RNA–Protein interactions for RNA: ENST00000372195.5

RAPGEF1-203, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-203ENST00000372195 ZC3H11AO75152 810 aaKnown RBP eCLIP24.62■■□□□ 1.53
RAPGEF1-203ENST00000372195 ABCB1P08183 1280 aaPredicted RBP24.62■■□□□ 1.53
RAPGEF1-203ENST00000372195 AKAP5P24588 427 aa24.62■■□□□ 1.53
RAPGEF1-203ENST00000372195 SSTR1P30872 391 aa24.62■■□□□ 1.53
RAPGEF1-203ENST00000372195 NT5DC3Q86UY8 548 aa24.62■■□□□ 1.53
RAPGEF1-203ENST00000372195 PPP1R10Q96QC0 940 aaKnown RBP24.62■■□□□ 1.53
RAPGEF1-203ENST00000372195 TMEM79Q9BSE2 394 aa24.62■■□□□ 1.53
RAPGEF1-203ENST00000372195 KLHL25Q9H0H3 589 aa24.62■■□□□ 1.53
RAPGEF1-203ENST00000372195 C17orf75Q9HAS0 396 aa24.62■■□□□ 1.53
RAPGEF1-203ENST00000372195 TSPAN3O60637 253 aa24.62■■□□□ 1.53
RAPGEF1-203ENST00000372195 EXD1Q8NHP7 514 aa24.62■■□□□ 1.53
RAPGEF1-203ENST00000372195 ADAM32Q8TC27 787 aa24.62■■□□□ 1.53
RAPGEF1-203ENST00000372195 RXFP1Q9HBX9 757 aa24.62■■□□□ 1.53
RAPGEF1-203ENST00000372195 CNTNAP2Q9UHC6 1331 aa24.62■■□□□ 1.53
RAPGEF1-203ENST00000372195 CHRNB3Q05901 458 aa24.62■■□□□ 1.53
RAPGEF1-203ENST00000372195 POU5F2Q8N7G0 328 aa24.62■■□□□ 1.53
RAPGEF1-203ENST00000372195 SATB2Q9UPW6 733 aa24.62■■□□□ 1.53
RAPGEF1-203ENST00000372195 FGFR2P21802 821 aa24.61■■□□□ 1.53
RAPGEF1-203ENST00000372195 ELK3P41970 407 aa24.61■■□□□ 1.53
RAPGEF1-203ENST00000372195 PLEKHA7Q6IQ23 1121 aa24.61■■□□□ 1.53
RAPGEF1-203ENST00000372195 TFAP2DQ7Z6R9 452 aa24.61■■□□□ 1.53
RAPGEF1-203ENST00000372195 TIMM44O43615 452 aa24.61■■□□□ 1.53
RAPGEF1-203ENST00000372195 ALDH7A1P49419 539 aaKnown RBP24.61■■□□□ 1.53
RAPGEF1-203ENST00000372195 PPP4CP60510 307 aa24.61■■□□□ 1.53
RAPGEF1-203ENST00000372195 LAMTOR4Q0VGL1 99 aa24.61■■□□□ 1.53
RAPGEF1-203ENST00000372195 VN1R5Q7Z5H4 357 aa24.61■■□□□ 1.53
RAPGEF1-203ENST00000372195 TCP10LQ8TDR4 215 aa24.61■■□□□ 1.53
RAPGEF1-203ENST00000372195 LTFP02788 710 aa24.61■■□□□ 1.53
RAPGEF1-203ENST00000372195 CYP2C8P10632 490 aa24.61■■□□□ 1.53
RAPGEF1-203ENST00000372195 RBM43Q6ZSC3 357 aaKnown RBP24.61■■□□□ 1.53
RAPGEF1-203ENST00000372195 TRIM69Q86WT6 500 aa24.61■■□□□ 1.53
RAPGEF1-203ENST00000372195 RDM1Q8NG50 284 aa24.61■■□□□ 1.53
RAPGEF1-203ENST00000372195 CAVIN3Q969G5 261 aa24.61■■□□□ 1.53
RAPGEF1-203ENST00000372195 INTS13Q9NVM9 706 aa24.61■■□□□ 1.53
RAPGEF1-203ENST00000372195 SLC12A8A0AV02 714 aa24.61■■□□□ 1.53
RAPGEF1-203ENST00000372195 MUTP22033 750 aa24.61■■□□□ 1.53
RAPGEF1-203ENST00000372195 MGAT1P26572 445 aa24.61■■□□□ 1.53
RAPGEF1-203ENST00000372195 TKTL1P51854 596 aa24.61■■□□□ 1.53
RAPGEF1-203ENST00000372195 OXCT1P55809 520 aa24.61■■□□□ 1.53
RAPGEF1-203ENST00000372195 ERAP2Q6P179 960 aa24.61■■□□□ 1.53
RAPGEF1-203ENST00000372195 NUDT12Q9BQG2 462 aa24.61■■□□□ 1.53
RAPGEF1-203ENST00000372195 TP53BP2Q13625 1128 aa24.61■■□□□ 1.53
RAPGEF1-203ENST00000372195 CCNG2Q16589 344 aa24.61■■□□□ 1.53
RAPGEF1-203ENST00000372195 ZSCAN18Q8TBC5 510 aaPredicted RBP24.61■■□□□ 1.53
RAPGEF1-203ENST00000372195 FIG4Q92562 907 aa24.61■■□□□ 1.53
RAPGEF1-203ENST00000372195 CEP170BQ9Y4F5 1589 aaPredicted RBP24.61■■□□□ 1.53
RAPGEF1-203ENST00000372195 CBX4O00257 560 aa24.6■■□□□ 1.53
RAPGEF1-203ENST00000372195 SV2AQ7L0J3 742 aa24.6■■□□□ 1.53
RAPGEF1-203ENST00000372195 MCOLN2Q8IZK6 566 aa24.6■■□□□ 1.53
RAPGEF1-203ENST00000372195 MYO1HQ8N1T3 1032 aa24.6■■□□□ 1.53
RAPGEF1-203ENST00000372195 CAMSAP1Q5T5Y3 1602 aa24.6■■□□□ 1.53
RAPGEF1-203ENST00000372195 SASH3O75995 380 aa24.6■■□□□ 1.53
RAPGEF1-203ENST00000372195 NTRK3Q16288 839 aa24.6■■□□□ 1.53
RAPGEF1-203ENST00000372195 NFIL3Q16649 462 aa24.6■■□□□ 1.53
RAPGEF1-203ENST00000372195 SLC25A13Q9UJS0 675 aa24.6■■□□□ 1.53
RAPGEF1-203ENST00000372195 MICAL2O94851 1124 aa24.6■■□□□ 1.53
RAPGEF1-203ENST00000372195 GPC1P35052 558 aa24.6■■□□□ 1.53
RAPGEF1-203ENST00000372195 BCAT1P54687 386 aa24.6■■□□□ 1.53
RAPGEF1-203ENST00000372195 PTENP60484 403 aa24.6■■□□□ 1.53
RAPGEF1-203ENST00000372195 STAU1O95793 577 aaKnown RBP24.6■■□□□ 1.53
RAPGEF1-203ENST00000372195 PTPN4P29074 926 aa24.6■■□□□ 1.53
RAPGEF1-203ENST00000372195 POLD3Q15054 466 aaPredicted RBP24.6■■□□□ 1.53
RAPGEF1-203ENST00000372195 ACTL9Q8TC94 416 aa24.6■■□□□ 1.53
RAPGEF1-203ENST00000372195 O00370 1275 aa24.6■■□□□ 1.53
RAPGEF1-203ENST00000372195 NPM3O75607 178 aaKnown RBP24.6■■□□□ 1.53
RAPGEF1-203ENST00000372195 CETPP11597 493 aa24.6■■□□□ 1.53
RAPGEF1-203ENST00000372195 MPP3Q13368 585 aa24.6■■□□□ 1.53
RAPGEF1-203ENST00000372195 ITGA9Q13797 1035 aa24.6■■□□□ 1.53
RAPGEF1-203ENST00000372195 CHMP1BQ7LBR1 199 aa24.6■■□□□ 1.53
RAPGEF1-203ENST00000372195 OSMRQ99650 979 aa24.6■■□□□ 1.53
RAPGEF1-203ENST00000372195 FRMD8P1Q9BZ68 369 aaPredicted RBP24.6■■□□□ 1.53
RAPGEF1-203ENST00000372195 A0A0A6YYK5 440 aaPredicted RBP24.59■■□□□ 1.53
RAPGEF1-203ENST00000372195 CRYMQ14894 314 aa24.59■■□□□ 1.53
RAPGEF1-203ENST00000372195 WDR49Q8IV35 697 aa24.59■■□□□ 1.53
RAPGEF1-203ENST00000372195 FRMD8Q9BZ67 464 aaPredicted RBP24.59■■□□□ 1.53
RAPGEF1-203ENST00000372195 EHD4Q9H223 541 aa24.59■■□□□ 1.53
RAPGEF1-203ENST00000372195 GSTM1P09488 218 aa24.59■■□□□ 1.53
RAPGEF1-203ENST00000372195 PKN2Q16513 984 aaKnown RBP24.59■■□□□ 1.53
RAPGEF1-203ENST00000372195 RMND5AQ9H871 391 aa24.59■■□□□ 1.53
RAPGEF1-203ENST00000372195 SNX8Q9Y5X2 465 aa24.59■■□□□ 1.53
RAPGEF1-203ENST00000372195 CCNT2O60583 730 aaKnown RBP24.59■■□□□ 1.53
RAPGEF1-203ENST00000372195 ERMARDQ5T6L9 678 aa24.59■■□□□ 1.53
RAPGEF1-203ENST00000372195 ARMC6Q6NXE6 501 aa24.59■■□□□ 1.53
RAPGEF1-203ENST00000372195 OSBPL10Q9BXB5 764 aa24.59■■□□□ 1.53
RAPGEF1-203ENST00000372195 MYLK2Q9H1R3 596 aa24.59■■□□□ 1.53
RAPGEF1-203ENST00000372195 IL17RBQ9NRM6 502 aa24.59■■□□□ 1.53
RAPGEF1-203ENST00000372195 GNG14A0A1W2PPG7 69 aa24.59■■□□□ 1.53
RAPGEF1-203ENST00000372195 TTLL13PA6NNM8 815 aa24.59■■□□□ 1.53
RAPGEF1-203ENST00000372195 CDH8P55286 799 aa24.59■■□□□ 1.53
RAPGEF1-203ENST00000372195 CSTF3Q12996 717 aaKnown RBP24.59■■□□□ 1.53
RAPGEF1-203ENST00000372195 MPP4Q96JB8 637 aa24.59■■□□□ 1.53
RAPGEF1-203ENST00000372195 GLP2RO95838 553 aa24.59■■□□□ 1.53
RAPGEF1-203ENST00000372195 TIGD7Q6NT04 549 aaPredicted RBP24.59■■□□□ 1.53
RAPGEF1-203ENST00000372195 OR8H2Q8N162 312 aa24.59■■□□□ 1.53
RAPGEF1-203ENST00000372195 KRT84Q9NSB2 600 aa24.59■■□□□ 1.53
RAPGEF1-203ENST00000372195 CNTN1Q12860 1018 aa24.58■■□□□ 1.53
RAPGEF1-203ENST00000372195 TBCELQ5QJ74 424 aa24.58■■□□□ 1.53
RAPGEF1-203ENST00000372195 TRIM48Q8IWZ4 208 aa24.58■■□□□ 1.53
RAPGEF1-203ENST00000372195 SEMA6AQ9H2E6 1030 aa24.58■■□□□ 1.53
RAPGEF1-203ENST00000372195 POMCP01189 267 aa24.58■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms