RNA–Protein interactions for RNA: ENST00000370651.5

PTP4A1-201, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTP4A1, Length 5,088 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-201ENST00000370651 ZC3H4Q9UPT8 1303 aaKnown RBP17.63■□□□□ 0.41
PTP4A1-201ENST00000370651 RGS5O15539 181 aa17.62■□□□□ 0.41
PTP4A1-201ENST00000370651 SUPT20HL2P0C7V6 817 aa17.62■□□□□ 0.41
PTP4A1-201ENST00000370651 ATP6V1B2P21281 511 aa17.62■□□□□ 0.41
PTP4A1-201ENST00000370651 CSHL1Q14406 222 aa17.62■□□□□ 0.41
PTP4A1-201ENST00000370651 AMHR2Q16671 573 aa17.62■□□□□ 0.41
PTP4A1-201ENST00000370651 INTS5Q6P9B9 1019 aaKnown RBP17.62■□□□□ 0.41
PTP4A1-201ENST00000370651 SNX32Q86XE0 403 aa17.62■□□□□ 0.41
PTP4A1-201ENST00000370651 GANCQ8TET4 914 aa17.62■□□□□ 0.41
PTP4A1-201ENST00000370651 GPRC5DQ9NZD1 345 aa17.62■□□□□ 0.41
PTP4A1-201ENST00000370651 RNF225M0QZC1 329 aaPredicted RBP17.62■□□□□ 0.41
PTP4A1-201ENST00000370651 ZSCAN5DPP0CG00 497 aa17.62■□□□□ 0.41
PTP4A1-201ENST00000370651 PDK4Q16654 411 aa17.62■□□□□ 0.41
PTP4A1-201ENST00000370651 SLC30A10Q6XR72 485 aa17.62■□□□□ 0.41
PTP4A1-201ENST00000370651 ZNF398Q8TD17 642 aa17.62■□□□□ 0.41
PTP4A1-201ENST00000370651 CASP10Q92851 521 aa17.62■□□□□ 0.41
PTP4A1-201ENST00000370651 SH3GL2Q99962 352 aa17.62■□□□□ 0.41
PTP4A1-201ENST00000370651 VTI1BQ9UEU0 232 aa17.62■□□□□ 0.41
PTP4A1-201ENST00000370651 VANGL2Q9ULK5 521 aa17.62■□□□□ 0.41
PTP4A1-201ENST00000370651 CLOCKO15516 846 aa17.62■□□□□ 0.41
PTP4A1-201ENST00000370651 AKT1P31749 480 aa17.62■□□□□ 0.41
PTP4A1-201ENST00000370651 TWF1Q12792 350 aa17.62■□□□□ 0.41
PTP4A1-201ENST00000370651 ATP1A4Q13733 1029 aa17.62■□□□□ 0.41
PTP4A1-201ENST00000370651 COL9A3Q14050 684 aaPredicted RBP17.62■□□□□ 0.41
PTP4A1-201ENST00000370651 GALNTL6Q49A17 601 aa17.62■□□□□ 0.41
PTP4A1-201ENST00000370651 CACHD1Q5VU97 1274 aa17.62■□□□□ 0.41
PTP4A1-201ENST00000370651 PKN3Q6P5Z2 889 aa17.62■□□□□ 0.41
PTP4A1-201ENST00000370651 FASTKD5Q7L8L6 764 aaKnown RBP17.62■□□□□ 0.41
PTP4A1-201ENST00000370651 ART4Q93070 314 aa17.62■□□□□ 0.41
PTP4A1-201ENST00000370651 CYP3A43Q9HB55 503 aa17.62■□□□□ 0.41
PTP4A1-201ENST00000370651 CROTQ9UKG9 612 aa17.62■□□□□ 0.41
PTP4A1-201ENST00000370651 NCANO14594 1321 aa17.62■□□□□ 0.41
PTP4A1-201ENST00000370651 RNF103O00237 685 aa17.62■□□□□ 0.41
PTP4A1-201ENST00000370651 ADARP55265 1226 aaKnown RBP17.62■□□□□ 0.41
PTP4A1-201ENST00000370651 NFIL3Q16649 462 aa17.62■□□□□ 0.41
PTP4A1-201ENST00000370651 ATP6AP1LQ52LC2 224 aa17.62■□□□□ 0.41
PTP4A1-201ENST00000370651 OTOP1Q7RTM1 612 aa17.62■□□□□ 0.41
PTP4A1-201ENST00000370651 LNX1Q8TBB1 728 aaPredicted RBP17.62■□□□□ 0.41
PTP4A1-201ENST00000370651 ELMO3Q96BJ8 720 aa17.62■□□□□ 0.41
PTP4A1-201ENST00000370651 GPAMQ9HCL2 828 aa17.62■□□□□ 0.41
PTP4A1-201ENST00000370651 VWA5AO00534 786 aa17.61■□□□□ 0.41
PTP4A1-201ENST00000370651 MT-CO1P00395 513 aa17.61■□□□□ 0.41
PTP4A1-201ENST00000370651 RAD23AP54725 363 aa17.61■□□□□ 0.41
PTP4A1-201ENST00000370651 NOTUMQ6P988 496 aa17.61■□□□□ 0.41
PTP4A1-201ENST00000370651 KYAT3Q6YP21 454 aaKnown RBP17.61■□□□□ 0.41
PTP4A1-201ENST00000370651 DHFR2Q86XF0 187 aa17.61■□□□□ 0.41
PTP4A1-201ENST00000370651 BLOC1S5Q8TDH9 187 aa17.61■□□□□ 0.41
PTP4A1-201ENST00000370651 PLEKHA8Q96JA3 519 aa17.61■□□□□ 0.41
PTP4A1-201ENST00000370651 TBCBQ99426 244 aa17.61■□□□□ 0.41
PTP4A1-201ENST00000370651 AGO4Q9HCK5 861 aaKnown RBP17.61■□□□□ 0.41
PTP4A1-201ENST00000370651 COPG2Q9UBF2 871 aa17.61■□□□□ 0.41
PTP4A1-201ENST00000370651 CORO1CQ9ULV4 474 aaPredicted RBP17.61■□□□□ 0.41
PTP4A1-201ENST00000370651 FARP1Q9Y4F1 1045 aaPredicted RBP17.61■□□□□ 0.41
PTP4A1-201ENST00000370651 DDHD2O94830 711 aa17.61■□□□□ 0.41
PTP4A1-201ENST00000370651 F9P00740 461 aa17.61■□□□□ 0.41
PTP4A1-201ENST00000370651 JCHAINP01591 159 aa17.61■□□□□ 0.41
PTP4A1-201ENST00000370651 ATP6V1C1P21283 382 aa17.61■□□□□ 0.41
PTP4A1-201ENST00000370651 BCAT1P54687 386 aa17.61■□□□□ 0.41
PTP4A1-201ENST00000370651 GLRA4Q5JXX5 417 aa17.61■□□□□ 0.41
PTP4A1-201ENST00000370651 LRMDAQ9H2I8 198 aa17.61■□□□□ 0.41
PTP4A1-201ENST00000370651 GGA3Q9NZ52 723 aa17.61■□□□□ 0.41
PTP4A1-201ENST00000370651 CNTNAP4Q9C0A0 1308 aa17.61■□□□□ 0.41
PTP4A1-201ENST00000370651 AP1G2O75843 785 aa17.61■□□□□ 0.41
PTP4A1-201ENST00000370651 KRT36O76013 467 aa17.61■□□□□ 0.41
PTP4A1-201ENST00000370651 MMP13P45452 471 aa17.61■□□□□ 0.41
PTP4A1-201ENST00000370651 DCTN2Q13561 401 aaKnown RBP17.61■□□□□ 0.41
PTP4A1-201ENST00000370651 ZNF268Q14587 947 aaPredicted RBP17.61■□□□□ 0.41
PTP4A1-201ENST00000370651 VEPH1Q14D04 833 aa17.61■□□□□ 0.41
PTP4A1-201ENST00000370651 GRTP1Q5TC63 336 aa17.61■□□□□ 0.41
PTP4A1-201ENST00000370651 CENPLQ8N0S6 344 aaPredicted RBP17.61■□□□□ 0.41
PTP4A1-201ENST00000370651 MPP6Q9NZW5 540 aa17.61■□□□□ 0.41
PTP4A1-201ENST00000370651 DRG1Q9Y295 367 aaKnown RBP17.61■□□□□ 0.41
PTP4A1-201ENST00000370651 ACO1P21399 889 aaKnown RBP17.61■□□□□ 0.41
PTP4A1-201ENST00000370651 ROR2Q01974 943 aaKnown RBP17.61■□□□□ 0.41
PTP4A1-201ENST00000370651 SPIRE2Q8WWL2 714 aa17.61■□□□□ 0.41
PTP4A1-201ENST00000370651 GPR63Q9BZJ6 419 aa17.61■□□□□ 0.41
PTP4A1-201ENST00000370651 LRRC19Q9H756 370 aa17.61■□□□□ 0.41
PTP4A1-201ENST00000370651 ITSN1Q15811 1721 aa17.61■□□□□ 0.41
PTP4A1-201ENST00000370651 A0A096LPK6 155 aa17.6■□□□□ 0.41
PTP4A1-201ENST00000370651 C1orf232A0A0U1RR37 186 aa17.6■□□□□ 0.41
PTP4A1-201ENST00000370651 TRDMT1O14717 391 aaKnown RBP17.6■□□□□ 0.41
PTP4A1-201ENST00000370651 LZTS3O60299 673 aaPredicted RBP17.6■□□□□ 0.41
PTP4A1-201ENST00000370651 NCALDP61601 193 aa17.6■□□□□ 0.41
PTP4A1-201ENST00000370651 QPCTQ16769 361 aa17.6■□□□□ 0.41
PTP4A1-201ENST00000370651 SYTL3Q4VX76 610 aa17.6■□□□□ 0.41
PTP4A1-201ENST00000370651 NET1Q7Z628 596 aaPredicted RBP17.6■□□□□ 0.41
PTP4A1-201ENST00000370651 CHSY1Q86X52 802 aa17.6■□□□□ 0.41
PTP4A1-201ENST00000370651 SORCS3Q9UPU3 1222 aa17.6■□□□□ 0.41
PTP4A1-201ENST00000370651 WDR27A2RRH5 827 aa17.6■□□□□ 0.41
PTP4A1-201ENST00000370651 STX7O15400 261 aaKnown RBP17.6■□□□□ 0.41
PTP4A1-201ENST00000370651 ABHD2P08910 425 aa17.6■□□□□ 0.41
PTP4A1-201ENST00000370651 CASP5P51878 434 aa17.6■□□□□ 0.41
PTP4A1-201ENST00000370651 B3GNT6Q6ZMB0 384 aa17.6■□□□□ 0.41
PTP4A1-201ENST00000370651 GRIP2Q9C0E4 1043 aa17.6■□□□□ 0.41
PTP4A1-201ENST00000370651 COPS7BQ9H9Q2 264 aaPredicted RBP17.6■□□□□ 0.41
PTP4A1-201ENST00000370651 WWOXQ9NZC7 414 aa17.6■□□□□ 0.41
PTP4A1-201ENST00000370651 APOC4-APOC2K7ER74 178 aa17.6■□□□□ 0.41
PTP4A1-201ENST00000370651 RASSF9O75901 435 aa17.6■□□□□ 0.41
PTP4A1-201ENST00000370651 APOC2P02655 101 aa17.6■□□□□ 0.41
PTP4A1-201ENST00000370651 CDK7P50613 346 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms