RNA–Protein interactions for RNA: ENST00000374732.7

USP48-203, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2 BASIC

Gene USP48, Length 3,037 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-203ENST00000374732 BFSP1Q12934 665 aa8.22□□□□□ -1.09
USP48-203ENST00000374732 ADAM9Q13443 819 aa8.22□□□□□ -1.09
USP48-203ENST00000374732 PIK3AP1Q6ZUJ8 805 aa8.22□□□□□ -1.09
USP48-203ENST00000374732 LRP10Q7Z4F1 713 aa8.22□□□□□ -1.09
USP48-203ENST00000374732 C12orf50Q8NA57 414 aaPredicted RBP8.22□□□□□ -1.09
USP48-203ENST00000374732 OR8K3Q8NH51 312 aa8.22□□□□□ -1.09
USP48-203ENST00000374732 FAM216AQ8WUB2 273 aa8.22□□□□□ -1.09
USP48-203ENST00000374732 METTL22Q9BUU2 404 aaPredicted RBP8.22□□□□□ -1.09
USP48-203ENST00000374732 FUT8Q9BYC5 575 aa8.22□□□□□ -1.09
USP48-203ENST00000374732 TRIM45Q9H8W5 580 aaPredicted RBP8.22□□□□□ -1.09
USP48-203ENST00000374732 DNAJB4Q9UDY4 337 aa8.22□□□□□ -1.09
USP48-203ENST00000374732 SNX14Q9Y5W7 946 aa8.22□□□□□ -1.09
USP48-203ENST00000374732 UBR2Q8IWV8 1755 aa8.22□□□□□ -1.09
USP48-203ENST00000374732 A6NNZ2 444 aa8.22□□□□□ -1.09
USP48-203ENST00000374732 DDX39AO00148 427 aaKnown RBP8.22□□□□□ -1.09
USP48-203ENST00000374732 FMO6PO60774 539 aa8.22□□□□□ -1.09
USP48-203ENST00000374732 LMNAP02545 664 aaKnown RBP8.22□□□□□ -1.09
USP48-203ENST00000374732 NFICP08651 508 aa8.22□□□□□ -1.09
USP48-203ENST00000374732 PTPN2P17706 415 aa8.22□□□□□ -1.09
USP48-203ENST00000374732 M6PRP20645 277 aa8.22□□□□□ -1.09
USP48-203ENST00000374732 PDIA3P30101 505 aaKnown RBP8.22□□□□□ -1.09
USP48-203ENST00000374732 SLC1A1P43005 524 aa8.22□□□□□ -1.09
USP48-203ENST00000374732 GATMP50440 423 aa8.22□□□□□ -1.09
USP48-203ENST00000374732 OGFOD3Q6PK18 319 aa8.22□□□□□ -1.09
USP48-203ENST00000374732 TMC5Q6UXY8 1006 aa8.22□□□□□ -1.09
USP48-203ENST00000374732 LRRC6Q86X45 466 aa8.22□□□□□ -1.09
USP48-203ENST00000374732 TICAM1Q8IUC6 712 aa8.22□□□□□ -1.09
USP48-203ENST00000374732 BANPQ8N9N5 519 aa8.22□□□□□ -1.09
USP48-203ENST00000374732 ZNF680Q8NEM1 530 aa8.22□□□□□ -1.09
USP48-203ENST00000374732 SMG7Q92540 1137 aaKnown RBP8.22□□□□□ -1.09
USP48-203ENST00000374732 SGCZQ96LD1 299 aa8.22□□□□□ -1.09
USP48-203ENST00000374732 TM9SF2Q99805 663 aa8.22□□□□□ -1.09
USP48-203ENST00000374732 SGIP1Q9BQI5 828 aa8.22□□□□□ -1.09
USP48-203ENST00000374732 WNT8AQ9H1J5 351 aa8.22□□□□□ -1.09
USP48-203ENST00000374732 AZI2Q9H6S1 392 aa8.22□□□□□ -1.09
USP48-203ENST00000374732 IL1RAPL2Q9NP60 686 aa8.22□□□□□ -1.09
USP48-203ENST00000374732 DDX28Q9NUL7 540 aaKnown RBP8.22□□□□□ -1.09
USP48-203ENST00000374732 COX16Q9P0S2 106 aa8.22□□□□□ -1.09
USP48-203ENST00000374732 DERAQ9Y315 318 aa8.22□□□□□ -1.09
USP48-203ENST00000374732 A0A0B4J269 797 aa8.21□□□□□ -1.09
USP48-203ENST00000374732 KANSL1LA0AUZ9 987 aa8.21□□□□□ -1.09
USP48-203ENST00000374732 PITPNM1O00562 1244 aa8.21□□□□□ -1.09
USP48-203ENST00000374732 FBP2O00757 339 aa8.21□□□□□ -1.09
USP48-203ENST00000374732 ZBED1O96006 694 aa8.21□□□□□ -1.09
USP48-203ENST00000374732 ARHGAP25P42331 645 aa8.21□□□□□ -1.09
USP48-203ENST00000374732 ACTR1AP61163 376 aa8.21□□□□□ -1.09
USP48-203ENST00000374732 PARP6Q2NL67 630 aa8.21□□□□□ -1.09
USP48-203ENST00000374732 ANKRD20A4Q4UJ75 823 aa8.21□□□□□ -1.09
USP48-203ENST00000374732 TMEM67Q5HYA8 995 aa8.21□□□□□ -1.09
USP48-203ENST00000374732 ANKRD20A1Q5TYW2 823 aa8.21□□□□□ -1.09
USP48-203ENST00000374732 SLFN13Q68D06 897 aa8.21□□□□□ -1.09
USP48-203ENST00000374732 ANO5Q75V66 913 aa8.21□□□□□ -1.09
USP48-203ENST00000374732 R3HCC1LQ7Z5L2 792 aaKnown RBP8.21□□□□□ -1.09
USP48-203ENST00000374732 NLRP8Q86W28 1048 aa8.21□□□□□ -1.09
USP48-203ENST00000374732 MPP5Q8N3R9 675 aa8.21□□□□□ -1.09
USP48-203ENST00000374732 C11orf24Q96F05 449 aaPredicted RBP8.21□□□□□ -1.09
USP48-203ENST00000374732 MYD88Q99836 296 aa8.21□□□□□ -1.09
USP48-203ENST00000374732 ECHDC1Q9NTX5 307 aa8.21□□□□□ -1.09
USP48-203ENST00000374732 BTG4Q9NY30 223 aa8.21□□□□□ -1.09
USP48-203ENST00000374732 ADD3Q9UEY8 706 aaKnown RBP8.21□□□□□ -1.09
USP48-203ENST00000374732 TMEM114B3SHH9 223 aa8.21□□□□□ -1.1
USP48-203ENST00000374732 HSBP1L1C9JCN9 74 aa8.21□□□□□ -1.1
USP48-203ENST00000374732 BTBD19C9JJ37 291 aa8.21□□□□□ -1.1
USP48-203ENST00000374732 PRPSAP2O60256 369 aa8.21□□□□□ -1.1
USP48-203ENST00000374732 ANXA1P04083 346 aa8.21□□□□□ -1.1
USP48-203ENST00000374732 HLA-FP30511 346 aa8.21□□□□□ -1.1
USP48-203ENST00000374732 CASP5P51878 434 aa8.21□□□□□ -1.1
USP48-203ENST00000374732 XRCC4Q13426 336 aa8.21□□□□□ -1.1
USP48-203ENST00000374732 SURF1Q15526 300 aa8.21□□□□□ -1.1
USP48-203ENST00000374732 TCEA2Q15560 299 aa8.21□□□□□ -1.1
USP48-203ENST00000374732 PTPN21Q16825 1174 aa8.21□□□□□ -1.1
USP48-203ENST00000374732 SMU1Q2TAY7 513 aa8.21□□□□□ -1.1
USP48-203ENST00000374732 MANEAQ5SRI9 462 aa8.21□□□□□ -1.1
USP48-203ENST00000374732 ADGRG2Q8IZP9 1017 aa8.21□□□□□ -1.1
USP48-203ENST00000374732 LZTR1Q8N653 840 aa8.21□□□□□ -1.1
USP48-203ENST00000374732 FSIP1Q8NA03 581 aa8.21□□□□□ -1.1
USP48-203ENST00000374732 CNBD1Q8NA66 436 aa8.21□□□□□ -1.1
USP48-203ENST00000374732 ADAMTS16Q8TE57 1224 aa8.21□□□□□ -1.1
USP48-203ENST00000374732 EDC3Q96F86 508 aaKnown RBP8.21□□□□□ -1.1
USP48-203ENST00000374732 KAZALD1Q96I82 304 aa8.21□□□□□ -1.1
USP48-203ENST00000374732 RIPOR3Q96MK2 946 aa8.21□□□□□ -1.1
USP48-203ENST00000374732 TUBGCP5Q96RT8 1024 aa8.21□□□□□ -1.1
USP48-203ENST00000374732 TBCCD1Q9NVR7 557 aa8.21□□□□□ -1.1
USP48-203ENST00000374732 WWOXQ9NZC7 414 aa8.21□□□□□ -1.1
USP48-203ENST00000374732 SMG5Q9UPR3 1016 aaKnown RBP8.21□□□□□ -1.1
USP48-203ENST00000374732 SLC22A14Q9Y267 594 aa8.21□□□□□ -1.1
USP48-203ENST00000374732 A0A1W2PPL8 197 aa8.21□□□□□ -1.1
USP48-203ENST00000374732 NEURL1BA8MQ27 555 aa8.21□□□□□ -1.1
USP48-203ENST00000374732 B8ZZF3 427 aa8.21□□□□□ -1.1
USP48-203ENST00000374732 ATP6V1G2-DDX39BF2Z307 99 aa8.21□□□□□ -1.1
USP48-203ENST00000374732 ADAM11O75078 769 aa8.21□□□□□ -1.1
USP48-203ENST00000374732 PAPLNO95428 1278 aa8.21□□□□□ -1.1
USP48-203ENST00000374732 KRT75O95678 551 aa8.21□□□□□ -1.1
USP48-203ENST00000374732 PROCP04070 461 aa8.21□□□□□ -1.1
USP48-203ENST00000374732 IGKV5-2P06315 115 aa8.21□□□□□ -1.1
USP48-203ENST00000374732 NR3C2P08235 984 aa8.21□□□□□ -1.1
USP48-203ENST00000374732 MYCLP12524 364 aaPredicted RBP8.21□□□□□ -1.1
USP48-203ENST00000374732 CKMT1AP12532 417 aa8.21□□□□□ -1.1
USP48-203ENST00000374732 IREB2P48200 963 aaKnown RBP8.21□□□□□ -1.1
USP48-203ENST00000374732 NEK4P51957 841 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms