RNA–Protein interactions for RNA: ENST00000372748.7

COL9A2-202, Transcript of collagen type IX alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL9A2, Length 2,862 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-202ENST00000372748 RAB6CQ53S08 254 aa15.35■□□□□ 0.05
COL9A2-202ENST00000372748 PPP1R2P3Q6NXS1 205 aa15.35■□□□□ 0.05
COL9A2-202ENST00000372748 PPP1R14CQ8TAE6 165 aa15.35■□□□□ 0.05
COL9A2-202ENST00000372748 NCSTNQ92542 709 aa15.35■□□□□ 0.05
COL9A2-202ENST00000372748 RAB6CQ9H0N0 254 aa15.35■□□□□ 0.05
COL9A2-202ENST00000372748 H7C0C1 242 aa15.34■□□□□ 0.05
COL9A2-202ENST00000372748 LSM8O95777 96 aaKnown RBP15.34■□□□□ 0.05
COL9A2-202ENST00000372748 PROCP04070 461 aa15.34■□□□□ 0.05
COL9A2-202ENST00000372748 SERPINB6P35237 376 aa15.34■□□□□ 0.05
COL9A2-202ENST00000372748 ATP5OP48047 213 aa15.34■□□□□ 0.05
COL9A2-202ENST00000372748 KCNJ11Q14654 390 aa15.34■□□□□ 0.05
COL9A2-202ENST00000372748 SMAD1Q15797 465 aaKnown RBP15.34■□□□□ 0.05
COL9A2-202ENST00000372748 TCHHL1Q5QJ38 904 aaPredicted RBP15.34■□□□□ 0.05
COL9A2-202ENST00000372748 TRMT10BQ6PF06 316 aaKnown RBP15.34■□□□□ 0.05
COL9A2-202ENST00000372748 GDPD5Q8WTR4 605 aa15.34■□□□□ 0.05
COL9A2-202ENST00000372748 ACAD9Q9H845 621 aa15.34■□□□□ 0.05
COL9A2-202ENST00000372748 PLAC1Q9HBJ0 212 aa15.34■□□□□ 0.05
COL9A2-202ENST00000372748 GPAMQ9HCL2 828 aa15.34■□□□□ 0.05
COL9A2-202ENST00000372748 LOC100653049A0A140TA62 436 aa15.34■□□□□ 0.05
COL9A2-202ENST00000372748 ITM2AO43736 263 aa15.34■□□□□ 0.05
COL9A2-202ENST00000372748 FKBP6O75344 327 aa15.34■□□□□ 0.05
COL9A2-202ENST00000372748 KRT34O76011 436 aa15.34■□□□□ 0.05
COL9A2-202ENST00000372748 APRTP07741 180 aa15.34■□□□□ 0.05
COL9A2-202ENST00000372748 MIPP30301 263 aa15.34■□□□□ 0.05
COL9A2-202ENST00000372748 STX3Q13277 289 aa15.34■□□□□ 0.05
COL9A2-202ENST00000372748 TRIP10Q15642 601 aa15.34■□□□□ 0.05
COL9A2-202ENST00000372748 MMEL1Q495T6 779 aa15.34■□□□□ 0.05
COL9A2-202ENST00000372748 SH3PXD2AQ5TCZ1 1133 aa15.34■□□□□ 0.05
COL9A2-202ENST00000372748 SLFN12LQ6IEE8 588 aa15.34■□□□□ 0.05
COL9A2-202ENST00000372748 C16orf46Q6P387 395 aa15.34■□□□□ 0.05
COL9A2-202ENST00000372748 EEPD1Q7L9B9 569 aa15.34■□□□□ 0.05
COL9A2-202ENST00000372748 RSPH3Q86UC2 560 aa15.34■□□□□ 0.05
COL9A2-202ENST00000372748 SPATA24Q86W54 205 aa15.34■□□□□ 0.05
COL9A2-202ENST00000372748 THNSL1Q8IYQ7 743 aa15.34■□□□□ 0.05
COL9A2-202ENST00000372748 NAT14Q8WUY8 206 aa15.34■□□□□ 0.05
COL9A2-202ENST00000372748 CDHR1Q96JP9 859 aa15.34■□□□□ 0.05
COL9A2-202ENST00000372748 HAPLN3Q96S86 360 aa15.34■□□□□ 0.05
COL9A2-202ENST00000372748 DHX33Q9H6R0 707 aaKnown RBP15.34■□□□□ 0.05
COL9A2-202ENST00000372748 SDR42E2A6NKP2 422 aa15.34■□□□□ 0.05
COL9A2-202ENST00000372748 CREB3O43889 395 aa15.34■□□□□ 0.05
COL9A2-202ENST00000372748 ASS1P00966 412 aaKnown RBP15.34■□□□□ 0.05
COL9A2-202ENST00000372748 VCLP18206 1134 aa15.34■□□□□ 0.05
COL9A2-202ENST00000372748 NAMPTP43490 491 aa15.34■□□□□ 0.05
COL9A2-202ENST00000372748 GMPSP49915 693 aaPredicted RBP15.34■□□□□ 0.05
COL9A2-202ENST00000372748 LSAMPQ13449 338 aa15.34■□□□□ 0.05
COL9A2-202ENST00000372748 ANGEL2Q5VTE6 544 aaKnown RBP15.34■□□□□ 0.05
COL9A2-202ENST00000372748 DPY19L2Q6NUT2 758 aa15.34■□□□□ 0.05
COL9A2-202ENST00000372748 TRIM42Q8IWZ5 723 aa15.34■□□□□ 0.05
COL9A2-202ENST00000372748 TEX13BQ9BXU2 312 aa15.34■□□□□ 0.05
COL9A2-202ENST00000372748 XAB2Q9HCS7 855 aaKnown RBP15.34■□□□□ 0.05
COL9A2-202ENST00000372748 DNAJB4Q9UDY4 337 aa15.34■□□□□ 0.05
COL9A2-202ENST00000372748 EFR3BQ9Y2G0 817 aa15.34■□□□□ 0.05
COL9A2-202ENST00000372748 MAD1L1Q9Y6D9 718 aa15.34■□□□□ 0.05
COL9A2-202ENST00000372748 COMMD3-BMI1R4GMX3 469 aa15.34■□□□□ 0.05
COL9A2-202ENST00000372748 ZMPSTE24O75844 475 aa15.33■□□□□ 0.04
COL9A2-202ENST00000372748 BPGMP07738 259 aa15.33■□□□□ 0.04
COL9A2-202ENST00000372748 UQCRBP14927 111 aa15.33■□□□□ 0.04
COL9A2-202ENST00000372748 TSHRP16473 764 aa15.33■□□□□ 0.04
COL9A2-202ENST00000372748 ARL2P36404 184 aa15.33■□□□□ 0.04
COL9A2-202ENST00000372748 OSTNP61366 133 aa15.33■□□□□ 0.04
COL9A2-202ENST00000372748 TAP1Q03518 808 aa15.33■□□□□ 0.04
COL9A2-202ENST00000372748 CAPSQ13938 189 aa15.33■□□□□ 0.04
COL9A2-202ENST00000372748 CCNIQ14094 377 aa15.33■□□□□ 0.04
COL9A2-202ENST00000372748 KYAT3Q6YP21 454 aaKnown RBP15.33■□□□□ 0.04
COL9A2-202ENST00000372748 CDR2LQ86X02 465 aaPredicted RBP15.33■□□□□ 0.04
COL9A2-202ENST00000372748 TMEM130Q8N3G9 435 aa15.33■□□□□ 0.04
COL9A2-202ENST00000372748 OLFM3Q96PB7 478 aa15.33■□□□□ 0.04
COL9A2-202ENST00000372748 KLHL4Q9C0H6 718 aa15.33■□□□□ 0.04
COL9A2-202ENST00000372748 DNAJC16Q9Y2G8 782 aa15.33■□□□□ 0.04
COL9A2-202ENST00000372748 MAFBQ9Y5Q3 323 aaPredicted RBP15.33■□□□□ 0.04
COL9A2-202ENST00000372748 HMX2A2RU54 273 aa15.33■□□□□ 0.04
COL9A2-202ENST00000372748 PIK3R2O00459 728 aa15.33■□□□□ 0.04
COL9A2-202ENST00000372748 KCNN4O15554 427 aa15.33■□□□□ 0.04
COL9A2-202ENST00000372748 SNNO75324 88 aaPredicted RBP15.33■□□□□ 0.04
COL9A2-202ENST00000372748 LDHAP00338 332 aaKnown RBP15.33■□□□□ 0.04
COL9A2-202ENST00000372748 SRGAP2CP0DJJ0 459 aa15.33■□□□□ 0.04
COL9A2-202ENST00000372748 HNRNPDQ14103 355 aaKnown RBP15.33■□□□□ 0.04
COL9A2-202ENST00000372748 LARP7Q4G0J3 582 aaKnown RBP eCLIP15.33■□□□□ 0.04
COL9A2-202ENST00000372748 HPS6Q86YV9 775 aa15.33■□□□□ 0.04
COL9A2-202ENST00000372748 UBR7Q8N806 425 aa15.33■□□□□ 0.04
COL9A2-202ENST00000372748 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.33■□□□□ 0.042e-6■■■□□ 16.7
COL9A2-202ENST00000372748 DNAJC1Q96KC8 554 aaKnown RBP15.33■□□□□ 0.04
COL9A2-202ENST00000372748 ZNF778Q96MU6 729 aa15.33■□□□□ 0.04
COL9A2-202ENST00000372748 CPXM1Q96SM3 734 aa15.33■□□□□ 0.04
COL9A2-202ENST00000372748 POPDC2Q9HBU9 364 aa15.33■□□□□ 0.04
COL9A2-202ENST00000372748 NXF1Q9UBU9 619 aaKnown RBP15.33■□□□□ 0.04
COL9A2-202ENST00000372748 PACSIN3Q9UKS6 424 aa15.33■□□□□ 0.04
COL9A2-202ENST00000372748 HEY1Q9Y5J3 304 aa15.33■□□□□ 0.04
COL9A2-202ENST00000372748 PABPC4LP0CB38 370 aaKnown RBP15.32■□□□□ 0.04
COL9A2-202ENST00000372748 EIF4BP23588 611 aaKnown RBP15.32■□□□□ 0.04
COL9A2-202ENST00000372748 RAP1GAPP47736 663 aa15.32■□□□□ 0.04
COL9A2-202ENST00000372748 INHBCP55103 352 aa15.32■□□□□ 0.04
COL9A2-202ENST00000372748 CDH6P55285 790 aa15.32■□□□□ 0.04
COL9A2-202ENST00000372748 TGFB2P61812 414 aa15.32■□□□□ 0.04
COL9A2-202ENST00000372748 RPL10AP62906 217 aaKnown RBP15.32■□□□□ 0.04
COL9A2-202ENST00000372748 ENPEPQ07075 957 aa15.32■□□□□ 0.04
COL9A2-202ENST00000372748 STXBP2Q15833 593 aa15.32■□□□□ 0.04
COL9A2-202ENST00000372748 GRAMD1BQ3KR37 738 aa15.32■□□□□ 0.04
COL9A2-202ENST00000372748 STKLD1Q8NE28 680 aa15.32■□□□□ 0.04
COL9A2-202ENST00000372748 C1orf21Q9H246 121 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms