RNA–Protein interactions for RNA: ENST00000371649.5

EDF1-203, Transcript of endothelial differentiation related factor 1, humanhuman

TSL 2 BASIC

Gene EDF1, Length 790 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDF1-203ENST00000371649 SCAMP5Q8TAC9 235 aa16.6■□□□□ 0.25
EDF1-203ENST00000371649 PRCCQ92733 491 aaPredicted RBP16.6■□□□□ 0.25
EDF1-203ENST00000371649 TNIP3Q96KP6 325 aa16.6■□□□□ 0.25
EDF1-203ENST00000371649 KCNK16Q96T55 309 aa16.6■□□□□ 0.25
EDF1-203ENST00000371649 B3GNT5Q9BYG0 378 aa16.6■□□□□ 0.25
EDF1-203ENST00000371649 FBXO44Q9H4M3 255 aa16.6■□□□□ 0.25
EDF1-203ENST00000371649 CD93Q9NPY3 652 aa16.6■□□□□ 0.25
EDF1-203ENST00000371649 GMIPQ9P107 970 aa16.6■□□□□ 0.25
EDF1-203ENST00000371649 MORC2Q9Y6X9 1032 aaPredicted RBP16.6■□□□□ 0.25
EDF1-203ENST00000371649 APC2O95996 2303 aa16.6■□□□□ 0.25
EDF1-203ENST00000371649 LAMA5O15230 3695 aa16.59■□□□□ 0.25
EDF1-203ENST00000371649 CACNG3O60359 315 aa16.59■□□□□ 0.25
EDF1-203ENST00000371649 TLR5O60602 858 aa16.59■□□□□ 0.25
EDF1-203ENST00000371649 ATP5C1P36542 298 aaKnown RBP16.59■□□□□ 0.25
EDF1-203ENST00000371649 TEAD4Q15561 434 aa16.59■□□□□ 0.25
EDF1-203ENST00000371649 HLA-BQ31612 363 aa16.59■□□□□ 0.25
EDF1-203ENST00000371649 LRRC69Q6ZNQ3 347 aa16.59■□□□□ 0.25
EDF1-203ENST00000371649 LIMS2Q7Z4I7 341 aa16.59■□□□□ 0.25
EDF1-203ENST00000371649 CBWD2Q8IUF1 395 aa16.59■□□□□ 0.25
EDF1-203ENST00000371649 PDCD7Q8N8D1 485 aaKnown RBP16.59■□□□□ 0.25
EDF1-203ENST00000371649 CCDC127Q96BQ5 260 aa16.59■□□□□ 0.25
EDF1-203ENST00000371649 SIPA1Q96FS4 1042 aa16.59■□□□□ 0.25
EDF1-203ENST00000371649 SMARCD1Q96GM5 515 aa16.59■□□□□ 0.25
EDF1-203ENST00000371649 ZFRQ96KR1 1074 aaKnown RBP16.59■□□□□ 0.25
EDF1-203ENST00000371649 BBC3Q96PG8 261 aaPredicted RBP16.59■□□□□ 0.25
EDF1-203ENST00000371649 UBL7Q96S82 380 aaPredicted RBP16.59■□□□□ 0.25
EDF1-203ENST00000371649 IL21RQ9HBE5 538 aa16.59■□□□□ 0.25
EDF1-203ENST00000371649 COMMD8Q9NX08 183 aa16.59■□□□□ 0.25
EDF1-203ENST00000371649 WSB2Q9NYS7 404 aaPredicted RBP16.59■□□□□ 0.25
EDF1-203ENST00000371649 HSPBP1Q9NZL4 362 aa16.59■□□□□ 0.25
EDF1-203ENST00000371649 NFE2L3Q9Y4A8 694 aa16.59■□□□□ 0.25
EDF1-203ENST00000371649 STON1Q9Y6Q2 735 aa16.59■□□□□ 0.25
EDF1-203ENST00000371649 PTPRJQ12913 1337 aa16.59■□□□□ 0.25
EDF1-203ENST00000371649 SHROOM3Q8TF72 1996 aa16.58■□□□□ 0.25
EDF1-203ENST00000371649 WASH3PC4AMC7 463 aa16.58■□□□□ 0.24
EDF1-203ENST00000371649 PRRT4C9JH25 899 aa16.58■□□□□ 0.24
EDF1-203ENST00000371649 CBFA2T3O75081 653 aa16.58■□□□□ 0.24
EDF1-203ENST00000371649 AP1G2O75843 785 aa16.58■□□□□ 0.24
EDF1-203ENST00000371649 CST3P01034 146 aaPredicted RBP16.58■□□□□ 0.24
EDF1-203ENST00000371649 ATXN1LP0C7T5 689 aaKnown RBP16.58■□□□□ 0.24
EDF1-203ENST00000371649 ZNF132P52740 706 aa16.58■□□□□ 0.24
EDF1-203ENST00000371649 CDH8P55286 799 aa16.58■□□□□ 0.24
EDF1-203ENST00000371649 INAVAQ3KP66 663 aa16.58■□□□□ 0.24
EDF1-203ENST00000371649 SNX30Q5VWJ9 437 aa16.58■□□□□ 0.24
EDF1-203ENST00000371649 HTR3DQ70Z44 454 aa16.58■□□□□ 0.24
EDF1-203ENST00000371649 FAM35AQ86V20 835 aa16.58■□□□□ 0.24
EDF1-203ENST00000371649 SCUBE3Q8IX30 993 aa16.58■□□□□ 0.24
EDF1-203ENST00000371649 DNASE2BQ8WZ79 361 aa16.58■□□□□ 0.24
EDF1-203ENST00000371649 SYAP1Q96A49 352 aaPredicted RBP16.58■□□□□ 0.24
EDF1-203ENST00000371649 DNAJC19Q96DA6 116 aa16.58■□□□□ 0.24
EDF1-203ENST00000371649 DUSP9Q99956 384 aaKnown RBP16.58■□□□□ 0.24
EDF1-203ENST00000371649 NUP58Q9BVL2 599 aa16.58■□□□□ 0.24
EDF1-203ENST00000371649 ITM2CQ9NQX7 267 aa16.58■□□□□ 0.24
EDF1-203ENST00000371649 DKK4Q9UBT3 224 aa16.58■□□□□ 0.24
EDF1-203ENST00000371649 EIF2B4Q9UI10 523 aaKnown RBP16.58■□□□□ 0.24
EDF1-203ENST00000371649 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.58■□□□□ 0.24
EDF1-203ENST00000371649 NPC1O15118 1278 aa16.57■□□□□ 0.24
EDF1-203ENST00000371649 YEATS4O95619 227 aa16.57■□□□□ 0.24
EDF1-203ENST00000371649 PKP1Q13835 747 aa16.57■□□□□ 0.24
EDF1-203ENST00000371649 STK38Q15208 465 aa16.57■□□□□ 0.24
EDF1-203ENST00000371649 SNRNP35Q16560 246 aaKnown RBP16.57■□□□□ 0.24
EDF1-203ENST00000371649 FUT11Q495W5 492 aa16.57■□□□□ 0.24
EDF1-203ENST00000371649 FOXD4L5Q5VV16 416 aaPredicted RBP16.57■□□□□ 0.24
EDF1-203ENST00000371649 ADAT2Q7Z6V5 191 aaKnown RBP16.57■□□□□ 0.24
EDF1-203ENST00000371649 METTL3Q86U44 580 aaKnown RBP16.57■□□□□ 0.24
EDF1-203ENST00000371649 TMPRSS6Q8IU80 811 aa16.57■□□□□ 0.24
EDF1-203ENST00000371649 PIP4K2CQ8TBX8 421 aa16.57■□□□□ 0.24
EDF1-203ENST00000371649 FOXD4L4Q8WXT5 416 aaPredicted RBP16.57■□□□□ 0.24
EDF1-203ENST00000371649 IPO9Q96P70 1041 aaKnown RBP16.57■□□□□ 0.24
EDF1-203ENST00000371649 LRRC27Q9C0I9 530 aa16.57■□□□□ 0.24
EDF1-203ENST00000371649 PLK2Q9NYY3 685 aa16.57■□□□□ 0.24
EDF1-203ENST00000371649 FNDC3AQ9Y2H6 1198 aaKnown RBP16.57■□□□□ 0.24
EDF1-203ENST00000371649 PCDHGB2Q9Y5G2 931 aa16.57■□□□□ 0.24
EDF1-203ENST00000371649 FLNBO75369 2602 aaKnown RBP16.56■□□□□ 0.24
EDF1-203ENST00000371649 A0A1B0GVT2 93 aa16.56■□□□□ 0.24
EDF1-203ENST00000371649 FAM149AA5PLN7 773 aa16.56■□□□□ 0.24
EDF1-203ENST00000371649 METTL12A8MUP2 240 aa16.56■□□□□ 0.24
EDF1-203ENST00000371649 TNFSF14O43557 240 aa16.56■□□□□ 0.24
EDF1-203ENST00000371649 ATICP31939 592 aa16.56■□□□□ 0.24
EDF1-203ENST00000371649 NASPP49321 788 aaPredicted RBP16.56■□□□□ 0.24
EDF1-203ENST00000371649 TPMTP51580 245 aa16.56■□□□□ 0.24
EDF1-203ENST00000371649 AFF3P51826 1226 aaKnown RBP16.56■□□□□ 0.24
EDF1-203ENST00000371649 KRT85P78386 507 aa16.56■□□□□ 0.24
EDF1-203ENST00000371649 BIRC3Q13489 604 aa16.56■□□□□ 0.24
EDF1-203ENST00000371649 SLC39A14Q15043 492 aa16.56■□□□□ 0.24
EDF1-203ENST00000371649 USP49Q70CQ1 688 aa16.56■□□□□ 0.24
EDF1-203ENST00000371649 TADA2BQ86TJ2 420 aa16.56■□□□□ 0.24
EDF1-203ENST00000371649 FAM124AQ86V42 546 aa16.56■□□□□ 0.24
EDF1-203ENST00000371649 CACUL1Q86Y37 369 aa16.56■□□□□ 0.24
EDF1-203ENST00000371649 CGRRF1Q99675 332 aa16.56■□□□□ 0.24
EDF1-203ENST00000371649 PANK2Q9BZ23 570 aa16.56■□□□□ 0.24
EDF1-203ENST00000371649 KRT82Q9NSB4 513 aa16.56■□□□□ 0.24
EDF1-203ENST00000371649 TMEM30AQ9NV96 361 aa16.56■□□□□ 0.24
EDF1-203ENST00000371649 MARK1Q9P0L2 795 aa16.56■□□□□ 0.24
EDF1-203ENST00000371649 HCN2Q9UL51 889 aa16.56■□□□□ 0.24
EDF1-203ENST00000371649 P4HA1P13674 534 aa16.55■□□□□ 0.24
EDF1-203ENST00000371649 HLA-EP13747 358 aa16.55■□□□□ 0.24
EDF1-203ENST00000371649 HNF1BP35680 557 aa16.55■□□□□ 0.24
EDF1-203ENST00000371649 GRK6P43250 576 aa16.55■□□□□ 0.24
EDF1-203ENST00000371649 CSNK1EP49674 416 aaKnown RBP16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms