Q9UKP4 1686 aa11.51□□□□□ -0.57
HDAC6-203ENST00000376619 SMIM28A0A1B0GU29 152 aa11.51□□□□□ -0.57
HDAC6-203ENST00000376619 RRN3P2A6NIE6 340 aa11.51□□□□□ -0.57
HDAC6-203ENST00000376619 KIF3CO14782 793 aa11.51□□□□□ -0.57
HDAC6-203ENST00000376619 DNAJC6O75061 913 aa11.51□□□□□ -0.57
HDAC6-203ENST00000376619 CAPN15O75808 1086 aa11.51□□□□□ -0.57
HDAC6-203ENST00000376619 LSM8O95777 96 aaKnown RBP11.51□□□□□ -0.57
HDAC6-203ENST00000376619 TOP3BO95985 862 aaKnown RBP11.51□□□□□ -0.57
HDAC6-203ENST00000376619 GMPRP36959 345 aa11.51□□□□□ -0.57
HDAC6-203ENST00000376619 BCAT1P54687 386 aa11.51□□□□□ -0.57
HDAC6-203ENST00000376619 NME5P56597 212 aa11.51□□□□□ -0.57
HDAC6-203ENST00000376619 COPS2P61201 443 aa11.51□□□□□ -0.57
HDAC6-203ENST00000376619 SLC6A3Q01959 620 aa11.51□□□□□ -0.57
HDAC6-203ENST00000376619 PTK6Q13882 451 aa11.51□□□□□ -0.57
HDAC6-203ENST00000376619 SV2CQ496J9 727 aa11.51□□□□□ -0.57
HDAC6-203ENST00000376619 PHF13Q86YI8 300 aaPredicted RBP11.51□□□□□ -0.57
HDAC6-203ENST00000376619 TNS4Q8IZW8 715 aa11.51□□□□□ -0.57
HDAC6-203ENST00000376619 DDX1Q92499 740 aaKnown RBP11.51□□□□□ -0.57
HDAC6-203ENST00000376619 RAB3IPQ96QF0 476 aaPredicted RBP11.51□□□□□ -0.57
HDAC6-203ENST00000376619 CXCL16Q9H2A7 254 aa11.51□□□□□ -0.57
HDAC6-203ENST00000376619 PCDH9Q9HC56 1237 aa11.51□□□□□ -0.57
HDAC6-203ENST00000376619 TRPC7Q9HCX4 862 aa11.51□□□□□ -0.57
HDAC6-203ENST00000376619 FBXO6Q9NRD1 293 aaPredicted RBP11.51□□□□□ -0.57
HDAC6-203ENST00000376619 TXLNGQ9NUQ3 528 aa11.51□□□□□ -0.57
HDAC6-203ENST00000376619 SFMBT1Q9UHJ3 866 aa11.51□□□□□ -0.57
HDAC6-203ENST00000376619 SLC27A5Q9Y2P5 690 aa11.51□□□□□ -0.57
HDAC6-203ENST00000376619 COQ4Q9Y3A0 265 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms