RNA–Protein interactions for RNA: ENST00000366216.6

CSNK1E-202, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 1,005 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-202ENST00000366216 SNTG2Q9NY99 539 aa11.87□□□□□ -0.51
CSNK1E-202ENST00000366216 CNTN3Q9P232 1028 aa11.87□□□□□ -0.51
CSNK1E-202ENST00000366216 MTRRQ9UBK8 725 aa11.87□□□□□ -0.51
CSNK1E-202ENST00000366216 PARP2Q9UGN5 583 aa11.87□□□□□ -0.51
CSNK1E-202ENST00000366216 CDC23Q9UJX2 597 aa11.87□□□□□ -0.51
CSNK1E-202ENST00000366216 JRKLQ9Y4A0 524 aa11.87□□□□□ -0.51
CSNK1E-202ENST00000366216 PCDHB4Q9Y5E5 795 aa11.87□□□□□ -0.51
CSNK1E-202ENST00000366216 CAPN6Q9Y6Q1 641 aa11.87□□□□□ -0.51
CSNK1E-202ENST00000366216 CELSR3Q9NYQ7 3312 aa11.87□□□□□ -0.51
CSNK1E-202ENST00000366216 PLXND1Q9Y4D7 1925 aa11.86□□□□□ -0.51
CSNK1E-202ENST00000366216 UQCRHLA0A096LP55 91 aa11.86□□□□□ -0.51
CSNK1E-202ENST00000366216 SLC38A8A6NNN8 435 aa11.86□□□□□ -0.51
CSNK1E-202ENST00000366216 C4orf47A7E2U8 309 aa11.86□□□□□ -0.51
CSNK1E-202ENST00000366216 I3L4J1 428 aa11.86□□□□□ -0.51
CSNK1E-202ENST00000366216 ZNF197O14709 1029 aa11.86□□□□□ -0.51
CSNK1E-202ENST00000366216 SEC24AO95486 1093 aa11.86□□□□□ -0.51
CSNK1E-202ENST00000366216 LRG1P02750 347 aa11.86□□□□□ -0.51
CSNK1E-202ENST00000366216 ITGB3P05106 788 aa11.86□□□□□ -0.51
CSNK1E-202ENST00000366216 UQCRHP07919 91 aa11.86□□□□□ -0.51
CSNK1E-202ENST00000366216 MMEP08473 750 aa11.86□□□□□ -0.51
CSNK1E-202ENST00000366216 P4HA1P13674 534 aa11.86□□□□□ -0.51
CSNK1E-202ENST00000366216 CEACAM1P13688 526 aa11.86□□□□□ -0.51
CSNK1E-202ENST00000366216 PRLRP16471 622 aa11.86□□□□□ -0.51
CSNK1E-202ENST00000366216 FGFR3P22607 806 aa11.86□□□□□ -0.51
CSNK1E-202ENST00000366216 ASPAP45381 313 aa11.86□□□□□ -0.51
CSNK1E-202ENST00000366216 SOX9P48436 509 aa11.86□□□□□ -0.51
CSNK1E-202ENST00000366216 KPNA1P52294 538 aaPredicted RBP11.86□□□□□ -0.51
CSNK1E-202ENST00000366216 RBP5P82980 135 aa11.86□□□□□ -0.51
CSNK1E-202ENST00000366216 AMPD2Q01433 879 aa11.86□□□□□ -0.51
CSNK1E-202ENST00000366216 ZNF667Q5HYK9 610 aa11.86□□□□□ -0.51
CSNK1E-202ENST00000366216 DAB2IPQ5VWQ8 1189 aa11.86□□□□□ -0.51
CSNK1E-202ENST00000366216 SCARA3Q6AZY7 606 aa11.86□□□□□ -0.51
CSNK1E-202ENST00000366216 PPP1R2P3Q6NXS1 205 aa11.86□□□□□ -0.51
CSNK1E-202ENST00000366216 PKN3Q6P5Z2 889 aa11.86□□□□□ -0.51
CSNK1E-202ENST00000366216 TRIM72Q6ZMU5 477 aa11.86□□□□□ -0.51
CSNK1E-202ENST00000366216 MFSD6LQ8IWD5 586 aa11.86□□□□□ -0.51
CSNK1E-202ENST00000366216 RBBP8NLQ8NC74 664 aaPredicted RBP11.86□□□□□ -0.51
CSNK1E-202ENST00000366216 C3orf58Q8NDZ4 430 aa11.86□□□□□ -0.51
CSNK1E-202ENST00000366216 ELMO3Q96BJ8 720 aa11.86□□□□□ -0.51
CSNK1E-202ENST00000366216 ZC3H10Q96K80 434 aaKnown RBP11.86□□□□□ -0.51
CSNK1E-202ENST00000366216 PCDHB18PQ96TA0 734 aa11.86□□□□□ -0.51
CSNK1E-202ENST00000366216 CYP3A43Q9HB55 503 aa11.86□□□□□ -0.51
CSNK1E-202ENST00000366216 SEPT11Q9NVA2 429 aaKnown RBP11.86□□□□□ -0.51
CSNK1E-202ENST00000366216 DPP3Q9NY33 737 aa11.86□□□□□ -0.51
CSNK1E-202ENST00000366216 APC2O95996 2303 aa11.85□□□□□ -0.51
CSNK1E-202ENST00000366216 CCDC163A0A0D9SF12 145 aa11.85□□□□□ -0.51
CSNK1E-202ENST00000366216 XPOTO43592 962 aaKnown RBP11.85□□□□□ -0.51
CSNK1E-202ENST00000366216 RECQL4O94761 1208 aa11.85□□□□□ -0.51
CSNK1E-202ENST00000366216 ZIC2O95409 532 aaPredicted RBP11.85□□□□□ -0.51
CSNK1E-202ENST00000366216 FTLP02792 175 aaPredicted RBP11.85□□□□□ -0.51
CSNK1E-202ENST00000366216 KRT19P08727 400 aa11.85□□□□□ -0.51
CSNK1E-202ENST00000366216 KCNE1P15382 129 aa11.85□□□□□ -0.51
CSNK1E-202ENST00000366216 GJA1P17302 382 aa11.85□□□□□ -0.51
CSNK1E-202ENST00000366216 TKTP29401 623 aaKnown RBP11.85□□□□□ -0.51
CSNK1E-202ENST00000366216 HADHBP55084 474 aaKnown RBP11.85□□□□□ -0.51
CSNK1E-202ENST00000366216 NAP1L1P55209 391 aaKnown RBP11.85□□□□□ -0.51
CSNK1E-202ENST00000366216 CCINQ13939 588 aa11.85□□□□□ -0.51
CSNK1E-202ENST00000366216 WHAMMP3Q1A5X7 153 aa11.85□□□□□ -0.51
CSNK1E-202ENST00000366216 SOWAHCQ53LP3 525 aaPredicted RBP11.85□□□□□ -0.51
CSNK1E-202ENST00000366216 TAF3Q5VWG9 929 aa11.85□□□□□ -0.51
CSNK1E-202ENST00000366216 TMEM270Q6UE05 265 aa11.85□□□□□ -0.51
CSNK1E-202ENST00000366216 TTC39CQ8N584 583 aa11.85□□□□□ -0.51
CSNK1E-202ENST00000366216 BEST2Q8NFU1 509 aa11.85□□□□□ -0.51
CSNK1E-202ENST00000366216 CTNNBL1Q8WYA6 563 aaPredicted RBP11.85□□□□□ -0.51
CSNK1E-202ENST00000366216 RFFLQ8WZ73 363 aa11.85□□□□□ -0.51
CSNK1E-202ENST00000366216 DDX27Q96GQ7 796 aaKnown RBP11.85□□□□□ -0.51
CSNK1E-202ENST00000366216 LRRC3BQ96PB8 259 aa11.85□□□□□ -0.51
CSNK1E-202ENST00000366216 C8orf33Q9H7E9 229 aaPredicted RBP11.85□□□□□ -0.51
CSNK1E-202ENST00000366216 TRPV4Q9HBA0 871 aa11.85□□□□□ -0.51
CSNK1E-202ENST00000366216 CISHQ9NSE2 258 aa11.85□□□□□ -0.51
CSNK1E-202ENST00000366216 POLR3BQ9NW08 1133 aaPredicted RBP11.85□□□□□ -0.51
CSNK1E-202ENST00000366216 TAS2R14Q9NYV8 317 aa11.85□□□□□ -0.51
CSNK1E-202ENST00000366216 UBQLN1Q9UMX0 589 aaKnown RBP11.85□□□□□ -0.51
CSNK1E-202ENST00000366216 NEUROG3Q9Y4Z2 214 aa11.85□□□□□ -0.51
CSNK1E-202ENST00000366216 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.85□□□□□ -0.51
CSNK1E-202ENST00000366216 BACE2Q9Y5Z0 518 aa11.85□□□□□ -0.51
CSNK1E-202ENST00000366216 TENM4Q6N022 2769 aa11.85□□□□□ -0.51
CSNK1E-202ENST00000366216 HEPACAM2A8MVW5 462 aa11.84□□□□□ -0.51
CSNK1E-202ENST00000366216 SPECC1L-ADORA2AF8WAN1 911 aa11.84□□□□□ -0.51
CSNK1E-202ENST00000366216 PRRG1O14668 218 aa11.84□□□□□ -0.51
CSNK1E-202ENST00000366216 BUB1O43683 1085 aa11.84□□□□□ -0.51
CSNK1E-202ENST00000366216 CLSTN1O94985 981 aa11.84□□□□□ -0.51
CSNK1E-202ENST00000366216 CYP1A1P04798 512 aaPredicted RBP11.84□□□□□ -0.51
CSNK1E-202ENST00000366216 ATP1A1P05023 1023 aaKnown RBP11.84□□□□□ -0.51
CSNK1E-202ENST00000366216 UNGP13051 313 aaPredicted RBP11.84□□□□□ -0.51
CSNK1E-202ENST00000366216 CYP3A5P20815 502 aa11.84□□□□□ -0.51
CSNK1E-202ENST00000366216 CSRP1P21291 193 aaKnown RBP11.84□□□□□ -0.51
CSNK1E-202ENST00000366216 GNA15P30679 374 aa11.84□□□□□ -0.51
CSNK1E-202ENST00000366216 POLR2BP30876 1174 aaKnown RBP11.84□□□□□ -0.51
CSNK1E-202ENST00000366216 CTHP32929 405 aa11.84□□□□□ -0.51
CSNK1E-202ENST00000366216 PXNP49023 591 aaPredicted RBP11.84□□□□□ -0.51
CSNK1E-202ENST00000366216 CLEC16AQ2KHT3 1053 aa11.84□□□□□ -0.51
CSNK1E-202ENST00000366216 CYP4A22Q5TCH4 519 aa11.84□□□□□ -0.51
CSNK1E-202ENST00000366216 ACAD10Q6JQN1 1059 aa11.84□□□□□ -0.51
CSNK1E-202ENST00000366216 PDZD4Q76G19 769 aaPredicted RBP11.84□□□□□ -0.51
CSNK1E-202ENST00000366216 SLFN11Q7Z7L1 901 aa11.84□□□□□ -0.51
CSNK1E-202ENST00000366216 RALGPS2Q86X27 583 aaPredicted RBP11.84□□□□□ -0.51
CSNK1E-202ENST00000366216 RHOT2Q8IXI1 618 aa11.84□□□□□ -0.51
CSNK1E-202ENST00000366216 SYNPOQ8N3V7 929 aa11.84□□□□□ -0.51
CSNK1E-202ENST00000366216 LRRC52Q8N7C0 313 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms