RNA–Protein interactions for RNA: ENST00000361339.9

IFT140-201, Transcript of intraflagellar transport 140, humanhuman

TSL 1 (best) BASIC

Gene IFT140, Length 2,987 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140-201ENST00000361339 RELL1Q8IUW5 271 aa16.8■□□□□ 0.28
IFT140-201ENST00000361339 KLHL23Q8NBE8 558 aa16.8■□□□□ 0.28
IFT140-201ENST00000361339 FBXO36Q8NEA4 188 aa16.8■□□□□ 0.28
IFT140-201ENST00000361339 SHKBP1Q8TBC3 707 aa16.8■□□□□ 0.28
IFT140-201ENST00000361339 PTPRN2Q92932 1015 aa16.8■□□□□ 0.28
IFT140-201ENST00000361339 NSL1Q96IY1 281 aa16.8■□□□□ 0.28
IFT140-201ENST00000361339 PCDH9Q9HC56 1237 aa16.8■□□□□ 0.28
IFT140-201ENST00000361339 USP18Q9UMW8 372 aa16.8■□□□□ 0.28
IFT140-201ENST00000361339 CHMP2BQ9UQN3 213 aa16.8■□□□□ 0.28
IFT140-201ENST00000361339 ALOX15BO15296 676 aa16.8■□□□□ 0.28
IFT140-201ENST00000361339 HBP1O60381 514 aa16.8■□□□□ 0.28
IFT140-201ENST00000361339 PFDN1O60925 122 aa16.8■□□□□ 0.28
IFT140-201ENST00000361339 GSTA2P09210 222 aa16.8■□□□□ 0.28
IFT140-201ENST00000361339 KITP10721 976 aa16.8■□□□□ 0.28
IFT140-201ENST00000361339 ARFIP2P53365 341 aa16.8■□□□□ 0.28
IFT140-201ENST00000361339 USP46P62068 366 aa16.8■□□□□ 0.28
IFT140-201ENST00000361339 MORF4L2Q15014 288 aa16.8■□□□□ 0.28
IFT140-201ENST00000361339 CA9Q16790 459 aa16.8■□□□□ 0.28
IFT140-201ENST00000361339 LARP7Q4G0J3 582 aaKnown RBP eCLIP16.8■□□□□ 0.28
IFT140-201ENST00000361339 OR6B2Q6IFH4 312 aa16.8■□□□□ 0.28
IFT140-201ENST00000361339 MAMDC4Q6UXC1 1216 aa16.8■□□□□ 0.28
IFT140-201ENST00000361339 FAM183BPQ6ZVS7 135 aa16.8■□□□□ 0.28
IFT140-201ENST00000361339 RIBC1Q8N443 379 aaPredicted RBP16.8■□□□□ 0.28
IFT140-201ENST00000361339 ABTB1Q969K4 478 aaPredicted RBP16.8■□□□□ 0.28
IFT140-201ENST00000361339 TTC17Q96AE7 1141 aa16.8■□□□□ 0.28
IFT140-201ENST00000361339 ADPGKQ9BRR6 497 aa16.8■□□□□ 0.28
IFT140-201ENST00000361339 GJD2Q9UKL4 321 aa16.8■□□□□ 0.28
IFT140-201ENST00000361339 DRG1Q9Y295 367 aaKnown RBP16.8■□□□□ 0.28
IFT140-201ENST00000361339 KAT6AQ92794 2004 aa16.8■□□□□ 0.28
IFT140-201ENST00000361339 B2RBV5 119 aa16.8■□□□□ 0.28
IFT140-201ENST00000361339 F5H423 210 aaPredicted RBP16.8■□□□□ 0.28
IFT140-201ENST00000361339 RBP3P10745 1247 aa16.8■□□□□ 0.28
IFT140-201ENST00000361339 EIF3EP60228 445 aaKnown RBP16.8■□□□□ 0.28
IFT140-201ENST00000361339 CTC1Q2NKJ3 1217 aa16.8■□□□□ 0.28
IFT140-201ENST00000361339 SCYL2Q6P3W7 929 aa16.8■□□□□ 0.28
IFT140-201ENST00000361339 SPATA18Q8TC71 538 aa16.8■□□□□ 0.28
IFT140-201ENST00000361339 DENND1AQ8TEH3 1009 aa16.8■□□□□ 0.28
IFT140-201ENST00000361339 NLRP7Q8WX94 980 aa16.8■□□□□ 0.28
IFT140-201ENST00000361339 RXFP2Q8WXD0 754 aa16.8■□□□□ 0.28
IFT140-201ENST00000361339 RSAD2Q8WXG1 361 aa16.8■□□□□ 0.28
IFT140-201ENST00000361339 DMAP1Q9NPF5 467 aaPredicted RBP16.8■□□□□ 0.28
IFT140-201ENST00000361339 ADARB2Q9NS39 739 aaKnown RBP16.8■□□□□ 0.28
IFT140-201ENST00000361339 DDX56Q9NY93 547 aaKnown RBP16.8■□□□□ 0.28
IFT140-201ENST00000361339 TRUB2O95900 331 aaKnown RBP16.79■□□□□ 0.28
IFT140-201ENST00000361339 PFKMP08237 780 aa16.79■□□□□ 0.28
IFT140-201ENST00000361339 CDH6P55285 790 aa16.79■□□□□ 0.28
IFT140-201ENST00000361339 OCRLQ01968 901 aa16.79■□□□□ 0.28
IFT140-201ENST00000361339 LMNB2Q03252 620 aa16.79■□□□□ 0.28
IFT140-201ENST00000361339 AP1B1Q10567 949 aa16.79■□□□□ 0.28
IFT140-201ENST00000361339 SLC45A4Q5BKX6 768 aa16.79■□□□□ 0.28
IFT140-201ENST00000361339 C3orf62Q6ZUJ4 267 aa16.79■□□□□ 0.28
IFT140-201ENST00000361339 BBS12Q6ZW61 710 aa16.79■□□□□ 0.28
IFT140-201ENST00000361339 ALYREFQ86V81 257 aaKnown RBP16.79■□□□□ 0.28
IFT140-201ENST00000361339 NAT8LQ8N9F0 302 aa16.79■□□□□ 0.28
IFT140-201ENST00000361339 THTPAQ9BU02 230 aa16.79■□□□□ 0.28
IFT140-201ENST00000361339 SPATA16Q9BXB7 569 aa16.79■□□□□ 0.28
IFT140-201ENST00000361339 RABGEF1Q9UJ41 708 aa16.79■□□□□ 0.28
IFT140-201ENST00000361339 TSPAN16Q9UKR8 245 aa16.79■□□□□ 0.28
IFT140-201ENST00000361339 GABBR2O75899 941 aa16.79■□□□□ 0.28
IFT140-201ENST00000361339 INHBCP55103 352 aa16.79■□□□□ 0.28
IFT140-201ENST00000361339 KIZQ2M2Z5 673 aa16.79■□□□□ 0.28
IFT140-201ENST00000361339 CENPUQ71F23 418 aa16.79■□□□□ 0.28
IFT140-201ENST00000361339 TCP10LQ8TDR4 215 aa16.79■□□□□ 0.28
IFT140-201ENST00000361339 CLEC4CQ8WTT0 213 aa16.79■□□□□ 0.28
IFT140-201ENST00000361339 SNRNP27Q8WVK2 155 aaKnown RBP16.79■□□□□ 0.28
IFT140-201ENST00000361339 MRPL45Q9BRJ2 306 aaKnown RBP16.79■□□□□ 0.28
IFT140-201ENST00000361339 TMEM120AQ9BXJ8 343 aa16.79■□□□□ 0.28
IFT140-201ENST00000361339 LHX5Q9H2C1 402 aa16.79■□□□□ 0.28
IFT140-201ENST00000361339 ERAP1Q9NZ08 941 aa16.79■□□□□ 0.28
IFT140-201ENST00000361339 MARCOQ9UEW3 520 aaPredicted RBP16.79■□□□□ 0.28
IFT140-201ENST00000361339 TTLL4Q14679 1199 aa16.78■□□□□ 0.28
IFT140-201ENST00000361339 TAPT1Q6NXT6 567 aa16.78■□□□□ 0.28
IFT140-201ENST00000361339 ACOT1Q86TX2 421 aa16.78■□□□□ 0.28
IFT140-201ENST00000361339 SCUBE3Q8IX30 993 aa16.78■□□□□ 0.28
IFT140-201ENST00000361339 PYROXD1Q8WU10 500 aa16.78■□□□□ 0.28
IFT140-201ENST00000361339 ZMAT2Q96NC0 199 aaKnown RBP16.78■□□□□ 0.28
IFT140-201ENST00000361339 CDHR5Q9HBB8 845 aa16.78■□□□□ 0.28
IFT140-201ENST00000361339 DNAAF2Q9NVR5 837 aaKnown RBP16.78■□□□□ 0.28
IFT140-201ENST00000361339 XPO7Q9UIA9 1087 aaKnown RBP16.78■□□□□ 0.28
IFT140-201ENST00000361339 STRIP2Q9ULQ0 834 aa16.78■□□□□ 0.28
IFT140-201ENST00000361339 SCN1AP35498 2009 aa16.78■□□□□ 0.28
IFT140-201ENST00000361339 C2CD2LO14523 706 aa16.78■□□□□ 0.28
IFT140-201ENST00000361339 RNASEH1O60930 286 aaKnown RBP16.78■□□□□ 0.28
IFT140-201ENST00000361339 FAM155BO75949 473 aa16.78■□□□□ 0.28
IFT140-201ENST00000361339 PGM3O95394 542 aa16.78■□□□□ 0.28
IFT140-201ENST00000361339 ABHD2P08910 425 aa16.78■□□□□ 0.28
IFT140-201ENST00000361339 SURF1Q15526 300 aa16.78■□□□□ 0.28
IFT140-201ENST00000361339 PPP1R26Q5T8A7 1209 aaPredicted RBP16.78■□□□□ 0.28
IFT140-201ENST00000361339 PMF1Q6P1K2 205 aa16.78■□□□□ 0.28
IFT140-201ENST00000361339 CEP128Q6ZU80 1094 aa16.78■□□□□ 0.28
IFT140-201ENST00000361339 ANKRD13AQ8IZ07 590 aa16.78■□□□□ 0.28
IFT140-201ENST00000361339 MIS12Q9H081 205 aa16.78■□□□□ 0.28
IFT140-201ENST00000361339 VCX3BQ9H321 246 aa16.78■□□□□ 0.28
IFT140-201ENST00000361339 VCX3AQ9NNX9 186 aa16.78■□□□□ 0.28
IFT140-201ENST00000361339 PDP2Q9P2J9 529 aa16.78■□□□□ 0.28
IFT140-201ENST00000361339 HEY1Q9Y5J3 304 aa16.78■□□□□ 0.28
IFT140-201ENST00000361339 TRIP11Q15643 1979 aa16.78■□□□□ 0.28
IFT140-201ENST00000361339 FAM237BA0A1B0GVD1 139 aa16.77■□□□□ 0.28
IFT140-201ENST00000361339 SLC25A27O95847 323 aa16.77■□□□□ 0.28
IFT140-201ENST00000361339 PDGFRAP16234 1089 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms