RNA–Protein interactions for RNA: ENST00000374481.7

CD28-202, Transcript of CD28 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD28, Length 4,526 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD28-202ENST00000374481 SERPINB13Q9UIV8 391 aa10.56□□□□□ -0.72
CD28-202ENST00000374481 TGDSO95455 350 aa10.56□□□□□ -0.72
CD28-202ENST00000374481 FCGR1AP12314 374 aa10.56□□□□□ -0.72
CD28-202ENST00000374481 STAT3P40763 770 aa10.56□□□□□ -0.72
CD28-202ENST00000374481 NAMPTP43490 491 aa10.56□□□□□ -0.72
CD28-202ENST00000374481 CASP4P49662 377 aa10.56□□□□□ -0.72
CD28-202ENST00000374481 BCAR1P56945 870 aa10.56□□□□□ -0.72
CD28-202ENST00000374481 VAC14Q08AM6 782 aa10.56□□□□□ -0.72
CD28-202ENST00000374481 TRAF3Q13114 568 aa10.56□□□□□ -0.72
CD28-202ENST00000374481 MYLK3Q32MK0 819 aa10.56□□□□□ -0.72
CD28-202ENST00000374481 PPP2R2DQ66LE6 453 aa10.56□□□□□ -0.72
CD28-202ENST00000374481 SLCO6A1Q86UG4 719 aa10.56□□□□□ -0.72
CD28-202ENST00000374481 BPIFB6Q8NFQ5 453 aa10.56□□□□□ -0.72
CD28-202ENST00000374481 BEST2Q8NFU1 509 aa10.56□□□□□ -0.72
CD28-202ENST00000374481 STARD8Q92502 1023 aa10.56□□□□□ -0.72
CD28-202ENST00000374481 PROX1Q92786 737 aa10.56□□□□□ -0.72
CD28-202ENST00000374481 ENTPD7Q9NQZ7 604 aa10.56□□□□□ -0.72
CD28-202ENST00000374481 TMEM59LQ9UK28 342 aa10.56□□□□□ -0.72
CD28-202ENST00000374481 TMEM98Q9Y2Y6 226 aa10.56□□□□□ -0.72
CD28-202ENST00000374481 TSPAN4O14817 238 aa10.56□□□□□ -0.72
CD28-202ENST00000374481 ACAT1P24752 427 aaKnown RBP10.56□□□□□ -0.72
CD28-202ENST00000374481 SEPHS1P49903 392 aa10.56□□□□□ -0.72
CD28-202ENST00000374481 SESN2P58004 480 aaPredicted RBP10.56□□□□□ -0.72
CD28-202ENST00000374481 RPL26P61254 145 aaKnown RBP10.56□□□□□ -0.72
CD28-202ENST00000374481 SPDYAQ5MJ70 313 aa10.56□□□□□ -0.72
CD28-202ENST00000374481 TRIM72Q6ZMU5 477 aa10.56□□□□□ -0.72
CD28-202ENST00000374481 BBS5Q8N3I7 341 aa10.56□□□□□ -0.72
CD28-202ENST00000374481 FAM71DQ8N9W8 422 aa10.56□□□□□ -0.72
CD28-202ENST00000374481 PDPRQ8NCN5 879 aa10.56□□□□□ -0.72
CD28-202ENST00000374481 MTERF3Q96E29 417 aa10.56□□□□□ -0.72
CD28-202ENST00000374481 REEP2Q9BRK0 252 aa10.56□□□□□ -0.72
CD28-202ENST00000374481 HSPBP1Q9NZL4 362 aa10.56□□□□□ -0.72
CD28-202ENST00000374481 DGKBQ9Y6T7 804 aa10.56□□□□□ -0.72
CD28-202ENST00000374481 IFT172Q9UG01 1749 aa10.55□□□□□ -0.72
CD28-202ENST00000374481 ZNF335Q9H4Z2 1342 aaPredicted RBP10.55□□□□□ -0.72
CD28-202ENST00000374481 ILVBLA1L0T0 632 aa10.55□□□□□ -0.72
CD28-202ENST00000374481 CYP27B1O15528 508 aa10.55□□□□□ -0.72
CD28-202ENST00000374481 AKAP3O75969 853 aa10.55□□□□□ -0.72
CD28-202ENST00000374481 EPN2O95208 641 aa10.55□□□□□ -0.72
CD28-202ENST00000374481 NR4A1P22736 598 aa10.55□□□□□ -0.72
CD28-202ENST00000374481 FOXO4P98177 505 aa10.55□□□□□ -0.72
CD28-202ENST00000374481 DEPDC1Q5TB30 811 aa10.55□□□□□ -0.72
CD28-202ENST00000374481 LRRC55Q6ZSA7 311 aa10.55□□□□□ -0.72
CD28-202ENST00000374481 CCDC149Q6ZUS6 474 aa10.55□□□□□ -0.72
CD28-202ENST00000374481 PANX3Q96QZ0 392 aa10.55□□□□□ -0.72
CD28-202ENST00000374481 APOL4Q9BPW4 351 aa10.55□□□□□ -0.72
CD28-202ENST00000374481 KIF17Q9P2E2 1029 aa10.55□□□□□ -0.72
CD28-202ENST00000374481 POMPQ9Y244 141 aa10.55□□□□□ -0.72
CD28-202ENST00000374481 ALKQ9UM73 1620 aa10.55□□□□□ -0.72
CD28-202ENST00000374481 F5H423 210 aaPredicted RBP10.55□□□□□ -0.72
CD28-202ENST00000374481 KCNN4O15554 427 aa10.55□□□□□ -0.72
CD28-202ENST00000374481 FARP2O94887 1054 aaPredicted RBP10.55□□□□□ -0.72
CD28-202ENST00000374481 LRPAP1P30533 357 aa10.55□□□□□ -0.72
CD28-202ENST00000374481 SOX6P35712 828 aa10.55□□□□□ -0.72
CD28-202ENST00000374481 ETFBP38117 255 aa10.55□□□□□ -0.72
CD28-202ENST00000374481 ZNF394Q53GI3 561 aa10.55□□□□□ -0.72
CD28-202ENST00000374481 PTAR1Q7Z6K3 402 aaPredicted RBP10.55□□□□□ -0.72
CD28-202ENST00000374481 LUZP2Q86TE4 346 aa10.55□□□□□ -0.72
CD28-202ENST00000374481 DDIASQ8IXT1 998 aa10.55□□□□□ -0.72
CD28-202ENST00000374481 SNX31Q8N9S9 440 aa10.55□□□□□ -0.72
CD28-202ENST00000374481 LRRC20Q8TCA0 184 aa10.55□□□□□ -0.72
CD28-202ENST00000374481 CEP295NLQ96MC4 621 aa10.55□□□□□ -0.72
CD28-202ENST00000374481 TMEM47Q9BQJ4 181 aa10.55□□□□□ -0.72
CD28-202ENST00000374481 TBC1D14Q9P2M4 693 aa10.55□□□□□ -0.72
CD28-202ENST00000374481 SPATA31A6Q5VVP1 1343 aa10.55□□□□□ -0.72
CD28-202ENST00000374481 CYP2D6P10635 497 aa10.55□□□□□ -0.72
CD28-202ENST00000374481 GNA15P30679 374 aa10.55□□□□□ -0.72
CD28-202ENST00000374481 GNG2P59768 71 aa10.55□□□□□ -0.72
CD28-202ENST00000374481 ALCAMQ13740 583 aa10.55□□□□□ -0.72
CD28-202ENST00000374481 SNX17Q15036 470 aa10.55□□□□□ -0.72
CD28-202ENST00000374481 CDO1Q16878 200 aa10.55□□□□□ -0.72
CD28-202ENST00000374481 IRF2BP2Q7Z5L9 587 aa10.55□□□□□ -0.72
CD28-202ENST00000374481 GAB3Q8WWW8 586 aa10.55□□□□□ -0.72
CD28-202ENST00000374481 B3GALT6Q96L58 329 aa10.55□□□□□ -0.72
CD28-202ENST00000374481 SLC4A5Q9BY07 1137 aa10.55□□□□□ -0.72
CD28-202ENST00000374481 DCDC2Q9UHG0 476 aa10.55□□□□□ -0.72
CD28-202ENST00000374481 PRPF19Q9UMS4 504 aaKnown RBP10.55□□□□□ -0.72
CD28-202ENST00000374481 PMF1-BGLAPU3KQ54 211 aa10.55□□□□□ -0.72
CD28-202ENST00000374481 MYCLP1P12525 358 aaPredicted RBP10.54□□□□□ -0.72
CD28-202ENST00000374481 ITIH1P19827 911 aa10.54□□□□□ -0.72
CD28-202ENST00000374481 ELK3P41970 407 aa10.54□□□□□ -0.72
CD28-202ENST00000374481 MOGQ16653 247 aa10.54□□□□□ -0.72
CD28-202ENST00000374481 EPC2Q52LR7 807 aa10.54□□□□□ -0.72
CD28-202ENST00000374481 ZNF804AQ7Z570 1209 aa10.54□□□□□ -0.72
CD28-202ENST00000374481 P3H2Q8IVL5 708 aa10.54□□□□□ -0.72
CD28-202ENST00000374481 ELMOD2Q8IZ81 293 aa10.54□□□□□ -0.72
CD28-202ENST00000374481 SAMD3Q8N6K7 520 aa10.54□□□□□ -0.72
CD28-202ENST00000374481 MINDY2Q8NBR6 621 aa10.54□□□□□ -0.72
CD28-202ENST00000374481 TEKT3Q9BXF9 490 aa10.54□□□□□ -0.72
CD28-202ENST00000374481 TASP1Q9H6P5 420 aa10.54□□□□□ -0.72
CD28-202ENST00000374481 NGRNQ9NPE2 291 aaKnown RBP10.54□□□□□ -0.72
CD28-202ENST00000374481 FBXO28Q9NVF7 368 aa10.54□□□□□ -0.72
CD28-202ENST00000374481 NSMCE4AQ9NXX6 385 aa10.54□□□□□ -0.72
CD28-202ENST00000374481 VPS51Q9UID3 782 aa10.54□□□□□ -0.72
CD28-202ENST00000374481 PLA2G4CQ9UP65 541 aa10.54□□□□□ -0.72
CD28-202ENST00000374481 COL15A1P39059 1388 aa10.54□□□□□ -0.72
CD28-202ENST00000374481 TRAFD1O14545 582 aaPredicted RBP10.54□□□□□ -0.72
CD28-202ENST00000374481 SGPL1O95470 568 aa10.54□□□□□ -0.72
CD28-202ENST00000374481 SSTR3P32745 418 aaPredicted RBP10.54□□□□□ -0.72
CD28-202ENST00000374481 FXR2P51116 673 aaKnown RBP eCLIP10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms