RNA–Protein interactions for RNA: ENST00000375254.7

UBR4-204, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBR4, Length 15,906 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-204ENST00000375254 C4orf50Q6ZRC1 276 aa6.8□□□□□ -1.32
UBR4-204ENST00000375254 EFHBQ8N7U6 833 aa6.8□□□□□ -1.32
UBR4-204ENST00000375254 AKAP1Q92667 903 aaKnown RBP eCLIP6.8□□□□□ -1.32
UBR4-204ENST00000375254 MROH7-TTC4A0A0A0MT08 1334 aa6.8□□□□□ -1.32
UBR4-204ENST00000375254 SLC22A2O15244 555 aa6.8□□□□□ -1.32
UBR4-204ENST00000375254 NADKO95544 446 aaPredicted RBP6.8□□□□□ -1.32
UBR4-204ENST00000375254 DLATP10515 647 aaKnown RBP6.8□□□□□ -1.32
UBR4-204ENST00000375254 EIF2S3P41091 472 aaKnown RBP6.8□□□□□ -1.32
UBR4-204ENST00000375254 BST2Q10589 180 aaKnown RBP6.8□□□□□ -1.32
UBR4-204ENST00000375254 CDC16Q13042 620 aa6.8□□□□□ -1.32
UBR4-204ENST00000375254 PTK6Q13882 451 aa6.8□□□□□ -1.32
UBR4-204ENST00000375254 PLBD2Q8NHP8 589 aa6.8□□□□□ -1.32
UBR4-204ENST00000375254 GABBR2O75899 941 aa6.8□□□□□ -1.32
UBR4-204ENST00000375254 PAGE2BQ5JRK9 111 aa6.8□□□□□ -1.32
UBR4-204ENST00000375254 ZBTB8OSQ8IWT0 167 aa6.8□□□□□ -1.32
UBR4-204ENST00000375254 TGFBRAP1Q8WUH2 860 aa6.8□□□□□ -1.32
UBR4-204ENST00000375254 CLN6Q9NWW5 311 aa6.8□□□□□ -1.32
UBR4-204ENST00000375254 KCND2Q9NZV8 630 aa6.8□□□□□ -1.32
UBR4-204ENST00000375254 LINC00854A0A1B0GVQ3 168 aa6.8□□□□□ -1.32
UBR4-204ENST00000375254 ABHD2P08910 425 aa6.8□□□□□ -1.32
UBR4-204ENST00000375254 ALADP13716 330 aa6.8□□□□□ -1.32
UBR4-204ENST00000375254 EPHB2P29323 1055 aa6.8□□□□□ -1.32
UBR4-204ENST00000375254 PTENP60484 403 aa6.8□□□□□ -1.32
UBR4-204ENST00000375254 POU5F1BQ06416 359 aa6.8□□□□□ -1.32
UBR4-204ENST00000375254 CCDC81Q6ZN84 652 aa6.8□□□□□ -1.32
UBR4-204ENST00000375254 WDR97A6NE52 1622 aa6.8□□□□□ -1.32
UBR4-204ENST00000375254 MYO3BQ8WXR4 1341 aa6.8□□□□□ -1.32
UBR4-204ENST00000375254 RIPK2O43353 540 aa6.8□□□□□ -1.32
UBR4-204ENST00000375254 TFE3P19532 575 aaPredicted RBP6.8□□□□□ -1.32
UBR4-204ENST00000375254 OGNP20774 298 aaKnown RBP6.8□□□□□ -1.32
UBR4-204ENST00000375254 NMT1P30419 496 aaKnown RBP6.8□□□□□ -1.32
UBR4-204ENST00000375254 SPAG4Q9NPE6 437 aa6.8□□□□□ -1.32
UBR4-204ENST00000375254 FAM105AQ9NUU6 356 aa6.8□□□□□ -1.32
UBR4-204ENST00000375254 KLHL8Q9P2G9 620 aaPredicted RBP6.8□□□□□ -1.32
UBR4-204ENST00000375254 SERPINA1P01009 418 aa6.8□□□□□ -1.32
UBR4-204ENST00000375254 PRG2P13727 222 aa6.8□□□□□ -1.32
UBR4-204ENST00000375254 PRKCQQ04759 706 aa6.8□□□□□ -1.32
UBR4-204ENST00000375254 ITKQ08881 620 aa6.8□□□□□ -1.32
UBR4-204ENST00000375254 GPATCH4Q5T3I0 446 aaKnown RBP6.8□□□□□ -1.32
UBR4-204ENST00000375254 ATG16L2Q8NAA4 619 aa6.8□□□□□ -1.32
UBR4-204ENST00000375254 XAGE2Q96GT9 111 aa6.8□□□□□ -1.32
UBR4-204ENST00000375254 HEMGNQ9BXL5 484 aa6.8□□□□□ -1.32
UBR4-204ENST00000375254 NR3C2P08235 984 aa6.8□□□□□ -1.32
UBR4-204ENST00000375254 CLTBP09497 229 aa6.8□□□□□ -1.32
UBR4-204ENST00000375254 CD79BP40259 229 aa6.8□□□□□ -1.32
UBR4-204ENST00000375254 MMP13P45452 471 aa6.8□□□□□ -1.32
UBR4-204ENST00000375254 VMACQ2NL98 169 aa6.8□□□□□ -1.32
UBR4-204ENST00000375254 TMC4Q7Z404 712 aa6.8□□□□□ -1.32
UBR4-204ENST00000375254 SLC13A5Q86YT5 568 aaPredicted RBP6.8□□□□□ -1.32
UBR4-204ENST00000375254 PHC2Q8IXK0 858 aa6.8□□□□□ -1.32
UBR4-204ENST00000375254 CHPFQ8IZ52 775 aa6.8□□□□□ -1.32
UBR4-204ENST00000375254 TCTEX1D2Q8WW35 142 aa6.8□□□□□ -1.32
UBR4-204ENST00000375254 MAFIPQ8WZ33 124 aa6.8□□□□□ -1.32
UBR4-204ENST00000375254 TMEM109Q9BVC6 243 aa6.8□□□□□ -1.32
UBR4-204ENST00000375254 ITGA11Q9UKX5 1188 aa6.8□□□□□ -1.32
UBR4-204ENST00000375254 CHKBQ9Y259 395 aa6.8□□□□□ -1.32
UBR4-204ENST00000375254 PLD2O14939 933 aa6.8□□□□□ -1.32
UBR4-204ENST00000375254 UBDO15205 165 aa6.8□□□□□ -1.32
UBR4-204ENST00000375254 ARIH2O95376 493 aa6.8□□□□□ -1.32
UBR4-204ENST00000375254 SDC2P34741 201 aa6.8□□□□□ -1.32
UBR4-204ENST00000375254 HPCAP84074 193 aa6.8□□□□□ -1.32
UBR4-204ENST00000375254 DPY19L2Q6NUT2 758 aa6.8□□□□□ -1.32
UBR4-204ENST00000375254 DCP2Q8IU60 420 aaKnown RBP6.8□□□□□ -1.32
UBR4-204ENST00000375254 CHERPQ8IWX8 916 aaKnown RBP6.8□□□□□ -1.32
UBR4-204ENST00000375254 C4orf33Q8N1A6 199 aa6.8□□□□□ -1.32
UBR4-204ENST00000375254 ZNF333Q96JL9 665 aa6.8□□□□□ -1.32
UBR4-204ENST00000375254 DHRS1Q96LJ7 313 aa6.8□□□□□ -1.32
UBR4-204ENST00000375254 KCTD14Q9BQ13 255 aaPredicted RBP6.8□□□□□ -1.32
UBR4-204ENST00000375254 RSAD1Q9HA92 442 aa6.8□□□□□ -1.32
UBR4-204ENST00000375254 PLOD2O00469 737 aa6.79□□□□□ -1.32
UBR4-204ENST00000375254 PAEPP09466 180 aa6.79□□□□□ -1.32
UBR4-204ENST00000375254 GZMAP12544 262 aa6.79□□□□□ -1.32
UBR4-204ENST00000375254 PUS10Q3MIT2 529 aaKnown RBP6.79□□□□□ -1.32
UBR4-204ENST00000375254 IFNL3Q8IZI9 196 aa6.79□□□□□ -1.32
UBR4-204ENST00000375254 JDP2Q8WYK2 163 aa6.79□□□□□ -1.32
UBR4-204ENST00000375254 MTMR10Q9NXD2 777 aa6.79□□□□□ -1.32
UBR4-204ENST00000375254 PALD1Q9ULE6 856 aa6.79□□□□□ -1.32
UBR4-204ENST00000375254 SLC30A1Q9Y6M5 507 aa6.79□□□□□ -1.32
UBR4-204ENST00000375254 ZSCAN5CA6NGD5 496 aaPredicted RBP6.79□□□□□ -1.32
UBR4-204ENST00000375254 FBP2O00757 339 aa6.79□□□□□ -1.32
UBR4-204ENST00000375254 MAPK1P28482 360 aa6.79□□□□□ -1.32
UBR4-204ENST00000375254 ARSHQ5FYA8 562 aa6.79□□□□□ -1.32
UBR4-204ENST00000375254 L3MBTL3Q96JM7 780 aaPredicted RBP6.79□□□□□ -1.32
UBR4-204ENST00000375254 ZSCAN5AQ9BUG6 496 aa6.79□□□□□ -1.32
UBR4-204ENST00000375254 ZNF112Q9UJU3 913 aa6.79□□□□□ -1.32
UBR4-204ENST00000375254 ZNF701M0R085 212 aaPredicted RBP6.79□□□□□ -1.32
UBR4-204ENST00000375254 UGT2B4P06133 528 aa6.79□□□□□ -1.32
UBR4-204ENST00000375254 TCN1P20061 433 aaPredicted RBP6.79□□□□□ -1.32
UBR4-204ENST00000375254 ITGA8P53708 1063 aa6.79□□□□□ -1.32
UBR4-204ENST00000375254 PLEKHG4Q58EX7 1191 aa6.79□□□□□ -1.32
UBR4-204ENST00000375254 NSMCE2Q96MF7 247 aa6.79□□□□□ -1.32
UBR4-204ENST00000375254 PCDHB16Q9NRJ7 776 aa6.79□□□□□ -1.32
UBR4-204ENST00000375254 SLAIN2Q9P270 581 aa6.79□□□□□ -1.32
UBR4-204ENST00000375254 KLRF2D3W0D1 207 aa6.79□□□□□ -1.32
UBR4-204ENST00000375254 CCNA1P78396 465 aa6.79□□□□□ -1.32
UBR4-204ENST00000375254 IL5RAQ01344 420 aa6.79□□□□□ -1.32
UBR4-204ENST00000375254 AKAP4Q5JQC9 854 aa6.79□□□□□ -1.32
UBR4-204ENST00000375254 LINC00523Q86TU6 105 aa6.79□□□□□ -1.32
UBR4-204ENST00000375254 RTKNQ9BST9 563 aa6.79□□□□□ -1.32
UBR4-204ENST00000375254 IL20Q9NYY1 176 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 79.3 ms