RNA–Protein interactions for RNA: ENST00000368690.7

CHTOP-203, Transcript of chromatin target of PRMT1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CHTOP, Length 2,165 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-203ENST00000368690 TIMMDC1Q9NPL8 285 aa18.05■□□□□ 0.48
CHTOP-203ENST00000368690 ARHGAP28Q9P2N2 729 aa18.05■□□□□ 0.48
CHTOP-203ENST00000368690 ARID2Q68CP9 1835 aa18.05■□□□□ 0.48
CHTOP-203ENST00000368690 SF3B1O75533 1304 aaKnown RBP eCLIP18.05■□□□□ 0.48
CHTOP-203ENST00000368690 C15orf38-AP3S2A0A0A6YYH1 394 aa18.04■□□□□ 0.48
CHTOP-203ENST00000368690 VILLO15195 856 aa18.04■□□□□ 0.48
CHTOP-203ENST00000368690 SETSIPP0DME0 302 aa18.04■□□□□ 0.48
CHTOP-203ENST00000368690 EIF4BP23588 611 aaKnown RBP18.04■□□□□ 0.48
CHTOP-203ENST00000368690 ACAT1P24752 427 aaKnown RBP18.04■□□□□ 0.48
CHTOP-203ENST00000368690 MAGEA8P43361 318 aa18.04■□□□□ 0.48
CHTOP-203ENST00000368690 IREB2P48200 963 aaKnown RBP18.04■□□□□ 0.48
CHTOP-203ENST00000368690 DYNLT1P63172 113 aa18.04■□□□□ 0.48
CHTOP-203ENST00000368690 FOLH1Q04609 750 aa18.04■□□□□ 0.48
CHTOP-203ENST00000368690 UBAP2LQ14157 1087 aaKnown RBP18.04■□□□□ 0.48
CHTOP-203ENST00000368690 MOB2Q70IA6 237 aa18.04■□□□□ 0.48
CHTOP-203ENST00000368690 ANO5Q75V66 913 aa18.04■□□□□ 0.48
CHTOP-203ENST00000368690 ARPINQ7Z6K5 226 aa18.04■□□□□ 0.48
CHTOP-203ENST00000368690 PPM1NQ8N819 430 aa18.04■□□□□ 0.48
CHTOP-203ENST00000368690 FAM71DQ8N9W8 422 aa18.04■□□□□ 0.48
CHTOP-203ENST00000368690 IL31RAQ8NI17 732 aa18.04■□□□□ 0.48
CHTOP-203ENST00000368690 NRDE2Q9H7Z3 1164 aa18.04■□□□□ 0.48
CHTOP-203ENST00000368690 XAB2Q9HCS7 855 aaKnown RBP18.04■□□□□ 0.48
CHTOP-203ENST00000368690 SLC9A2Q9UBY0 812 aa18.04■□□□□ 0.48
CHTOP-203ENST00000368690 CDH22Q9UJ99 828 aa18.04■□□□□ 0.48
CHTOP-203ENST00000368690 CTDP1Q9Y5B0 961 aaPredicted RBP18.04■□□□□ 0.48
CHTOP-203ENST00000368690 SSTR3P32745 418 aaPredicted RBP18.04■□□□□ 0.48
CHTOP-203ENST00000368690 INHBCP55103 352 aa18.04■□□□□ 0.48
CHTOP-203ENST00000368690 HPCAP84074 193 aa18.04■□□□□ 0.48
CHTOP-203ENST00000368690 SLC25A3Q00325 362 aa18.04■□□□□ 0.48
CHTOP-203ENST00000368690 SNAPC2Q13487 334 aa18.04■□□□□ 0.48
CHTOP-203ENST00000368690 BORAQ6PGQ7 559 aa18.04■□□□□ 0.48
CHTOP-203ENST00000368690 TIFABQ6ZNK6 161 aa18.04■□□□□ 0.48
CHTOP-203ENST00000368690 TAS1R3Q7RTX0 852 aa18.04■□□□□ 0.48
CHTOP-203ENST00000368690 CPXCR1Q8N123 301 aa18.04■□□□□ 0.48
CHTOP-203ENST00000368690 MCPH1Q8NEM0 835 aa18.04■□□□□ 0.48
CHTOP-203ENST00000368690 LRRC39Q96DD0 335 aa18.04■□□□□ 0.48
CHTOP-203ENST00000368690 CATSPER2Q96P56 530 aa18.04■□□□□ 0.48
CHTOP-203ENST00000368690 C10orf88Q9H8K7 445 aa18.04■□□□□ 0.48
CHTOP-203ENST00000368690 ZNF408Q9H9D4 720 aa18.04■□□□□ 0.48
CHTOP-203ENST00000368690 CLIC5Q9NZA1 410 aa18.04■□□□□ 0.48
CHTOP-203ENST00000368690 C6orf203Q9P0P8 240 aaPredicted RBP18.04■□□□□ 0.48
CHTOP-203ENST00000368690 PCDHGC3Q9UN70 934 aa18.04■□□□□ 0.48
CHTOP-203ENST00000368690 NUB1Q9Y5A7 615 aa18.04■□□□□ 0.48
CHTOP-203ENST00000368690 PRDX6P30041 224 aa18.03■□□□□ 0.48
CHTOP-203ENST00000368690 FDFT1P37268 417 aa18.03■□□□□ 0.48
CHTOP-203ENST00000368690 SERPINB9P50453 376 aa18.03■□□□□ 0.48
CHTOP-203ENST00000368690 MRPS9P82933 396 aaKnown RBP18.03■□□□□ 0.48
CHTOP-203ENST00000368690 CNTN2Q02246 1040 aa18.03■□□□□ 0.48
CHTOP-203ENST00000368690 TBL3Q12788 808 aaKnown RBP18.03■□□□□ 0.48
CHTOP-203ENST00000368690 LMBRD2Q68DH5 695 aaPredicted RBP18.03■□□□□ 0.48
CHTOP-203ENST00000368690 KBTBD6Q86V97 674 aa18.03■□□□□ 0.48
CHTOP-203ENST00000368690 PIWIL2Q8TC59 973 aaKnown RBP18.03■□□□□ 0.48
CHTOP-203ENST00000368690 NMD3Q96D46 503 aaKnown RBP18.03■□□□□ 0.48
CHTOP-203ENST00000368690 FAM84AQ96KN4 292 aa18.03■□□□□ 0.48
CHTOP-203ENST00000368690 CGRRF1Q99675 332 aa18.03■□□□□ 0.48
CHTOP-203ENST00000368690 EBF4Q9BQW3 602 aa18.03■□□□□ 0.48
CHTOP-203ENST00000368690 MRPS26Q9BYN8 205 aaKnown RBP18.03■□□□□ 0.48
CHTOP-203ENST00000368690 PDLIM7Q9NR12 457 aa18.03■□□□□ 0.48
CHTOP-203ENST00000368690 MAP3K20Q9NYL2 800 aaKnown RBP18.03■□□□□ 0.48
CHTOP-203ENST00000368690 COL20A1Q9P218 1284 aa18.03■□□□□ 0.48
CHTOP-203ENST00000368690 APOBEC2Q9Y235 224 aaKnown RBP18.03■□□□□ 0.48
CHTOP-203ENST00000368690 SH3BP1Q9Y3L3 701 aa18.03■□□□□ 0.48
CHTOP-203ENST00000368690 STAM2O75886 525 aa18.03■□□□□ 0.48
CHTOP-203ENST00000368690 TFAP2AP05549 437 aa18.03■□□□□ 0.48
CHTOP-203ENST00000368690 KITP10721 976 aa18.03■□□□□ 0.48
CHTOP-203ENST00000368690 RBP3P10745 1247 aa18.03■□□□□ 0.48
CHTOP-203ENST00000368690 PSMA2P25787 234 aa18.03■□□□□ 0.48
CHTOP-203ENST00000368690 LIG4P49917 911 aa18.03■□□□□ 0.48
CHTOP-203ENST00000368690 TRIP10Q15642 601 aa18.03■□□□□ 0.48
CHTOP-203ENST00000368690 MCF2L2Q86YR7 1114 aa18.03■□□□□ 0.48
CHTOP-203ENST00000368690 CTAGE3PQ8IX95 158 aa18.03■□□□□ 0.48
CHTOP-203ENST00000368690 CMASQ8NFW8 434 aaPredicted RBP18.03■□□□□ 0.48
CHTOP-203ENST00000368690 CMTM5Q96DZ9 223 aa18.03■□□□□ 0.48
CHTOP-203ENST00000368690 C20orf27Q9GZN8 174 aa18.03■□□□□ 0.48
CHTOP-203ENST00000368690 RBM38Q9H0Z9 239 aaKnown RBP18.03■□□□□ 0.48
CHTOP-203ENST00000368690 ELP3Q9H9T3 547 aa18.03■□□□□ 0.48
CHTOP-203ENST00000368690 POPDC2Q9HBU9 364 aa18.03■□□□□ 0.48
CHTOP-203ENST00000368690 DNAJC28Q9NX36 388 aa18.03■□□□□ 0.48
CHTOP-203ENST00000368690 MARCOQ9UEW3 520 aaPredicted RBP18.03■□□□□ 0.48
CHTOP-203ENST00000368690 AGO2Q9UKV8 859 aaKnown RBP18.03■□□□□ 0.48
CHTOP-203ENST00000368690 POMPQ9Y244 141 aa18.03■□□□□ 0.48
CHTOP-203ENST00000368690 SCN4AP35499 1836 aa18.02■□□□□ 0.48
CHTOP-203ENST00000368690 WDR81Q562E7 1941 aa18.02■□□□□ 0.48
CHTOP-203ENST00000368690 PTPRJQ12913 1337 aa18.02■□□□□ 0.48
CHTOP-203ENST00000368690 MEI4A8MW99 385 aa18.02■□□□□ 0.48
CHTOP-203ENST00000368690 LRCH4O75427 683 aa18.02■□□□□ 0.48
CHTOP-203ENST00000368690 CLPTM1O96005 669 aa18.02■□□□□ 0.48
CHTOP-203ENST00000368690 ICAM1P05362 532 aa18.02■□□□□ 0.48
CHTOP-203ENST00000368690 MAGEA6P43360 314 aa18.02■□□□□ 0.48
CHTOP-203ENST00000368690 ERFP50548 548 aa18.02■□□□□ 0.48
CHTOP-203ENST00000368690 YWHAZP63104 245 aaKnown RBP18.02■□□□□ 0.48
CHTOP-203ENST00000368690 ROR1Q01973 937 aa18.02■□□□□ 0.48
CHTOP-203ENST00000368690 CREB5Q02930 508 aa18.02■□□□□ 0.48
CHTOP-203ENST00000368690 SULT2A1Q06520 285 aa18.02■□□□□ 0.48
CHTOP-203ENST00000368690 LRRC36Q1X8D7 754 aa18.02■□□□□ 0.48
CHTOP-203ENST00000368690 USP41Q3LFD5 358 aa18.02■□□□□ 0.48
CHTOP-203ENST00000368690 NOL9Q5SY16 702 aaKnown RBP18.02■□□□□ 0.48
CHTOP-203ENST00000368690 FBXL19Q6PCT2 694 aa18.02■□□□□ 0.48
CHTOP-203ENST00000368690 TMC7Q7Z402 723 aa18.02■□□□□ 0.48
CHTOP-203ENST00000368690 AHI1Q8N157 1196 aa18.02■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms