RNA–Protein interactions for RNA: ENST00000375224.1

UBR4-202, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 3,475 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-202ENST00000375224 PIK3R2O00459 728 aa8.53□□□□□ -1.04
UBR4-202ENST00000375224 GRAP2O75791 330 aa8.53□□□□□ -1.04
UBR4-202ENST00000375224 SMNDC1O75940 238 aaKnown RBP eCLIP8.53□□□□□ -1.048e-14■■■■□ 19.7
UBR4-202ENST00000375224 CD48P09326 243 aa8.53□□□□□ -1.04
UBR4-202ENST00000375224 PDGFRBP09619 1106 aa8.53□□□□□ -1.04
UBR4-202ENST00000375224 ATP2A2P16615 1042 aaKnown RBP8.53□□□□□ -1.04
UBR4-202ENST00000375224 ADORA2BP29275 332 aa8.53□□□□□ -1.04
UBR4-202ENST00000375224 ATP11AP98196 1134 aa8.53□□□□□ -1.04
UBR4-202ENST00000375224 RASA2Q15283 850 aa8.53□□□□□ -1.04
UBR4-202ENST00000375224 SAPCD2Q86UD0 394 aa8.53□□□□□ -1.04
UBR4-202ENST00000375224 FAM228AQ86W67 206 aa8.53□□□□□ -1.04
UBR4-202ENST00000375224 SCUBE3Q8IX30 993 aa8.53□□□□□ -1.04
UBR4-202ENST00000375224 GLIS1Q8NBF1 620 aa8.53□□□□□ -1.04
UBR4-202ENST00000375224 SMG8Q8ND04 991 aaKnown RBP8.53□□□□□ -1.04
UBR4-202ENST00000375224 UBN1Q9NPG3 1134 aa8.53□□□□□ -1.04
UBR4-202ENST00000375224 SENP1Q9P0U3 644 aa8.53□□□□□ -1.04
UBR4-202ENST00000375224 EXOC1LA0A1B0GW35 172 aa8.53□□□□□ -1.04
UBR4-202ENST00000375224 XPO1O14980 1071 aaKnown RBP8.53□□□□□ -1.04
UBR4-202ENST00000375224 KRT38O76015 456 aa8.53□□□□□ -1.04
UBR4-202ENST00000375224 RPL22P35268 128 aaKnown RBP8.53□□□□□ -1.04
UBR4-202ENST00000375224 FCGRTP55899 365 aa8.53□□□□□ -1.04
UBR4-202ENST00000375224 LILRA4P59901 499 aa8.53□□□□□ -1.04
UBR4-202ENST00000375224 CCDC142Q17RM4 750 aa8.53□□□□□ -1.04
UBR4-202ENST00000375224 GNASQ5JWF2 1037 aa8.53□□□□□ -1.04
UBR4-202ENST00000375224 GKAP1Q5VSY0 366 aaPredicted RBP8.53□□□□□ -1.04
UBR4-202ENST00000375224 CYP4F22Q6NT55 531 aa8.53□□□□□ -1.04
UBR4-202ENST00000375224 YTHDF3Q7Z739 585 aaKnown RBP8.53□□□□□ -1.04
UBR4-202ENST00000375224 PRUNE1Q86TP1 453 aa8.53□□□□□ -1.04
UBR4-202ENST00000375224 PDIK1LQ8N165 341 aa8.53□□□□□ -1.04
UBR4-202ENST00000375224 GALNT15Q8N3T1 639 aa8.53□□□□□ -1.04
UBR4-202ENST00000375224 MDM1Q8TC05 714 aa8.53□□□□□ -1.04
UBR4-202ENST00000375224 HNRNPABQ99729 332 aaKnown RBP8.53□□□□□ -1.04
UBR4-202ENST00000375224 RNF39Q9H2S5 420 aa8.53□□□□□ -1.04
UBR4-202ENST00000375224 PAK5Q9P286 719 aa8.53□□□□□ -1.04
UBR4-202ENST00000375224 FETUBQ9UGM5 382 aa8.53□□□□□ -1.04
UBR4-202ENST00000375224 GTF2IRD1Q9UHL9 959 aa8.53□□□□□ -1.04
UBR4-202ENST00000375224 SLC24A2Q9UI40 661 aa8.53□□□□□ -1.04
UBR4-202ENST00000375224 H7C0C1 242 aa8.53□□□□□ -1.04
UBR4-202ENST00000375224 ATP5OP48047 213 aa8.53□□□□□ -1.04
UBR4-202ENST00000375224 POLE2P56282 527 aa8.53□□□□□ -1.04
UBR4-202ENST00000375224 BCAR1P56945 870 aa8.53□□□□□ -1.04
UBR4-202ENST00000375224 PDIA2Q13087 525 aaKnown RBP8.53□□□□□ -1.04
UBR4-202ENST00000375224 TAF5Q15542 800 aa8.53□□□□□ -1.04
UBR4-202ENST00000375224 MAP7D1Q3KQU3 841 aa8.53□□□□□ -1.04
UBR4-202ENST00000375224 ANKRD20A8PQ5CZ79 823 aa8.53□□□□□ -1.04
UBR4-202ENST00000375224 UBAP2Q5T6F2 1119 aaKnown RBP8.53□□□□□ -1.04
UBR4-202ENST00000375224 TRNP1Q6NT89 227 aa8.53□□□□□ -1.04
UBR4-202ENST00000375224 CYP4V2Q6ZWL3 525 aaPredicted RBP8.53□□□□□ -1.04
UBR4-202ENST00000375224 STRADAQ7RTN6 431 aa8.53□□□□□ -1.04
UBR4-202ENST00000375224 TMEM86AQ8N2M4 240 aa8.53□□□□□ -1.04
UBR4-202ENST00000375224 NAT8LQ8N9F0 302 aa8.53□□□□□ -1.04
UBR4-202ENST00000375224 ATP11CQ8NB49 1132 aa8.53□□□□□ -1.04
UBR4-202ENST00000375224 B3GALNT2Q8NCR0 500 aa8.53□□□□□ -1.04
UBR4-202ENST00000375224 CENPIQ92674 756 aaPredicted RBP8.53□□□□□ -1.04
UBR4-202ENST00000375224 KHSRPQ92945 711 aaKnown RBP eCLIP8.53□□□□□ -1.042e-11■■□□□ 11.5
UBR4-202ENST00000375224 PWWP2AQ96N64 755 aa8.53□□□□□ -1.04
UBR4-202ENST00000375224 UPF3AQ9H1J1 476 aaKnown RBP8.53□□□□□ -1.04
UBR4-202ENST00000375224 DPEP3Q9H4B8 488 aa8.53□□□□□ -1.04
UBR4-202ENST00000375224 VPS37BQ9H9H4 285 aa8.53□□□□□ -1.04
UBR4-202ENST00000375224 PCDH18Q9HCL0 1135 aa8.53□□□□□ -1.04
UBR4-202ENST00000375224 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP8.53□□□□□ -1.04
UBR4-202ENST00000375224 SAE1Q9UBE0 346 aaPredicted RBP8.53□□□□□ -1.04
UBR4-202ENST00000375224 NAALADL1Q9UQQ1 740 aa8.53□□□□□ -1.04
UBR4-202ENST00000375224 NME7Q9Y5B8 376 aa8.53□□□□□ -1.04
UBR4-202ENST00000375224 CDY2AQ9Y6F7 541 aa8.53□□□□□ -1.04
UBR4-202ENST00000375224 CYB561D2O14569 222 aa8.52□□□□□ -1.05
UBR4-202ENST00000375224 FGFR1P11362 822 aa8.52□□□□□ -1.05
UBR4-202ENST00000375224 CCDC130P13994 396 aa8.52□□□□□ -1.05
UBR4-202ENST00000375224 SH3PXD2AQ5TCZ1 1133 aa8.52□□□□□ -1.05
UBR4-202ENST00000375224 SLC9A4Q6AI14 798 aa8.52□□□□□ -1.05
UBR4-202ENST00000375224 ARHGEF18Q6ZSZ5 1173 aa8.52□□□□□ -1.05
UBR4-202ENST00000375224 PSTKQ8IV42 348 aaKnown RBP8.52□□□□□ -1.05
UBR4-202ENST00000375224 UNC45BQ8IWX7 931 aa8.52□□□□□ -1.05
UBR4-202ENST00000375224 IQCF2Q8IXL9 164 aa8.52□□□□□ -1.05
UBR4-202ENST00000375224 ZBED8Q8IZ13 594 aa8.52□□□□□ -1.05
UBR4-202ENST00000375224 CACNA2D3Q8IZS8 1091 aa8.52□□□□□ -1.05
UBR4-202ENST00000375224 FUKQ8N0W3 1084 aa8.52□□□□□ -1.05
UBR4-202ENST00000375224 SLC2A14Q8TDB8 520 aa8.52□□□□□ -1.05
UBR4-202ENST00000375224 PYROXD1Q8WU10 500 aa8.52□□□□□ -1.05
UBR4-202ENST00000375224 PPP1R13LQ8WUF5 828 aa8.52□□□□□ -1.05
UBR4-202ENST00000375224 ATXN2LQ8WWM7 1075 aaKnown RBP8.52□□□□□ -1.05
UBR4-202ENST00000375224 CPT1BQ92523 772 aa8.52□□□□□ -1.05
UBR4-202ENST00000375224 PIWIL1Q96J94 861 aaKnown RBP8.52□□□□□ -1.05
UBR4-202ENST00000375224 PPP1R10Q96QC0 940 aaKnown RBP8.52□□□□□ -1.05
UBR4-202ENST00000375224 SNRNP25Q9BV90 132 aaKnown RBP8.52□□□□□ -1.05
UBR4-202ENST00000375224 DUSP16Q9BY84 665 aa8.52□□□□□ -1.05
UBR4-202ENST00000375224 NKIRAS1Q9NYS0 192 aa8.52□□□□□ -1.05
UBR4-202ENST00000375224 BCLAF3A2AJT9 711 aaKnown RBP8.52□□□□□ -1.05
UBR4-202ENST00000375224 GPR182O15218 404 aa8.52□□□□□ -1.05
UBR4-202ENST00000375224 SPTLC1O15269 473 aa8.52□□□□□ -1.05
UBR4-202ENST00000375224 LCP1P13796 627 aa8.52□□□□□ -1.05
UBR4-202ENST00000375224 LMO2P25791 158 aa8.52□□□□□ -1.05
UBR4-202ENST00000375224 LHX1P48742 406 aa8.52□□□□□ -1.05
UBR4-202ENST00000375224 NR2C2P49116 596 aa8.52□□□□□ -1.05
UBR4-202ENST00000375224 NKX3-2P78367 333 aa8.52□□□□□ -1.05
UBR4-202ENST00000375224 RNASELQ05823 741 aaKnown RBP8.52□□□□□ -1.05
UBR4-202ENST00000375224 CRHR2Q13324 411 aa8.52□□□□□ -1.05
UBR4-202ENST00000375224 CDKL3Q8IVW4 592 aaPredicted RBP8.52□□□□□ -1.05
UBR4-202ENST00000375224 PLD5Q8N7P1 536 aa8.52□□□□□ -1.05
UBR4-202ENST00000375224 FAM71DQ8N9W8 422 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms