RNA–Protein interactions for RNA: ENST00000368439.5

CKS1B-203, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 1 (best) BASIC

Gene CKS1B, Length 912 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-203ENST00000368439 ATG13O75143 517 aa19.87■□□□□ 0.77
CKS1B-203ENST00000368439 GPD2P43304 727 aa19.87■□□□□ 0.77
CKS1B-203ENST00000368439 RPL34P49207 117 aaKnown RBP19.87■□□□□ 0.77
CKS1B-203ENST00000368439 RGS7P49802 495 aa19.87■□□□□ 0.77
CKS1B-203ENST00000368439 MFAP3P55082 362 aa19.87■□□□□ 0.77
CKS1B-203ENST00000368439 DAOAP59103 153 aa19.87■□□□□ 0.77
CKS1B-203ENST00000368439 GOLGA8FQ08AF8 430 aa19.87■□□□□ 0.77
CKS1B-203ENST00000368439 GOLGA8DPQ0D2H9 430 aa19.87■□□□□ 0.77
CKS1B-203ENST00000368439 EFEMP1Q12805 493 aa19.87■□□□□ 0.77
CKS1B-203ENST00000368439 RPLP0P6Q8NHW5 317 aa19.87■□□□□ 0.77
CKS1B-203ENST00000368439 P2RY11Q96G91 374 aa19.87■□□□□ 0.77
CKS1B-203ENST00000368439 PNKPQ96T60 521 aa19.87■□□□□ 0.77
CKS1B-203ENST00000368439 TUBGCP2Q9BSJ2 902 aa19.87■□□□□ 0.77
CKS1B-203ENST00000368439 EPC1Q9H2F5 836 aa19.87■□□□□ 0.77
CKS1B-203ENST00000368439 NDST4Q9H3R1 872 aa19.87■□□□□ 0.77
CKS1B-203ENST00000368439 ACP6Q9NPH0 428 aa19.87■□□□□ 0.77
CKS1B-203ENST00000368439 CNGB3Q9NQW8 809 aa19.87■□□□□ 0.77
CKS1B-203ENST00000368439 RASAL2Q9UJF2 1139 aa19.87■□□□□ 0.77
CKS1B-203ENST00000368439 MYO18AQ92614 2054 aaKnown RBP19.87■□□□□ 0.77
CKS1B-203ENST00000368439 EP300Q09472 2414 aaPredicted RBP19.86■□□□□ 0.77
CKS1B-203ENST00000368439 KRT5P13647 590 aa19.86■□□□□ 0.77
CKS1B-203ENST00000368439 LCP1P13796 627 aa19.86■□□□□ 0.77
CKS1B-203ENST00000368439 FNTBP49356 437 aa19.86■□□□□ 0.77
CKS1B-203ENST00000368439 VWA3BQ502W6 1294 aa19.86■□□□□ 0.77
CKS1B-203ENST00000368439 BSPRYQ5W0U4 402 aa19.86■□□□□ 0.77
CKS1B-203ENST00000368439 ENOX1Q8TC92 643 aaKnown RBP19.86■□□□□ 0.77
CKS1B-203ENST00000368439 USP33Q8TEY7 942 aa19.86■□□□□ 0.77
CKS1B-203ENST00000368439 SHC3Q92529 594 aa19.86■□□□□ 0.77
CKS1B-203ENST00000368439 HSFY1Q96LI6 401 aa19.86■□□□□ 0.77
CKS1B-203ENST00000368439 FAM81BQ96LP2 452 aa19.86■□□□□ 0.77
CKS1B-203ENST00000368439 MARK1Q9P0L2 795 aa19.86■□□□□ 0.77
CKS1B-203ENST00000368439 LSM7Q9UK45 103 aaKnown RBP19.86■□□□□ 0.77
CKS1B-203ENST00000368439 KCNJ18B7U540 433 aa19.85■□□□□ 0.77
CKS1B-203ENST00000368439 GOLGA6L22H0YM25 854 aa19.85■□□□□ 0.77
CKS1B-203ENST00000368439 TULP3O75386 442 aa19.85■□□□□ 0.77
CKS1B-203ENST00000368439 KAT7O95251 611 aa19.85■□□□□ 0.77
CKS1B-203ENST00000368439 COG7P83436 770 aa19.85■□□□□ 0.77
CKS1B-203ENST00000368439 KCNMA1Q12791 1236 aa19.85■□□□□ 0.77
CKS1B-203ENST00000368439 KCNJ12Q14500 433 aa19.85■□□□□ 0.77
CKS1B-203ENST00000368439 MEA1Q16626 185 aa19.85■□□□□ 0.77
CKS1B-203ENST00000368439 BTBD8Q5XKL5 378 aa19.85■□□□□ 0.77
CKS1B-203ENST00000368439 DENND1BQ6P3S1 775 aa19.85■□□□□ 0.77
CKS1B-203ENST00000368439 SYT13Q7L8C5 426 aa19.85■□□□□ 0.77
CKS1B-203ENST00000368439 LONP2Q86WA8 852 aa19.85■□□□□ 0.77
CKS1B-203ENST00000368439 SIX6OS1Q8N1H7 587 aa19.85■□□□□ 0.77
CKS1B-203ENST00000368439 CLEC4CQ8WTT0 213 aa19.85■□□□□ 0.77
CKS1B-203ENST00000368439 ZNF606Q8WXB4 792 aa19.85■□□□□ 0.77
CKS1B-203ENST00000368439 MARCH2Q9P0N8 246 aa19.85■□□□□ 0.77
CKS1B-203ENST00000368439 CYTH4Q9UIA0 394 aa19.85■□□□□ 0.77
CKS1B-203ENST00000368439 NFE2L3Q9Y4A8 694 aa19.85■□□□□ 0.77
CKS1B-203ENST00000368439 PIK3R2O00459 728 aa19.84■□□□□ 0.77
CKS1B-203ENST00000368439 HRO43593 1189 aa19.84■□□□□ 0.77
CKS1B-203ENST00000368439 PRKCSHP14314 528 aaPredicted RBP19.84■□□□□ 0.77
CKS1B-203ENST00000368439 ARHGAP44Q17R89 818 aa19.84■□□□□ 0.77
CKS1B-203ENST00000368439 TCP11X2Q5H9J9 407 aa19.84■□□□□ 0.77
CKS1B-203ENST00000368439 CDKAL1Q5VV42 579 aa19.84■□□□□ 0.77
CKS1B-203ENST00000368439 SMYD5Q6GMV2 418 aa19.84■□□□□ 0.77
CKS1B-203ENST00000368439 NAT16Q8N8M0 369 aa19.84■□□□□ 0.77
CKS1B-203ENST00000368439 IRGQQ8WZA9 623 aa19.84■□□□□ 0.77
CKS1B-203ENST00000368439 EDEM1Q92611 657 aa19.84■□□□□ 0.77
CKS1B-203ENST00000368439 ARHGEF4Q9NR80 690 aa19.84■□□□□ 0.77
CKS1B-203ENST00000368439 SLC12A8A0AV02 714 aa19.83■□□□□ 0.77
CKS1B-203ENST00000368439 PALM2-AKAP2B1ALY0 433 aaPredicted RBP19.83■□□□□ 0.77
CKS1B-203ENST00000368439 TRIM24O15164 1050 aa19.83■□□□□ 0.77
CKS1B-203ENST00000368439 CACNG3O60359 315 aa19.83■□□□□ 0.77
CKS1B-203ENST00000368439 LETM1O95202 739 aaPredicted RBP19.83■□□□□ 0.77
CKS1B-203ENST00000368439 APODP05090 189 aa19.83■□□□□ 0.77
CKS1B-203ENST00000368439 HMBSP08397 361 aa19.83■□□□□ 0.77
CKS1B-203ENST00000368439 EEF1GP26641 437 aaKnown RBP19.83■□□□□ 0.77
CKS1B-203ENST00000368439 GNA15P30679 374 aa19.83■□□□□ 0.77
CKS1B-203ENST00000368439 CORO1AP31146 461 aaKnown RBP19.83■□□□□ 0.77
CKS1B-203ENST00000368439 GRIA2P42262 883 aa19.83■□□□□ 0.77
CKS1B-203ENST00000368439 KIR2DL1P43626 348 aaPredicted RBP19.83■□□□□ 0.77
CKS1B-203ENST00000368439 SEC13P55735 322 aa19.83■□□□□ 0.77
CKS1B-203ENST00000368439 KDSRQ06136 332 aa19.83■□□□□ 0.77
CKS1B-203ENST00000368439 TRIP4Q15650 581 aaPredicted RBP19.83■□□□□ 0.77
CKS1B-203ENST00000368439 ANO4Q32M45 955 aa19.83■□□□□ 0.77
CKS1B-203ENST00000368439 HEATR6Q6AI08 1181 aaKnown RBP19.83■□□□□ 0.77
CKS1B-203ENST00000368439 C11orf57Q6ZUT1 292 aaPredicted RBP19.83■□□□□ 0.77
CKS1B-203ENST00000368439 RSRC2Q7L4I2 434 aaKnown RBP19.83■□□□□ 0.77
CKS1B-203ENST00000368439 WDR5BQ86VZ2 330 aa19.83■□□□□ 0.77
CKS1B-203ENST00000368439 CCDC26Q8TAB7 109 aa19.83■□□□□ 0.77
CKS1B-203ENST00000368439 STK32AQ8WU08 396 aa19.83■□□□□ 0.77
CKS1B-203ENST00000368439 ABCC13Q9NSE7 274 aa19.83■□□□□ 0.77
CKS1B-203ENST00000368439 OLA1Q9NTK5 396 aaKnown RBP19.83■□□□□ 0.77
CKS1B-203ENST00000368439 SFMBT1Q9UHJ3 866 aa19.83■□□□□ 0.77
CKS1B-203ENST00000368439 DNAJC12Q9UKB3 198 aa19.83■□□□□ 0.77
CKS1B-203ENST00000368439 AGO1Q9UL18 857 aaKnown RBP19.83■□□□□ 0.77
CKS1B-203ENST00000368439 SLC8A2Q9UPR5 921 aa19.83■□□□□ 0.77
CKS1B-203ENST00000368439 ZNF510Q9Y2H8 683 aa19.83■□□□□ 0.77
CKS1B-203ENST00000368439 CCDC163A0A0D9SF12 145 aa19.82■□□□□ 0.76
CKS1B-203ENST00000368439 MBD3O95983 291 aa19.82■□□□□ 0.76
CKS1B-203ENST00000368439 FYNP06241 537 aa19.82■□□□□ 0.76
CKS1B-203ENST00000368439 TYRP14679 529 aa19.82■□□□□ 0.76
CKS1B-203ENST00000368439 TNFRSF4P43489 277 aa19.82■□□□□ 0.76
CKS1B-203ENST00000368439 MRPS21P82921 87 aaKnown RBP19.82■□□□□ 0.76
CKS1B-203ENST00000368439 SRSF5Q13243 272 aaKnown RBP19.82■□□□□ 0.76
CKS1B-203ENST00000368439 DMC1Q14565 340 aa19.82■□□□□ 0.76
CKS1B-203ENST00000368439 C2orf27AQ580R0 203 aa19.82■□□□□ 0.76
CKS1B-203ENST00000368439 EMC10Q5UCC4 262 aa19.82■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms