RNA–Protein interactions for RNA: ENST00000367621.1

VTA1-201, Transcript of vesicle trafficking 1, humanhuman

TSL 5 BASIC

Gene VTA1, Length 1,284 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-201ENST00000367621 GPR65Q8IYL9 337 aa9.92□□□□□ -0.82
VTA1-201ENST00000367621 VPS52Q8N1B4 723 aa9.92□□□□□ -0.82
VTA1-201ENST00000367621 STKLD1Q8NE28 680 aa9.92□□□□□ -0.82
VTA1-201ENST00000367621 MNS1Q8NEH6 495 aa9.92□□□□□ -0.82
VTA1-201ENST00000367621 CMASQ8NFW8 434 aaPredicted RBP9.92□□□□□ -0.82
VTA1-201ENST00000367621 EXD1Q8NHP7 514 aa9.92□□□□□ -0.82
VTA1-201ENST00000367621 SPPL2BQ8TCT7 592 aa9.92□□□□□ -0.82
VTA1-201ENST00000367621 FAM172AQ8WUF8 416 aa9.92□□□□□ -0.82
VTA1-201ENST00000367621 AUTS2Q8WXX7 1259 aa9.92□□□□□ -0.82
VTA1-201ENST00000367621 ACSF2Q96CM8 615 aaPredicted RBP9.92□□□□□ -0.82
VTA1-201ENST00000367621 TMEM169Q96HH4 297 aa9.92□□□□□ -0.82
VTA1-201ENST00000367621 RPGRIP1Q96KN7 1286 aa9.92□□□□□ -0.82
VTA1-201ENST00000367621 SLC9A7Q96T83 725 aa9.92□□□□□ -0.82
VTA1-201ENST00000367621 TBCBQ99426 244 aa9.92□□□□□ -0.82
VTA1-201ENST00000367621 NPY6RQ99463 290 aa9.92□□□□□ -0.82
VTA1-201ENST00000367621 ZBP1Q9H171 429 aa9.92□□□□□ -0.82
VTA1-201ENST00000367621 EPC1Q9H2F5 836 aa9.92□□□□□ -0.82
VTA1-201ENST00000367621 RXFP1Q9HBX9 757 aa9.92□□□□□ -0.82
VTA1-201ENST00000367621 LIMD1Q9UGP4 676 aa9.92□□□□□ -0.82
VTA1-201ENST00000367621 NAALADL1Q9UQQ1 740 aa9.92□□□□□ -0.82
VTA1-201ENST00000367621 COL4A4P53420 1690 aaPredicted RBP9.92□□□□□ -0.82
VTA1-201ENST00000367621 TTC24A2A3L6 582 aaPredicted RBP9.91□□□□□ -0.82
VTA1-201ENST00000367621 CARNS1A5YM72 827 aa9.91□□□□□ -0.82
VTA1-201ENST00000367621 PI4K2BG5E9Z4 385 aa9.91□□□□□ -0.82
VTA1-201ENST00000367621 C2CD2LO14523 706 aa9.91□□□□□ -0.82
VTA1-201ENST00000367621 ZBTB24O43167 697 aaPredicted RBP9.91□□□□□ -0.82
VTA1-201ENST00000367621 SART1O43290 800 aaKnown RBP9.91□□□□□ -0.82
VTA1-201ENST00000367621 SEC24AO95486 1093 aa9.91□□□□□ -0.82
VTA1-201ENST00000367621 LTFP02788 710 aa9.91□□□□□ -0.82
VTA1-201ENST00000367621 RARAP10276 462 aa9.91□□□□□ -0.82
VTA1-201ENST00000367621 CPB1P15086 417 aa9.91□□□□□ -0.82
VTA1-201ENST00000367621 ATF6P18850 670 aa9.91□□□□□ -0.82
VTA1-201ENST00000367621 SDC4P31431 198 aa9.91□□□□□ -0.82
VTA1-201ENST00000367621 NOS2P35228 1153 aa9.91□□□□□ -0.82
VTA1-201ENST00000367621 PTPN7P35236 360 aa9.91□□□□□ -0.82
VTA1-201ENST00000367621 PPM1AP35813 382 aa9.91□□□□□ -0.82
VTA1-201ENST00000367621 BMPR1AP36894 532 aa9.91□□□□□ -0.82
VTA1-201ENST00000367621 PAFAH1B1P43034 410 aa9.91□□□□□ -0.82
VTA1-201ENST00000367621 KLF1Q13351 362 aaPredicted RBP9.91□□□□□ -0.82
VTA1-201ENST00000367621 EIF4EBP2Q13542 120 aaPredicted RBP9.91□□□□□ -0.82
VTA1-201ENST00000367621 RAB33AQ14088 237 aa9.91□□□□□ -0.82
VTA1-201ENST00000367621 SLC25A52Q3SY17 297 aa9.91□□□□□ -0.82
VTA1-201ENST00000367621 KCNT1Q5JUK3 1230 aa9.91□□□□□ -0.82
VTA1-201ENST00000367621 FAM109BQ6ICB4 259 aaPredicted RBP9.91□□□□□ -0.82
VTA1-201ENST00000367621 BEND5Q7L4P6 421 aa9.91□□□□□ -0.82
VTA1-201ENST00000367621 SCN4BQ8IWT1 228 aa9.91□□□□□ -0.82
VTA1-201ENST00000367621 RCOR2Q8IZ40 523 aa9.91□□□□□ -0.82
VTA1-201ENST00000367621 PRELID2Q8N945 189 aa9.91□□□□□ -0.82
VTA1-201ENST00000367621 KLHL23Q8NBE8 558 aa9.91□□□□□ -0.82
VTA1-201ENST00000367621 FAM71BQ8TC56 605 aa9.91□□□□□ -0.82
VTA1-201ENST00000367621 GPR152Q8TDT2 470 aa9.91□□□□□ -0.82
VTA1-201ENST00000367621 C2orf15Q8WU43 125 aaKnown RBP9.91□□□□□ -0.82
VTA1-201ENST00000367621 GOLGA1Q92805 767 aa9.91□□□□□ -0.82
VTA1-201ENST00000367621 SPATA17Q96L03 361 aa9.91□□□□□ -0.82
VTA1-201ENST00000367621 SLITRK1Q96PX8 696 aa9.91□□□□□ -0.82
VTA1-201ENST00000367621 AP1M1Q9BXS5 423 aa9.91□□□□□ -0.82
VTA1-201ENST00000367621 MAGEB5Q9BZ81 275 aa9.91□□□□□ -0.82
VTA1-201ENST00000367621 ANKZF1Q9H8Y5 726 aa9.91□□□□□ -0.82
VTA1-201ENST00000367621 ZWILCHQ9H900 591 aa9.91□□□□□ -0.82
VTA1-201ENST00000367621 NMUR1Q9HB89 426 aa9.91□□□□□ -0.82
VTA1-201ENST00000367621 POPDC2Q9HBU9 364 aa9.91□□□□□ -0.82
VTA1-201ENST00000367621 KLHL11Q9NVR0 708 aa9.91□□□□□ -0.82
VTA1-201ENST00000367621 OSER1Q9NX31 292 aa9.91□□□□□ -0.82
VTA1-201ENST00000367621 AFF4Q9UHB7 1163 aaKnown RBP9.91□□□□□ -0.82
VTA1-201ENST00000367621 PCSK1NQ9UHG2 260 aa9.91□□□□□ -0.82
VTA1-201ENST00000367621 USP18Q9UMW8 372 aa9.91□□□□□ -0.82
VTA1-201ENST00000367621 SCML2Q9UQR0 700 aa9.91□□□□□ -0.82
VTA1-201ENST00000367621 PCDHB12Q9Y5F1 795 aa9.91□□□□□ -0.82
VTA1-201ENST00000367621 VWA8A3KMH1 1905 aa9.9□□□□□ -0.82
VTA1-201ENST00000367621 LINC01553A4QN01 128 aa9.9□□□□□ -0.82
VTA1-201ENST00000367621 GRXCR1A8MXD5 290 aa9.9□□□□□ -0.82
VTA1-201ENST00000367621 I6L893 689 aaPredicted RBP9.9□□□□□ -0.82
VTA1-201ENST00000367621 KRIT1O00522 736 aa9.9□□□□□ -0.82
VTA1-201ENST00000367621 TEX28O15482 410 aa9.9□□□□□ -0.82
VTA1-201ENST00000367621 ZRANB2O95218 330 aaKnown RBP eCLIP9.9□□□□□ -0.82
VTA1-201ENST00000367621 IGLV3-25P01717 112 aa9.9□□□□□ -0.82
VTA1-201ENST00000367621 KRT1P04264 644 aa9.9□□□□□ -0.82
VTA1-201ENST00000367621 CD48P09326 243 aa9.9□□□□□ -0.82
VTA1-201ENST00000367621 CTSAP10619 480 aa9.9□□□□□ -0.82
VTA1-201ENST00000367621 MYOGP15173 224 aa9.9□□□□□ -0.82
VTA1-201ENST00000367621 KDELR1P24390 212 aa9.9□□□□□ -0.82
VTA1-201ENST00000367621 IL4RP24394 825 aa9.9□□□□□ -0.82
VTA1-201ENST00000367621 DNAJB1P25685 340 aa9.9□□□□□ -0.82
VTA1-201ENST00000367621 GJC1P36383 396 aa9.9□□□□□ -0.82
VTA1-201ENST00000367621 CDKN2BP42772 138 aa9.9□□□□□ -0.82
VTA1-201ENST00000367621 SSR1P43307 286 aaKnown RBP9.9□□□□□ -0.82
VTA1-201ENST00000367621 MAGEA10P43363 369 aaPredicted RBP9.9□□□□□ -0.82
VTA1-201ENST00000367621 MTMR3Q13615 1198 aa9.9□□□□□ -0.82
VTA1-201ENST00000367621 LLGL1Q15334 1064 aa9.9□□□□□ -0.82
VTA1-201ENST00000367621 ELF2Q15723 593 aa9.9□□□□□ -0.82
VTA1-201ENST00000367621 CA9Q16790 459 aa9.9□□□□□ -0.82
VTA1-201ENST00000367621 CDO1Q16878 200 aa9.9□□□□□ -0.82
VTA1-201ENST00000367621 LONRF2Q1L5Z9 754 aa9.9□□□□□ -0.82
VTA1-201ENST00000367621 DCAF6Q58WW2 860 aa9.9□□□□□ -0.82
VTA1-201ENST00000367621 TEX35Q5T0J7 233 aa9.9□□□□□ -0.82
VTA1-201ENST00000367621 CCDC181Q5TID7 509 aa9.9□□□□□ -0.82
VTA1-201ENST00000367621 BSPRYQ5W0U4 402 aa9.9□□□□□ -0.82
VTA1-201ENST00000367621 TPGS2Q68CL5 300 aa9.9□□□□□ -0.82
VTA1-201ENST00000367621 KIAA1841Q6NSI8 718 aa9.9□□□□□ -0.82
VTA1-201ENST00000367621 SPOCD1Q6ZMY3 1216 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms