RNA–Protein interactions for RNA: ENST00000376061.8

PDPN-203, Transcript of podoplanin, humanhuman

TSL 1 (best) BASIC

Gene PDPN, Length 1,368 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-203ENST00000376061 PYGMP11217 842 aa10.91□□□□□ -0.66
PDPN-203ENST00000376061 NCAM1P13591 858 aa10.91□□□□□ -0.66
PDPN-203ENST00000376061 YWHAQP27348 245 aa10.91□□□□□ -0.66
PDPN-203ENST00000376061 ATXN1P54253 815 aaKnown RBP10.91□□□□□ -0.66
PDPN-203ENST00000376061 PDAP1Q13442 181 aaKnown RBP10.91□□□□□ -0.66
PDPN-203ENST00000376061 RAB30Q15771 203 aa10.91□□□□□ -0.66
PDPN-203ENST00000376061 HADHQ16836 314 aaKnown RBP10.91□□□□□ -0.66
PDPN-203ENST00000376061 SMTNL2Q2TAL5 461 aa10.91□□□□□ -0.66
PDPN-203ENST00000376061 CCDC181Q5TID7 509 aa10.91□□□□□ -0.66
PDPN-203ENST00000376061 TAC4Q86UU9 113 aa10.91□□□□□ -0.66
PDPN-203ENST00000376061 MRPL43Q8N983 215 aaKnown RBP10.91□□□□□ -0.66
PDPN-203ENST00000376061 ACTRT1Q8TDG2 376 aa10.91□□□□□ -0.66
PDPN-203ENST00000376061 FBXO32Q969P5 355 aa10.91□□□□□ -0.66
PDPN-203ENST00000376061 NCAPGQ9BPX3 1015 aa10.91□□□□□ -0.66
PDPN-203ENST00000376061 EMILIN2Q9BXX0 1053 aa10.91□□□□□ -0.66
PDPN-203ENST00000376061 NKX2-4Q9H2Z4 354 aa10.91□□□□□ -0.66
PDPN-203ENST00000376061 OSER1Q9NX31 292 aa10.91□□□□□ -0.66
PDPN-203ENST00000376061 RRN3Q9NYV6 651 aa10.91□□□□□ -0.66
PDPN-203ENST00000376061 PCSK1NQ9UHG2 260 aa10.91□□□□□ -0.66
PDPN-203ENST00000376061 FBXW11Q9UKB1 542 aa10.91□□□□□ -0.66
PDPN-203ENST00000376061 TTC7AQ9ULT0 858 aaPredicted RBP10.91□□□□□ -0.66
PDPN-203ENST00000376061 USP18Q9UMW8 372 aa10.91□□□□□ -0.66
PDPN-203ENST00000376061 PDE4DIPQ5VU43 2346 aa10.91□□□□□ -0.66
PDPN-203ENST00000376061 HSFX4A0A1B0GTS1 333 aaPredicted RBP10.9□□□□□ -0.66
PDPN-203ENST00000376061 HSFX3A0A1B0GWH4 333 aaPredicted RBP10.9□□□□□ -0.66
PDPN-203ENST00000376061 H3BNC9 293 aa10.9□□□□□ -0.66
PDPN-203ENST00000376061 M0QYT0 321 aa10.9□□□□□ -0.66
PDPN-203ENST00000376061 PRPSAP2O60256 369 aa10.9□□□□□ -0.66
PDPN-203ENST00000376061 ENDOD1O94919 500 aa10.9□□□□□ -0.66
PDPN-203ENST00000376061 IGLV3-25P01717 112 aa10.9□□□□□ -0.66
PDPN-203ENST00000376061 HMGA1P17096 107 aaKnown RBP10.9□□□□□ -0.66
PDPN-203ENST00000376061 ELF1P32519 619 aa10.9□□□□□ -0.66
PDPN-203ENST00000376061 RDXP35241 583 aaKnown RBP10.9□□□□□ -0.66
PDPN-203ENST00000376061 IRS1P35568 1242 aa10.9□□□□□ -0.66
PDPN-203ENST00000376061 ALDH1A3P47895 512 aa10.9□□□□□ -0.66
PDPN-203ENST00000376061 TWF1Q12792 350 aa10.9□□□□□ -0.66
PDPN-203ENST00000376061 TAF10Q12962 218 aa10.9□□□□□ -0.66
PDPN-203ENST00000376061 GPM6BQ13491 265 aa10.9□□□□□ -0.66
PDPN-203ENST00000376061 ATP13A4Q4VNC1 1196 aa10.9□□□□□ -0.66
PDPN-203ENST00000376061 SEL1L2Q5TEA6 688 aa10.9□□□□□ -0.66
PDPN-203ENST00000376061 MSANTD2Q6P1R3 559 aa10.9□□□□□ -0.66
PDPN-203ENST00000376061 LILRA6Q6PI73 481 aa10.9□□□□□ -0.66
PDPN-203ENST00000376061 MON1AQ86VX9 555 aa10.9□□□□□ -0.66
PDPN-203ENST00000376061 ARHGAP18Q8N392 663 aa10.9□□□□□ -0.66
PDPN-203ENST00000376061 CEP112Q8N8E3 955 aa10.9□□□□□ -0.66
PDPN-203ENST00000376061 MNS1Q8NEH6 495 aa10.9□□□□□ -0.66
PDPN-203ENST00000376061 EXD1Q8NHP7 514 aa10.9□□□□□ -0.66
PDPN-203ENST00000376061 SLC7A14Q8TBB6 771 aa10.9□□□□□ -0.66
PDPN-203ENST00000376061 ADAM32Q8TC27 787 aa10.9□□□□□ -0.66
PDPN-203ENST00000376061 DQX1Q8TE96 717 aaKnown RBP10.9□□□□□ -0.66
PDPN-203ENST00000376061 TEKT4Q8WW24 435 aa10.9□□□□□ -0.66
PDPN-203ENST00000376061 PGAP3Q96FM1 320 aaPredicted RBP10.9□□□□□ -0.66
PDPN-203ENST00000376061 SMOC2Q9H3U7 446 aa10.9□□□□□ -0.66
PDPN-203ENST00000376061 FAM204AQ9H8W3 233 aa10.9□□□□□ -0.66
PDPN-203ENST00000376061 ABCC13Q9NSE7 274 aa10.9□□□□□ -0.66
PDPN-203ENST00000376061 PIGVQ9NUD9 493 aa10.9□□□□□ -0.66
PDPN-203ENST00000376061 DDIT4Q9NX09 232 aa10.9□□□□□ -0.66
PDPN-203ENST00000376061 DDX56Q9NY93 547 aaKnown RBP10.9□□□□□ -0.66
PDPN-203ENST00000376061 RNF14Q9UBS8 474 aa10.9□□□□□ -0.66
PDPN-203ENST00000376061 MYO7AQ13402 2215 aa10.9□□□□□ -0.66
PDPN-203ENST00000376061 SYNJ2BP-COX16A0A087WUM0 186 aa10.9□□□□□ -0.67
PDPN-203ENST00000376061 LRRD1A4D1F6 860 aa10.9□□□□□ -0.67
PDPN-203ENST00000376061 C3orf70A6NLC5 250 aaPredicted RBP10.9□□□□□ -0.67
PDPN-203ENST00000376061 PI4K2BG5E9Z4 385 aa10.9□□□□□ -0.67
PDPN-203ENST00000376061 LPXNO60711 386 aa10.9□□□□□ -0.67
PDPN-203ENST00000376061 TADA3O75528 432 aa10.9□□□□□ -0.67
PDPN-203ENST00000376061 GLUD1P00367 558 aa10.9□□□□□ -0.67
PDPN-203ENST00000376061 FGGP02679 453 aa10.9□□□□□ -0.67
PDPN-203ENST00000376061 ZDHHC11BP0C7U3 371 aa10.9□□□□□ -0.67
PDPN-203ENST00000376061 SPATA31D3P0C874 917 aa10.9□□□□□ -0.67
PDPN-203ENST00000376061 CSH1P0DML2 217 aa10.9□□□□□ -0.67
PDPN-203ENST00000376061 CSH2P0DML3 217 aa10.9□□□□□ -0.67
PDPN-203ENST00000376061 RARAP10276 462 aa10.9□□□□□ -0.67
PDPN-203ENST00000376061 KLRC2P26717 231 aa10.9□□□□□ -0.67
PDPN-203ENST00000376061 BMP8BP34820 402 aa10.9□□□□□ -0.67
PDPN-203ENST00000376061 PAFAH1B1P43034 410 aa10.9□□□□□ -0.67
PDPN-203ENST00000376061 DEUP1Q05D60 604 aa10.9□□□□□ -0.67
PDPN-203ENST00000376061 NME3Q13232 169 aa10.9□□□□□ -0.67
PDPN-203ENST00000376061 PLD1Q13393 1074 aa10.9□□□□□ -0.67
PDPN-203ENST00000376061 VEPH1Q14D04 833 aa10.9□□□□□ -0.67
PDPN-203ENST00000376061 KCNT1Q5JUK3 1230 aa10.9□□□□□ -0.67
PDPN-203ENST00000376061 BTBD8Q5XKL5 378 aa10.9□□□□□ -0.67
PDPN-203ENST00000376061 PPP2R2DQ66LE6 453 aa10.9□□□□□ -0.67
PDPN-203ENST00000376061 SCYL2Q6P3W7 929 aa10.9□□□□□ -0.67
PDPN-203ENST00000376061 SPATA31D4Q6ZUB0 917 aa10.9□□□□□ -0.67
PDPN-203ENST00000376061 ANKS1BQ7Z6G8 1248 aa10.9□□□□□ -0.67
PDPN-203ENST00000376061 FAM131BQ86XD5 332 aa10.9□□□□□ -0.67
PDPN-203ENST00000376061 CCDC185Q8N715 623 aa10.9□□□□□ -0.67
PDPN-203ENST00000376061 RAPGEF5Q92565 580 aa10.9□□□□□ -0.67
PDPN-203ENST00000376061 HSPH1Q92598 858 aa10.9□□□□□ -0.67
PDPN-203ENST00000376061 TRMT2BQ96GJ1 504 aaKnown RBP10.9□□□□□ -0.67
PDPN-203ENST00000376061 RBM41Q96IZ5 413 aaKnown RBP10.9□□□□□ -0.67
PDPN-203ENST00000376061 MYRFLQ96LU7 910 aa10.9□□□□□ -0.67
PDPN-203ENST00000376061 SLITRK1Q96PX8 696 aa10.9□□□□□ -0.67
PDPN-203ENST00000376061 HERPUD2Q9BSE4 406 aa10.9□□□□□ -0.67
PDPN-203ENST00000376061 SNRNP25Q9BV90 132 aaKnown RBP10.9□□□□□ -0.67
PDPN-203ENST00000376061 CERS4Q9HA82 394 aa10.9□□□□□ -0.67
PDPN-203ENST00000376061 WDR6Q9NNW5 1121 aaKnown RBP10.9□□□□□ -0.67
PDPN-203ENST00000376061 STAU2Q9NUL3 570 aaKnown RBP eCLIP10.9□□□□□ -0.67
PDPN-203ENST00000376061 GPATCH2LQ9NWQ4 482 aa10.9□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms