RNA–Protein interactions for RNA: ENST00000366766.6

CDC42BPA-203, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5 BASIC

Gene CDC42BPA, Length 10,610 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-203ENST00000366766 DLGAP2Q9P1A6 1054 aa12.39□□□□□ -0.43
CDC42BPA-203ENST00000366766 COPG1Q9Y678 874 aaKnown RBP12.39□□□□□ -0.43
CDC42BPA-203ENST00000366766 GYS1P13807 737 aa12.39□□□□□ -0.43
CDC42BPA-203ENST00000366766 GP5P40197 560 aa12.39□□□□□ -0.43
CDC42BPA-203ENST00000366766 PIK3CGP48736 1102 aa12.39□□□□□ -0.43
CDC42BPA-203ENST00000366766 HPCAP84074 193 aa12.39□□□□□ -0.43
CDC42BPA-203ENST00000366766 RNF180Q86T96 592 aa12.39□□□□□ -0.43
CDC42BPA-203ENST00000366766 ZNF557Q8N988 423 aaPredicted RBP12.39□□□□□ -0.43
CDC42BPA-203ENST00000366766 RNF217Q8TC41 542 aa12.39□□□□□ -0.43
CDC42BPA-203ENST00000366766 C17orf80Q9BSJ5 609 aa12.39□□□□□ -0.43
CDC42BPA-203ENST00000366766 TMEM134Q9H6X4 195 aa12.39□□□□□ -0.43
CDC42BPA-203ENST00000366766 FGRP09769 529 aa12.39□□□□□ -0.43
CDC42BPA-203ENST00000366766 LAMTOR4Q0VGL1 99 aa12.39□□□□□ -0.43
CDC42BPA-203ENST00000366766 KANSL3Q9P2N6 904 aa12.39□□□□□ -0.43
CDC42BPA-203ENST00000366766 ZNF229Q9UJW7 825 aa12.39□□□□□ -0.43
CDC42BPA-203ENST00000366766 NAALADL1Q9UQQ1 740 aa12.39□□□□□ -0.43
CDC42BPA-203ENST00000366766 PYGMP11217 842 aa12.39□□□□□ -0.43
CDC42BPA-203ENST00000366766 SERPINB1P30740 379 aa12.39□□□□□ -0.43
CDC42BPA-203ENST00000366766 NPY2RP49146 381 aa12.39□□□□□ -0.43
CDC42BPA-203ENST00000366766 RAD23AP54725 363 aa12.39□□□□□ -0.43
CDC42BPA-203ENST00000366766 GPR141Q7Z602 305 aa12.39□□□□□ -0.43
CDC42BPA-203ENST00000366766 ZNF606Q8WXB4 792 aa12.39□□□□□ -0.43
CDC42BPA-203ENST00000366766 BDH2Q9BUT1 245 aa12.39□□□□□ -0.43
CDC42BPA-203ENST00000366766 COLEC11Q9BWP8 271 aa12.39□□□□□ -0.43
CDC42BPA-203ENST00000366766 PLA2G6O60733 806 aa12.39□□□□□ -0.43
CDC42BPA-203ENST00000366766 MARSP56192 900 aaKnown RBP12.39□□□□□ -0.43
CDC42BPA-203ENST00000366766 CCDC92Q53HC0 331 aaPredicted RBP12.39□□□□□ -0.43
CDC42BPA-203ENST00000366766 TMCO4Q5TGY1 634 aa12.39□□□□□ -0.43
CDC42BPA-203ENST00000366766 ARFGEF2Q9Y6D5 1785 aa12.39□□□□□ -0.43
CDC42BPA-203ENST00000366766 GSNP06396 782 aa12.39□□□□□ -0.43
CDC42BPA-203ENST00000366766 ITGAVP06756 1048 aa12.39□□□□□ -0.43
CDC42BPA-203ENST00000366766 PKN3Q6P5Z2 889 aa12.39□□□□□ -0.43
CDC42BPA-203ENST00000366766 RAET1EQ8TD07 263 aa12.39□□□□□ -0.43
CDC42BPA-203ENST00000366766 TAAR1Q96RJ0 339 aa12.39□□□□□ -0.43
CDC42BPA-203ENST00000366766 PIDD1Q9HB75 910 aa12.39□□□□□ -0.43
CDC42BPA-203ENST00000366766 LRRC4BQ9NT99 713 aa12.39□□□□□ -0.43
CDC42BPA-203ENST00000366766 SPDYE5A6NIY4 337 aa12.39□□□□□ -0.43
CDC42BPA-203ENST00000366766 F5H5T6 163 aa12.39□□□□□ -0.43
CDC42BPA-203ENST00000366766 PRRG1O14668 218 aa12.39□□□□□ -0.43
CDC42BPA-203ENST00000366766 PSMA3P25788 255 aa12.39□□□□□ -0.43
CDC42BPA-203ENST00000366766 TTKP33981 857 aa12.39□□□□□ -0.43
CDC42BPA-203ENST00000366766 CLK1P49759 484 aaKnown RBP12.39□□□□□ -0.43
CDC42BPA-203ENST00000366766 GMPSP49915 693 aaPredicted RBP12.39□□□□□ -0.43
CDC42BPA-203ENST00000366766 SPDYE7PQ495Y7 208 aa12.39□□□□□ -0.43
CDC42BPA-203ENST00000366766 ARCQ7LC44 396 aa12.39□□□□□ -0.43
CDC42BPA-203ENST00000366766 STRA8Q7Z7C7 330 aa12.39□□□□□ -0.43
CDC42BPA-203ENST00000366766 OSGEPQ9NPF4 335 aa12.39□□□□□ -0.43
CDC42BPA-203ENST00000366766 SH3BP1Q9Y3L3 701 aa12.39□□□□□ -0.43
CDC42BPA-203ENST00000366766 DDHD2O94830 711 aa12.39□□□□□ -0.43
CDC42BPA-203ENST00000366766 THP07101 528 aa12.39□□□□□ -0.43
CDC42BPA-203ENST00000366766 FAM71AQ8IYT1 594 aa12.39□□□□□ -0.43
CDC42BPA-203ENST00000366766 TEKT4Q8WW24 435 aa12.39□□□□□ -0.43
CDC42BPA-203ENST00000366766 PLEKHA8Q96JA3 519 aa12.39□□□□□ -0.43
CDC42BPA-203ENST00000366766 NRDE2Q9H7Z3 1164 aa12.39□□□□□ -0.43
CDC42BPA-203ENST00000366766 PDPK2PQ6A1A2 396 aa12.38□□□□□ -0.43
CDC42BPA-203ENST00000366766 P3H2Q8IVL5 708 aa12.38□□□□□ -0.43
CDC42BPA-203ENST00000366766 CTNNAL1Q9UBT7 734 aa12.38□□□□□ -0.43
CDC42BPA-203ENST00000366766 XRN1Q8IZH2 1706 aaKnown RBP12.38□□□□□ -0.43
CDC42BPA-203ENST00000366766 MROH7Q68CQ1 1323 aa12.38□□□□□ -0.43
CDC42BPA-203ENST00000366766 ZNF839A8K0R7 811 aa12.38□□□□□ -0.43
CDC42BPA-203ENST00000366766 IMPAD1Q9NX62 359 aa12.38□□□□□ -0.43
CDC42BPA-203ENST00000366766 PRPF4O43172 522 aaKnown RBP eCLIP12.38□□□□□ -0.43
CDC42BPA-203ENST00000366766 AQP5P55064 265 aa12.38□□□□□ -0.43
CDC42BPA-203ENST00000366766 ADGRA1Q86SQ6 560 aa12.38□□□□□ -0.43
CDC42BPA-203ENST00000366766 PCSK9Q8NBP7 692 aaKnown RBP12.38□□□□□ -0.43
CDC42BPA-203ENST00000366766 C8orf4Q9NR00 106 aa12.38□□□□□ -0.43
CDC42BPA-203ENST00000366766 RNF112Q9ULX5 631 aa12.38□□□□□ -0.43
CDC42BPA-203ENST00000366766 ADAM28Q9UKQ2 775 aa12.38□□□□□ -0.43
CDC42BPA-203ENST00000366766 SLITRK3O94933 977 aa12.38□□□□□ -0.43
CDC42BPA-203ENST00000366766 CPA3P15088 417 aa12.38□□□□□ -0.43
CDC42BPA-203ENST00000366766 SOX6P35712 828 aa12.38□□□□□ -0.43
CDC42BPA-203ENST00000366766 EPS8Q12929 822 aa12.38□□□□□ -0.43
CDC42BPA-203ENST00000366766 ZC3H12BQ5HYM0 836 aaKnown RBP12.38□□□□□ -0.43
CDC42BPA-203ENST00000366766 C10orf120Q5SQS8 335 aa12.38□□□□□ -0.43
CDC42BPA-203ENST00000366766 LRRC49Q8IUZ0 686 aa12.38□□□□□ -0.43
CDC42BPA-203ENST00000366766 MYPNQ86TC9 1320 aa12.38□□□□□ -0.43
CDC42BPA-203ENST00000366766 TMEM114B3SHH9 223 aa12.38□□□□□ -0.43
CDC42BPA-203ENST00000366766 RHOBTB1O94844 696 aa12.38□□□□□ -0.43
CDC42BPA-203ENST00000366766 SMARCD1Q96GM5 515 aa12.38□□□□□ -0.43
CDC42BPA-203ENST00000366766 SH2D3AQ9BRG2 576 aa12.38□□□□□ -0.43
CDC42BPA-203ENST00000366766 TMEM121Q9BTD3 319 aa12.38□□□□□ -0.43
CDC42BPA-203ENST00000366766 LRRC19Q9H756 370 aa12.38□□□□□ -0.43
CDC42BPA-203ENST00000366766 TRPC7Q9HCX4 862 aa12.38□□□□□ -0.43
CDC42BPA-203ENST00000366766 SUFUQ9UMX1 484 aa12.38□□□□□ -0.43
CDC42BPA-203ENST00000366766 KATNA1O75449 491 aa12.38□□□□□ -0.43
CDC42BPA-203ENST00000366766 BLOC1S4Q9NUP1 217 aa12.38□□□□□ -0.43
CDC42BPA-203ENST00000366766 CRLS1Q9UJA2 301 aa12.38□□□□□ -0.43
CDC42BPA-203ENST00000366766 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.37□□□□□ -0.43
CDC42BPA-203ENST00000366766 FGF10O15520 208 aaPredicted RBP12.37□□□□□ -0.43
CDC42BPA-203ENST00000366766 PCSK2P16519 638 aa12.37□□□□□ -0.43
CDC42BPA-203ENST00000366766 ST3GAL1Q11201 340 aa12.37□□□□□ -0.43
CDC42BPA-203ENST00000366766 MRPL28Q13084 256 aaKnown RBP12.37□□□□□ -0.43
CDC42BPA-203ENST00000366766 ZNF177Q13360 481 aaPredicted RBP12.37□□□□□ -0.43
CDC42BPA-203ENST00000366766 HYIQ5T013 277 aa12.37□□□□□ -0.43
CDC42BPA-203ENST00000366766 GJB7Q6PEY0 223 aa12.37□□□□□ -0.43
CDC42BPA-203ENST00000366766 LRRC55Q6ZSA7 311 aa12.37□□□□□ -0.43
CDC42BPA-203ENST00000366766 TMEM86AQ8N2M4 240 aa12.37□□□□□ -0.43
CDC42BPA-203ENST00000366766 PDCD2LQ9BRP1 358 aa12.37□□□□□ -0.43
CDC42BPA-203ENST00000366766 IL22Q9GZX6 179 aa12.37□□□□□ -0.43
CDC42BPA-203ENST00000366766 CLPBQ9H078 707 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms