RNA–Protein interactions for RNA: ENST00000369603.9

SMNDC1-202, Transcript of survival motor neuron domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMNDC1, Length 4,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-202ENST00000369603 OR6P1Q8NGX9 317 aa5.5□□□□□ -1.53
SMNDC1-202ENST00000369603 WNT8BQ93098 351 aa5.5□□□□□ -1.53
SMNDC1-202ENST00000369603 TSPAN17Q96FV3 270 aa5.5□□□□□ -1.53
SMNDC1-202ENST00000369603 CDK5RAP1Q96SZ6 601 aaKnown RBP5.5□□□□□ -1.53
SMNDC1-202ENST00000369603 VAT1Q99536 393 aa5.5□□□□□ -1.53
SMNDC1-202ENST00000369603 ADAM2Q99965 735 aa5.5□□□□□ -1.53
SMNDC1-202ENST00000369603 ZNF670Q9BS34 389 aa5.5□□□□□ -1.53
SMNDC1-202ENST00000369603 TSSK1BQ9BXA7 367 aa5.5□□□□□ -1.53
SMNDC1-202ENST00000369603 MRPL9Q9BYD2 267 aaKnown RBP5.5□□□□□ -1.53
SMNDC1-202ENST00000369603 TXNRD2Q9NNW7 524 aa5.5□□□□□ -1.53
SMNDC1-202ENST00000369603 CYLDQ9NQC7 956 aa5.5□□□□□ -1.53
SMNDC1-202ENST00000369603 HES2Q9Y543 173 aa5.5□□□□□ -1.53
SMNDC1-202ENST00000369603 POMCP01189 267 aa5.5□□□□□ -1.53
SMNDC1-202ENST00000369603 LTFP02788 710 aa5.5□□□□□ -1.53
SMNDC1-202ENST00000369603 ABHD2P08910 425 aa5.5□□□□□ -1.53
SMNDC1-202ENST00000369603 CCDC130P13994 396 aa5.5□□□□□ -1.53
SMNDC1-202ENST00000369603 RECQLP46063 649 aaPredicted RBP5.5□□□□□ -1.53
SMNDC1-202ENST00000369603 MMEL1Q495T6 779 aa5.5□□□□□ -1.53
SMNDC1-202ENST00000369603 PTPN20Q4JDL3 420 aa5.5□□□□□ -1.53
SMNDC1-202ENST00000369603 AADACL2Q6P093 401 aa5.5□□□□□ -1.53
SMNDC1-202ENST00000369603 ACAD11Q709F0 780 aa5.5□□□□□ -1.53
SMNDC1-202ENST00000369603 IQCKQ8N0W5 287 aa5.5□□□□□ -1.53
SMNDC1-202ENST00000369603 PDCD7Q8N8D1 485 aaKnown RBP5.5□□□□□ -1.53
SMNDC1-202ENST00000369603 C12orf50Q8NA57 414 aaPredicted RBP5.5□□□□□ -1.53
SMNDC1-202ENST00000369603 STK32AQ8WU08 396 aa5.5□□□□□ -1.53
SMNDC1-202ENST00000369603 TEKT4Q8WW24 435 aa5.5□□□□□ -1.53
SMNDC1-202ENST00000369603 FIZ1Q96SL8 496 aa5.5□□□□□ -1.53
SMNDC1-202ENST00000369603 FTHL17Q9BXU8 183 aa5.5□□□□□ -1.53
SMNDC1-202ENST00000369603 YIPF3Q9GZM5 350 aa5.5□□□□□ -1.53
SMNDC1-202ENST00000369603 LRRC40Q9H9A6 602 aa5.5□□□□□ -1.53
SMNDC1-202ENST00000369603 APOBEC3GQ9HC16 384 aaKnown RBP5.5□□□□□ -1.53
SMNDC1-202ENST00000369603 OLA1Q9NTK5 396 aaKnown RBP5.5□□□□□ -1.53
SMNDC1-202ENST00000369603 FAM105AQ9NUU6 356 aa5.5□□□□□ -1.53
SMNDC1-202ENST00000369603 NINJ2Q9NZG7 142 aa5.5□□□□□ -1.53
SMNDC1-202ENST00000369603 AJAP1Q9UKB5 411 aaPredicted RBP5.5□□□□□ -1.53
SMNDC1-202ENST00000369603 TRHDEQ9UKU6 1024 aa5.5□□□□□ -1.53
SMNDC1-202ENST00000369603 ST3GAL5Q9UNP4 418 aa5.5□□□□□ -1.53
SMNDC1-202ENST00000369603 PCDHB5Q9Y5E4 795 aa5.5□□□□□ -1.53
SMNDC1-202ENST00000369603 SMIM28A0A1B0GU29 152 aa5.5□□□□□ -1.53
SMNDC1-202ENST00000369603 MAGEB16A2A368 324 aa5.5□□□□□ -1.53
SMNDC1-202ENST00000369603 EIF4E1BA6NMX2 242 aaKnown RBP5.5□□□□□ -1.53
SMNDC1-202ENST00000369603 TRIM49D1C9J1S8 452 aa5.5□□□□□ -1.53
SMNDC1-202ENST00000369603 GOLGA8RI6L899 631 aa5.5□□□□□ -1.53
SMNDC1-202ENST00000369603 CAPN15O75808 1086 aa5.5□□□□□ -1.53
SMNDC1-202ENST00000369603 ARIH2O95376 493 aa5.5□□□□□ -1.53
SMNDC1-202ENST00000369603 VNN1O95497 513 aa5.5□□□□□ -1.53
SMNDC1-202ENST00000369603 CHEK2O96017 543 aa5.5□□□□□ -1.53
SMNDC1-202ENST00000369603 LMNAP02545 664 aaKnown RBP5.5□□□□□ -1.53
SMNDC1-202ENST00000369603 KRT4P19013 534 aa5.5□□□□□ -1.53
SMNDC1-202ENST00000369603 MLH1P40692 756 aa5.5□□□□□ -1.53
SMNDC1-202ENST00000369603 ALDH1A3P47895 512 aa5.5□□□□□ -1.53
SMNDC1-202ENST00000369603 SLC11A2P49281 568 aa5.5□□□□□ -1.53
SMNDC1-202ENST00000369603 RAD23BP54727 409 aa5.5□□□□□ -1.53
SMNDC1-202ENST00000369603 TAS2R40P59535 323 aa5.5□□□□□ -1.53
SMNDC1-202ENST00000369603 RAD51Q06609 339 aa5.5□□□□□ -1.53
SMNDC1-202ENST00000369603 CACNB2Q08289 660 aaPredicted RBP5.5□□□□□ -1.53
SMNDC1-202ENST00000369603 ZNF792Q3KQV3 632 aa5.5□□□□□ -1.53
SMNDC1-202ENST00000369603 SYCP2LQ5T4T6 812 aa5.5□□□□□ -1.53
SMNDC1-202ENST00000369603 WSCD1Q658N2 575 aa5.5□□□□□ -1.53
SMNDC1-202ENST00000369603 SLC39A4Q6P5W5 647 aa5.5□□□□□ -1.53
SMNDC1-202ENST00000369603 ZNF449Q6P9G9 518 aa5.5□□□□□ -1.53
SMNDC1-202ENST00000369603 LVRNQ6Q4G3 990 aa5.5□□□□□ -1.53
SMNDC1-202ENST00000369603 CHSY1Q86X52 802 aa5.5□□□□□ -1.53
SMNDC1-202ENST00000369603 ZSWIM2Q8NEG5 633 aa5.5□□□□□ -1.53
SMNDC1-202ENST00000369603 HTR3CQ8WXA8 447 aa5.5□□□□□ -1.53
SMNDC1-202ENST00000369603 FBXO32Q969P5 355 aa5.5□□□□□ -1.53
SMNDC1-202ENST00000369603 ZNF669Q96BR6 464 aaPredicted RBP5.5□□□□□ -1.53
SMNDC1-202ENST00000369603 TMEM169Q96HH4 297 aa5.5□□□□□ -1.53
SMNDC1-202ENST00000369603 MAGEB18Q96M61 343 aa5.5□□□□□ -1.53
SMNDC1-202ENST00000369603 RNF157Q96PX1 679 aa5.5□□□□□ -1.53
SMNDC1-202ENST00000369603 PAFAH2Q99487 392 aa5.5□□□□□ -1.53
SMNDC1-202ENST00000369603 FAM167BQ9BTA0 163 aa5.5□□□□□ -1.53
SMNDC1-202ENST00000369603 STRA6Q9BX79 667 aa5.5□□□□□ -1.53
SMNDC1-202ENST00000369603 NXF3Q9H4D5 531 aaKnown RBP5.5□□□□□ -1.53
SMNDC1-202ENST00000369603 KIF9Q9HAQ2 790 aa5.5□□□□□ -1.53
SMNDC1-202ENST00000369603 AAASQ9NRG9 546 aa5.5□□□□□ -1.53
SMNDC1-202ENST00000369603 DCTN4Q9UJW0 460 aa5.5□□□□□ -1.53
SMNDC1-202ENST00000369603 NAALADL1Q9UQQ1 740 aa5.5□□□□□ -1.53
SMNDC1-202ENST00000369603 STXBP5LQ9Y2K9 1186 aa5.5□□□□□ -1.53
SMNDC1-202ENST00000369603 IPPQ9Y573 584 aa5.5□□□□□ -1.53
SMNDC1-202ENST00000369603 UBR3Q6ZT12 1888 aa5.49□□□□□ -1.53
SMNDC1-202ENST00000369603 SPECC1L-ADORA2AF8WAN1 911 aa5.49□□□□□ -1.53
SMNDC1-202ENST00000369603 PRRG1O14668 218 aa5.49□□□□□ -1.53
SMNDC1-202ENST00000369603 XPO1O14980 1071 aaKnown RBP5.49□□□□□ -1.53
SMNDC1-202ENST00000369603 TM9SF1O15321 606 aa5.49□□□□□ -1.53
SMNDC1-202ENST00000369603 CHADO15335 359 aa5.49□□□□□ -1.53
SMNDC1-202ENST00000369603 GYG2O15488 501 aa5.49□□□□□ -1.53
SMNDC1-202ENST00000369603 PGK1P00558 417 aa5.49□□□□□ -1.53
SMNDC1-202ENST00000369603 SLC4A1P02730 911 aa5.49□□□□□ -1.53
SMNDC1-202ENST00000369603 APOA4P06727 396 aa5.49□□□□□ -1.53
SMNDC1-202ENST00000369603 AIF1P55008 147 aa5.49□□□□□ -1.53
SMNDC1-202ENST00000369603 ILF2Q12905 390 aaKnown RBP5.49□□□□□ -1.53
SMNDC1-202ENST00000369603 GRIK3Q13003 919 aa5.49□□□□□ -1.53
SMNDC1-202ENST00000369603 STX3Q13277 289 aa5.49□□□□□ -1.53
SMNDC1-202ENST00000369603 DPYSL3Q14195 570 aa5.49□□□□□ -1.53
SMNDC1-202ENST00000369603 GRB14Q14449 540 aa5.49□□□□□ -1.53
SMNDC1-202ENST00000369603 ITIH4Q14624 930 aa5.49□□□□□ -1.53
SMNDC1-202ENST00000369603 TCEAL1Q15170 157 aa5.49□□□□□ -1.53
SMNDC1-202ENST00000369603 PAN2Q504Q3 1202 aaKnown RBP5.49□□□□□ -1.53
SMNDC1-202ENST00000369603 FAXCQ5TGI0 409 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms