RNA–Protein interactions for RNA: ENST00000368694.7

CHTOP-204, Transcript of chromatin target of PRMT1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CHTOP, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-204ENST00000368694 R3HDM2Q9Y2K5 976 aaKnown RBP20.25■□□□□ 0.83
CHTOP-204ENST00000368694 PLXNA3P51805 1871 aa20.25■□□□□ 0.83
CHTOP-204ENST00000368694 ZSCAN5CA6NGD5 496 aaPredicted RBP20.25■□□□□ 0.83
CHTOP-204ENST00000368694 HAPLN1P10915 354 aaPredicted RBP20.25■□□□□ 0.83
CHTOP-204ENST00000368694 DYNLT1P63172 113 aa20.25■□□□□ 0.83
CHTOP-204ENST00000368694 KRT17Q04695 432 aa20.25■□□□□ 0.83
CHTOP-204ENST00000368694 KCTD19Q17RG1 926 aaPredicted RBP20.25■□□□□ 0.83
CHTOP-204ENST00000368694 PPP6R3Q5H9R7 873 aaPredicted RBP20.25■□□□□ 0.83
CHTOP-204ENST00000368694 BTBD8Q5XKL5 378 aa20.25■□□□□ 0.83
CHTOP-204ENST00000368694 TTC27Q6P3X3 843 aa20.25■□□□□ 0.83
CHTOP-204ENST00000368694 DENND5BQ6ZUT9 1274 aa20.25■□□□□ 0.83
CHTOP-204ENST00000368694 RFX6Q8HWS3 928 aa20.25■□□□□ 0.83
CHTOP-204ENST00000368694 HERC6Q8IVU3 1022 aa20.25■□□□□ 0.83
CHTOP-204ENST00000368694 C12orf50Q8NA57 414 aaPredicted RBP20.25■□□□□ 0.83
CHTOP-204ENST00000368694 HERVK_113Q902F9 699 aa20.25■□□□□ 0.83
CHTOP-204ENST00000368694 SLC9A7Q96T83 725 aa20.25■□□□□ 0.83
CHTOP-204ENST00000368694 FAM118BQ9BPY3 351 aa20.25■□□□□ 0.83
CHTOP-204ENST00000368694 CLSTN3Q9BQT9 956 aa20.25■□□□□ 0.83
CHTOP-204ENST00000368694 DHX35Q9H5Z1 703 aaKnown RBP20.25■□□□□ 0.83
CHTOP-204ENST00000368694 FAM204AQ9H8W3 233 aa20.25■□□□□ 0.83
CHTOP-204ENST00000368694 PIGVQ9NUD9 493 aa20.25■□□□□ 0.83
CHTOP-204ENST00000368694 DDIT4Q9NX09 232 aa20.25■□□□□ 0.83
CHTOP-204ENST00000368694 FAM53CQ9NYF3 392 aa20.25■□□□□ 0.83
CHTOP-204ENST00000368694 TLL1O43897 1013 aa20.24■□□□□ 0.83
CHTOP-204ENST00000368694 ATP2A2P16615 1042 aaKnown RBP20.24■□□□□ 0.83
CHTOP-204ENST00000368694 CA8P35219 290 aa20.24■□□□□ 0.83
CHTOP-204ENST00000368694 COILP38432 576 aaPredicted RBP20.24■□□□□ 0.83
CHTOP-204ENST00000368694 CLCN6P51797 869 aa20.24■□□□□ 0.83
CHTOP-204ENST00000368694 DHX34Q14147 1143 aaKnown RBP20.24■□□□□ 0.83
CHTOP-204ENST00000368694 DPYSL3Q14195 570 aa20.24■□□□□ 0.83
CHTOP-204ENST00000368694 BRD3Q15059 726 aa20.24■□□□□ 0.83
CHTOP-204ENST00000368694 PDK2Q15119 407 aa20.24■□□□□ 0.83
CHTOP-204ENST00000368694 RUBCNQ92622 972 aa20.24■□□□□ 0.83
CHTOP-204ENST00000368694 MAK16Q9BXY0 300 aaKnown RBP20.24■□□□□ 0.83
CHTOP-204ENST00000368694 LRRC19Q9H756 370 aa20.24■□□□□ 0.83
CHTOP-204ENST00000368694 EPB41L5Q9HCM4 733 aa20.24■□□□□ 0.83
CHTOP-204ENST00000368694 HOMER3Q9NSC5 361 aa20.24■□□□□ 0.83
CHTOP-204ENST00000368694 GREB1Q4ZG55 1949 aa20.24■□□□□ 0.83
CHTOP-204ENST00000368694 CCDC151A5D8V7 595 aa20.23■□□□□ 0.83
CHTOP-204ENST00000368694 FGF18O76093 207 aa20.23■□□□□ 0.83
CHTOP-204ENST00000368694 ENDOD1O94919 500 aa20.23■□□□□ 0.83
CHTOP-204ENST00000368694 KCNJ1P48048 391 aa20.23■□□□□ 0.83
CHTOP-204ENST00000368694 FNTAP49354 379 aa20.23■□□□□ 0.83
CHTOP-204ENST00000368694 RPL10AP62906 217 aaKnown RBP20.23■□□□□ 0.83
CHTOP-204ENST00000368694 MMRN1Q13201 1228 aa20.23■□□□□ 0.83
CHTOP-204ENST00000368694 CA9Q16790 459 aa20.23■□□□□ 0.83
CHTOP-204ENST00000368694 AUTS2Q8WXX7 1259 aa20.23■□□□□ 0.83
CHTOP-204ENST00000368694 DPF3Q92784 378 aa20.23■□□□□ 0.83
CHTOP-204ENST00000368694 HAUS1Q96CS2 278 aa20.23■□□□□ 0.83
CHTOP-204ENST00000368694 RUNDC3BQ96NL0 473 aa20.23■□□□□ 0.83
CHTOP-204ENST00000368694 RAD9AQ99638 391 aa20.23■□□□□ 0.83
CHTOP-204ENST00000368694 DCLK3Q9C098 648 aa20.23■□□□□ 0.83
CHTOP-204ENST00000368694 MTIF3Q9H2K0 278 aaKnown RBP20.23■□□□□ 0.83
CHTOP-204ENST00000368694 ABCC13Q9NSE7 274 aa20.23■□□□□ 0.83
CHTOP-204ENST00000368694 PCYOX1Q9UHG3 505 aa20.23■□□□□ 0.83
CHTOP-204ENST00000368694 SCML2Q9UQR0 700 aa20.23■□□□□ 0.83
CHTOP-204ENST00000368694 EFR3BQ9Y2G0 817 aa20.23■□□□□ 0.83
CHTOP-204ENST00000368694 ESYT3A0FGR9 886 aa20.23■□□□□ 0.83
CHTOP-204ENST00000368694 CST8O60676 142 aa20.23■□□□□ 0.83
CHTOP-204ENST00000368694 ERLIN1O75477 346 aa20.23■□□□□ 0.83
CHTOP-204ENST00000368694 USP46P62068 366 aa20.23■□□□□ 0.83
CHTOP-204ENST00000368694 BNIPLQ7Z465 357 aa20.23■□□□□ 0.83
CHTOP-204ENST00000368694 IFT20Q8IY31 132 aa20.23■□□□□ 0.83
CHTOP-204ENST00000368694 MRPL17Q9NRX2 175 aaKnown RBP20.23■□□□□ 0.83
CHTOP-204ENST00000368694 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP20.23■□□□□ 0.83
CHTOP-204ENST00000368694 UTP11Q9Y3A2 253 aaKnown RBP20.23■□□□□ 0.83
CHTOP-204ENST00000368694 PLXNA4Q9HCM2 1894 aa20.22■□□□□ 0.83
CHTOP-204ENST00000368694 A0A1W2PQH9 124 aa20.22■□□□□ 0.83
CHTOP-204ENST00000368694 RTN3O95197 1032 aaPredicted RBP20.22■□□□□ 0.83
CHTOP-204ENST00000368694 YWHAQP27348 245 aa20.22■□□□□ 0.83
CHTOP-204ENST00000368694 ARSEP51690 589 aa20.22■□□□□ 0.83
CHTOP-204ENST00000368694 TERF2Q15554 542 aa20.22■□□□□ 0.83
CHTOP-204ENST00000368694 TAZQ16635 292 aa20.22■□□□□ 0.83
CHTOP-204ENST00000368694 SND1Q7KZF4 910 aaKnown RBP eCLIP20.22■□□□□ 0.83
CHTOP-204ENST00000368694 TRAF3IP1Q8TDR0 691 aaPredicted RBP20.22■□□□□ 0.83
CHTOP-204ENST00000368694 SPATA17Q96L03 361 aa20.22■□□□□ 0.83
CHTOP-204ENST00000368694 CCDC114Q96M63 670 aa20.22■□□□□ 0.83
CHTOP-204ENST00000368694 TRIM51Q9BSJ1 452 aa20.22■□□□□ 0.83
CHTOP-204ENST00000368694 PCDH18Q9HCL0 1135 aa20.22■□□□□ 0.83
CHTOP-204ENST00000368694 AFF4Q9UHB7 1163 aaKnown RBP20.22■□□□□ 0.83
CHTOP-204ENST00000368694 RASAL2Q9UJF2 1139 aa20.22■□□□□ 0.83
CHTOP-204ENST00000368694 COL4A4P53420 1690 aaPredicted RBP20.22■□□□□ 0.83
CHTOP-204ENST00000368694 CCNG2Q16589 344 aa20.22■□□□□ 0.83
CHTOP-204ENST00000368694 TAC4Q86UU9 113 aa20.22■□□□□ 0.83
CHTOP-204ENST00000368694 MON1AQ86VX9 555 aa20.22■□□□□ 0.83
CHTOP-204ENST00000368694 ZNF461Q8TAF7 563 aa20.22■□□□□ 0.83
CHTOP-204ENST00000368694 GIPC2Q8TF65 315 aa20.22■□□□□ 0.83
CHTOP-204ENST00000368694 CLP1Q92989 425 aaKnown RBP20.22■□□□□ 0.83
CHTOP-204ENST00000368694 FBXO32Q969P5 355 aa20.22■□□□□ 0.83
CHTOP-204ENST00000368694 PGAP3Q96FM1 320 aaPredicted RBP20.22■□□□□ 0.83
CHTOP-204ENST00000368694 FZD10Q9ULW2 581 aa20.22■□□□□ 0.83
CHTOP-204ENST00000368694 F9P00740 461 aa20.21■□□□□ 0.83
CHTOP-204ENST00000368694 TUFMP49411 452 aaKnown RBP20.21■□□□□ 0.83
CHTOP-204ENST00000368694 PGFP49763 221 aa20.21■□□□□ 0.83
CHTOP-204ENST00000368694 MTMR3Q13615 1198 aa20.21■□□□□ 0.83
CHTOP-204ENST00000368694 DPYSL2Q16555 572 aa20.21■□□□□ 0.83
CHTOP-204ENST00000368694 TMCO3Q6UWJ1 677 aa20.21■□□□□ 0.83
CHTOP-204ENST00000368694 BBS12Q6ZW61 710 aa20.21■□□□□ 0.83
CHTOP-204ENST00000368694 BEND5Q7L4P6 421 aa20.21■□□□□ 0.83
CHTOP-204ENST00000368694 SCD5Q86SK9 330 aa20.21■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms