RNA–Protein interactions for RNA: ENST00000361138.6

SMC5-201, Transcript of structural maintenance of chromosomes 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC5, Length 5,980 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-201ENST00000361138 ARHGEF3Q9NR81 526 aa14.36□□□□□ -0.11
SMC5-201ENST00000361138 GJB6O95452 261 aa14.36□□□□□ -0.11
SMC5-201ENST00000361138 ADRA2BP18089 450 aa14.36□□□□□ -0.11
SMC5-201ENST00000361138 NFYCQ13952 458 aa14.36□□□□□ -0.11
SMC5-201ENST00000361138 NRF1Q16656 503 aa14.36□□□□□ -0.11
SMC5-201ENST00000361138 SHCBP1Q8NEM2 672 aa14.36□□□□□ -0.11
SMC5-201ENST00000361138 CNPY3Q9BT09 278 aa14.36□□□□□ -0.11
SMC5-201ENST00000361138 SLC13A4Q9UKG4 626 aa14.36□□□□□ -0.11
SMC5-201ENST00000361138 IQCA1LA6NCM1 817 aa14.36□□□□□ -0.11
SMC5-201ENST00000361138 MAFGO15525 162 aa14.36□□□□□ -0.11
SMC5-201ENST00000361138 MMP10P09238 476 aa14.36□□□□□ -0.11
SMC5-201ENST00000361138 DCAF6Q58WW2 860 aa14.36□□□□□ -0.11
SMC5-201ENST00000361138 TAF2Q6P1X5 1199 aa14.36□□□□□ -0.11
SMC5-201ENST00000361138 APTXQ7Z2E3 356 aaKnown RBP14.36□□□□□ -0.11
SMC5-201ENST00000361138 RNF148Q8N7C7 305 aa14.36□□□□□ -0.11
SMC5-201ENST00000361138 ALG3Q92685 438 aa14.36□□□□□ -0.11
SMC5-201ENST00000361138 DCPSQ96C86 337 aaKnown RBP14.36□□□□□ -0.11
SMC5-201ENST00000361138 DGCR14Q96DF8 476 aaKnown RBP14.36□□□□□ -0.11
SMC5-201ENST00000361138 TAAR1Q96RJ0 339 aa14.36□□□□□ -0.11
SMC5-201ENST00000361138 CASS4Q9NQ75 786 aa14.36□□□□□ -0.11
SMC5-201ENST00000361138 FBXO6Q9NRD1 293 aaPredicted RBP14.36□□□□□ -0.11
SMC5-201ENST00000361138 CISHQ9NSE2 258 aa14.36□□□□□ -0.11
SMC5-201ENST00000361138 C6orf203Q9P0P8 240 aaPredicted RBP14.36□□□□□ -0.11
SMC5-201ENST00000361138 A0A1W2PPM1 405 aa14.35□□□□□ -0.11
SMC5-201ENST00000361138 SERPINI2O75830 405 aa14.35□□□□□ -0.11
SMC5-201ENST00000361138 SLC10A5Q5PT55 438 aa14.35□□□□□ -0.11
SMC5-201ENST00000361138 ZSWIM2Q8NEG5 633 aa14.35□□□□□ -0.11
SMC5-201ENST00000361138 SLC7A14Q8TBB6 771 aa14.35□□□□□ -0.11
SMC5-201ENST00000361138 MMTAG2Q9BU76 263 aaKnown RBP14.35□□□□□ -0.11
SMC5-201ENST00000361138 TRPC7Q9HCX4 862 aa14.35□□□□□ -0.11
SMC5-201ENST00000361138 CD274Q9NZQ7 290 aa14.35□□□□□ -0.11
SMC5-201ENST00000361138 SLIT3O75094 1523 aa14.35□□□□□ -0.11
SMC5-201ENST00000361138 RICTORQ6R327 1708 aa14.35□□□□□ -0.11
SMC5-201ENST00000361138 PHGDHO43175 533 aaKnown RBP14.35□□□□□ -0.11
SMC5-201ENST00000361138 FESP07332 822 aa14.35□□□□□ -0.11
SMC5-201ENST00000361138 PDGFRBP09619 1106 aa14.35□□□□□ -0.11
SMC5-201ENST00000361138 HLA-DPA1P20036 260 aa14.35□□□□□ -0.11
SMC5-201ENST00000361138 PRKAA2P54646 552 aa14.35□□□□□ -0.11
SMC5-201ENST00000361138 TRAF2Q12933 501 aa14.35□□□□□ -0.11
SMC5-201ENST00000361138 NAB1Q13506 487 aa14.35□□□□□ -0.11
SMC5-201ENST00000361138 PRMT9Q6P2P2 845 aa14.35□□□□□ -0.11
SMC5-201ENST00000361138 INTS5Q6P9B9 1019 aaKnown RBP14.35□□□□□ -0.11
SMC5-201ENST00000361138 OTOP1Q7RTM1 612 aa14.35□□□□□ -0.11
SMC5-201ENST00000361138 EZH1Q92800 747 aaPredicted RBP14.35□□□□□ -0.11
SMC5-201ENST00000361138 MAGED4Q96JG8 741 aa14.35□□□□□ -0.11
SMC5-201ENST00000361138 C1orf50Q9BV19 199 aa14.35□□□□□ -0.11
SMC5-201ENST00000361138 TEX12Q9BXU0 123 aa14.35□□□□□ -0.11
SMC5-201ENST00000361138 UBE2OQ9C0C9 1292 aaKnown RBP14.35□□□□□ -0.11
SMC5-201ENST00000361138 NDFIP2Q9NV92 336 aa14.35□□□□□ -0.11
SMC5-201ENST00000361138 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP14.35□□□□□ -0.11
SMC5-201ENST00000361138 CROTQ9UKG9 612 aa14.35□□□□□ -0.11
SMC5-201ENST00000361138 MYO1DO94832 1006 aa14.35□□□□□ -0.11
SMC5-201ENST00000361138 SUPT7LO94864 414 aa14.35□□□□□ -0.11
SMC5-201ENST00000361138 VDRP11473 427 aa14.35□□□□□ -0.11
SMC5-201ENST00000361138 COX4I1P13073 169 aa14.35□□□□□ -0.11
SMC5-201ENST00000361138 RUNX1T1Q06455 604 aa14.35□□□□□ -0.11
SMC5-201ENST00000361138 CLNKQ7Z7G1 428 aa14.35□□□□□ -0.11
SMC5-201ENST00000361138 WDR49Q8IV35 697 aa14.35□□□□□ -0.11
SMC5-201ENST00000361138 P3H2Q8IVL5 708 aa14.35□□□□□ -0.11
SMC5-201ENST00000361138 LPAR1Q92633 364 aa14.35□□□□□ -0.11
SMC5-201ENST00000361138 HAS1Q92839 578 aa14.35□□□□□ -0.11
SMC5-201ENST00000361138 TUBGCP3Q96CW5 907 aa14.35□□□□□ -0.11
SMC5-201ENST00000361138 CRAMP1Q96RY5 1269 aa14.35□□□□□ -0.11
SMC5-201ENST00000361138 UTP6Q9NYH9 597 aaKnown RBP14.35□□□□□ -0.11
SMC5-201ENST00000361138 NCKIPSDQ9NZQ3 722 aa14.35□□□□□ -0.11
SMC5-201ENST00000361138 SPATA31A1Q5TZJ5 1347 aa14.35□□□□□ -0.11
SMC5-201ENST00000361138 ASNA1O43681 348 aa14.35□□□□□ -0.11
SMC5-201ENST00000361138 CDK7P50613 346 aa14.35□□□□□ -0.11
SMC5-201ENST00000361138 PKNOX1P55347 436 aa14.35□□□□□ -0.11
SMC5-201ENST00000361138 TSPY1Q01534 308 aa14.35□□□□□ -0.11
SMC5-201ENST00000361138 FUT2Q10981 343 aa14.35□□□□□ -0.11
SMC5-201ENST00000361138 MAMLD1Q13495 774 aa14.35□□□□□ -0.11
SMC5-201ENST00000361138 LAMC2Q13753 1193 aa14.35□□□□□ -0.11
SMC5-201ENST00000361138 MAB21L3Q8N8X9 362 aa14.35□□□□□ -0.11
SMC5-201ENST00000361138 COLGALT1Q8NBJ5 622 aa14.35□□□□□ -0.11
SMC5-201ENST00000361138 KCNMB3Q9NPA1 279 aa14.35□□□□□ -0.11
SMC5-201ENST00000361138 HNRNPCL2B2RXH8 293 aa14.35□□□□□ -0.11
SMC5-201ENST00000361138 CLOCKO15516 846 aa14.35□□□□□ -0.11
SMC5-201ENST00000361138 CHRNB3Q05901 458 aa14.35□□□□□ -0.11
SMC5-201ENST00000361138 TTLL4Q14679 1199 aa14.35□□□□□ -0.11
SMC5-201ENST00000361138 SPDYAQ5MJ70 313 aa14.35□□□□□ -0.11
SMC5-201ENST00000361138 PIWIL2Q8TC59 973 aaKnown RBP14.35□□□□□ -0.11
SMC5-201ENST00000361138 AGO4Q9HCK5 861 aaKnown RBP14.35□□□□□ -0.11
SMC5-201ENST00000361138 TMCO1Q9UM00 188 aa14.35□□□□□ -0.11
SMC5-201ENST00000361138 TPP1O14773 563 aa14.34□□□□□ -0.11
SMC5-201ENST00000361138 CHADO15335 359 aa14.34□□□□□ -0.11
SMC5-201ENST00000361138 ADCY6O43306 1168 aa14.34□□□□□ -0.11
SMC5-201ENST00000361138 TRIM13O60858 407 aa14.34□□□□□ -0.11
SMC5-201ENST00000361138 FKBP9O95302 570 aa14.34□□□□□ -0.11
SMC5-201ENST00000361138 FGFR3P22607 806 aa14.34□□□□□ -0.11
SMC5-201ENST00000361138 GLRA2P23416 452 aa14.34□□□□□ -0.11
SMC5-201ENST00000361138 CYP2F1P24903 491 aa14.34□□□□□ -0.11
SMC5-201ENST00000361138 PPP3CAQ08209 521 aa14.34□□□□□ -0.11
SMC5-201ENST00000361138 SPP2Q13103 211 aa14.34□□□□□ -0.11
SMC5-201ENST00000361138 MTMR2Q13614 643 aa14.34□□□□□ -0.11
SMC5-201ENST00000361138 ZNF235Q14590 738 aa14.34□□□□□ -0.11
SMC5-201ENST00000361138 BTBD8Q5XKL5 378 aa14.34□□□□□ -0.11
SMC5-201ENST00000361138 FKBP9P1Q75LS8 142 aa14.34□□□□□ -0.11
SMC5-201ENST00000361138 FAM71AQ8IYT1 594 aa14.34□□□□□ -0.11
SMC5-201ENST00000361138 AP5M1Q9H0R1 490 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms