RNA–Protein interactions for RNA: ENST00000359541.6

GTF3C2-202, Transcript of general transcription factor IIIC subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF3C2, Length 3,992 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C2-202ENST00000359541 MED10Q9BTT4 135 aa9.65□□□□□ -0.86
GTF3C2-202ENST00000359541 GEMIN8Q9NWZ8 242 aaKnown RBP9.65□□□□□ -0.86
GTF3C2-202ENST00000359541 MAP1BP46821 2468 aaKnown RBP9.65□□□□□ -0.86
GTF3C2-202ENST00000359541 SLC15A5A6NIM6 579 aa9.65□□□□□ -0.86
GTF3C2-202ENST00000359541 BTBD19C9JJ37 291 aa9.65□□□□□ -0.86
GTF3C2-202ENST00000359541 GOLGA8RI6L899 631 aa9.65□□□□□ -0.86
GTF3C2-202ENST00000359541 PDGFRBP09619 1106 aa9.65□□□□□ -0.86
GTF3C2-202ENST00000359541 CPT1AP50416 773 aa9.65□□□□□ -0.86
GTF3C2-202ENST00000359541 FAM110CQ1W6H9 321 aa9.65□□□□□ -0.86
GTF3C2-202ENST00000359541 KBTBD12Q3ZCT8 623 aa9.65□□□□□ -0.86
GTF3C2-202ENST00000359541 GALNTL6Q49A17 601 aa9.65□□□□□ -0.86
GTF3C2-202ENST00000359541 CASC4Q6P4E1 433 aa9.65□□□□□ -0.86
GTF3C2-202ENST00000359541 STRADAQ7RTN6 431 aa9.65□□□□□ -0.86
GTF3C2-202ENST00000359541 FITM2Q8N6M3 262 aa9.65□□□□□ -0.86
GTF3C2-202ENST00000359541 TFB1MQ8WVM0 346 aaKnown RBP9.65□□□□□ -0.86
GTF3C2-202ENST00000359541 RTP4Q96DX8 246 aa9.65□□□□□ -0.86
GTF3C2-202ENST00000359541 ADAM33Q9BZ11 813 aa9.65□□□□□ -0.86
GTF3C2-202ENST00000359541 CNTN3Q9P232 1028 aa9.65□□□□□ -0.86
GTF3C2-202ENST00000359541 RCOR3Q9P2K3 495 aaPredicted RBP9.65□□□□□ -0.86
GTF3C2-202ENST00000359541 TUBGCP4Q9UGJ1 667 aa9.65□□□□□ -0.86
GTF3C2-202ENST00000359541 PPP1R12AO14974 1030 aaPredicted RBP9.65□□□□□ -0.86
GTF3C2-202ENST00000359541 PAPSS1O43252 624 aaPredicted RBP9.65□□□□□ -0.86
GTF3C2-202ENST00000359541 SNAI1O95863 264 aaPredicted RBP9.65□□□□□ -0.86
GTF3C2-202ENST00000359541 SMIM10L2AP0DMW4 78 aa9.65□□□□□ -0.86
GTF3C2-202ENST00000359541 SMIM10L2BP0DMW5 78 aa9.65□□□□□ -0.86
GTF3C2-202ENST00000359541 ADRA1DP25100 572 aa9.65□□□□□ -0.86
GTF3C2-202ENST00000359541 CNTFP26441 200 aa9.65□□□□□ -0.86
GTF3C2-202ENST00000359541 SULT1E1P49888 294 aa9.65□□□□□ -0.86
GTF3C2-202ENST00000359541 FKBP1BP68106 108 aa9.65□□□□□ -0.86
GTF3C2-202ENST00000359541 CDK16Q00536 496 aa9.65□□□□□ -0.86
GTF3C2-202ENST00000359541 GRB14Q14449 540 aa9.65□□□□□ -0.86
GTF3C2-202ENST00000359541 SLC1A5Q15758 541 aa9.65□□□□□ -0.86
GTF3C2-202ENST00000359541 DPYSL2Q16555 572 aa9.65□□□□□ -0.86
GTF3C2-202ENST00000359541 CCDC142Q17RM4 750 aa9.65□□□□□ -0.86
GTF3C2-202ENST00000359541 MSS51Q4VC12 460 aa9.65□□□□□ -0.86
GTF3C2-202ENST00000359541 SH3PXD2AQ5TCZ1 1133 aa9.65□□□□□ -0.86
GTF3C2-202ENST00000359541 ECHDC2Q86YB7 292 aa9.65□□□□□ -0.86
GTF3C2-202ENST00000359541 CCNJLQ8IV13 435 aa9.65□□□□□ -0.86
GTF3C2-202ENST00000359541 PSTKQ8IV42 348 aaKnown RBP9.65□□□□□ -0.86
GTF3C2-202ENST00000359541 ADGRF2Q8IZF7 708 aa9.65□□□□□ -0.86
GTF3C2-202ENST00000359541 DEPDC1BQ8WUY9 529 aa9.65□□□□□ -0.86
GTF3C2-202ENST00000359541 DHRS4Q9BTZ2 278 aa9.65□□□□□ -0.86
GTF3C2-202ENST00000359541 PNPLA8Q9NP80 782 aa9.65□□□□□ -0.86
GTF3C2-202ENST00000359541 ZNF180Q9UJW8 692 aa9.65□□□□□ -0.86
GTF3C2-202ENST00000359541 DICER1Q9UPY3 1922 aaKnown RBP9.65□□□□□ -0.87
GTF3C2-202ENST00000359541 LRRC37A2A6NM11 1700 aa9.65□□□□□ -0.87
GTF3C2-202ENST00000359541 CAPN9O14815 690 aa9.65□□□□□ -0.87
GTF3C2-202ENST00000359541 TPSB2P20231 275 aa9.65□□□□□ -0.87
GTF3C2-202ENST00000359541 EFTUD2Q15029 972 aaKnown RBP eCLIP9.65□□□□□ -0.873e-7■■■■■ 29.6
GTF3C2-202ENST00000359541 TPSAB1Q15661 275 aa9.65□□□□□ -0.87
GTF3C2-202ENST00000359541 SPDYAQ5MJ70 313 aa9.65□□□□□ -0.87
GTF3C2-202ENST00000359541 C2orf69Q8N8R5 385 aa9.65□□□□□ -0.87
GTF3C2-202ENST00000359541 BANPQ8N9N5 519 aa9.65□□□□□ -0.87
GTF3C2-202ENST00000359541 PCDH19Q8TAB3 1148 aa9.65□□□□□ -0.87
GTF3C2-202ENST00000359541 GSDMBQ8TAX9 411 aa9.65□□□□□ -0.87
GTF3C2-202ENST00000359541 DCAKDQ8WVC6 231 aa9.65□□□□□ -0.87
GTF3C2-202ENST00000359541 THOC1Q96FV9 657 aaKnown RBP9.65□□□□□ -0.87
GTF3C2-202ENST00000359541 RSRC1Q96IZ7 334 aaKnown RBP9.65□□□□□ -0.87
GTF3C2-202ENST00000359541 RMDN2Q96LZ7 410 aa9.65□□□□□ -0.87
GTF3C2-202ENST00000359541 CD248Q9HCU0 757 aa9.65□□□□□ -0.87
GTF3C2-202ENST00000359541 NPHS2Q9NP85 383 aa9.65□□□□□ -0.87
GTF3C2-202ENST00000359541 MTO1Q9Y2Z2 717 aaKnown RBP9.65□□□□□ -0.87
GTF3C2-202ENST00000359541 TEX264Q9Y6I9 313 aa9.65□□□□□ -0.87
GTF3C2-202ENST00000359541 OTOFQ9HC10 1997 aa9.64□□□□□ -0.87
GTF3C2-202ENST00000359541 C11orf97A0A1B0GVM6 126 aaPredicted RBP9.64□□□□□ -0.87
GTF3C2-202ENST00000359541 TCRBV7S3A2A0A539 114 aa9.64□□□□□ -0.87
GTF3C2-202ENST00000359541 TRIM49D1C9J1S8 452 aa9.64□□□□□ -0.87
GTF3C2-202ENST00000359541 ARFIP2P53365 341 aa9.64□□□□□ -0.87
GTF3C2-202ENST00000359541 MTM1Q13496 603 aa9.64□□□□□ -0.87
GTF3C2-202ENST00000359541 IRF5Q13568 498 aa9.64□□□□□ -0.87
GTF3C2-202ENST00000359541 MFSD10Q14728 455 aa9.64□□□□□ -0.87
GTF3C2-202ENST00000359541 NLRP9Q7RTR0 991 aa9.64□□□□□ -0.87
GTF3C2-202ENST00000359541 CRYBG2Q8N1P7 616 aa9.64□□□□□ -0.87
GTF3C2-202ENST00000359541 INPP5DQ92835 1189 aa9.64□□□□□ -0.87
GTF3C2-202ENST00000359541 NOP53Q9NZM5 478 aaKnown RBP9.64□□□□□ -0.87
GTF3C2-202ENST00000359541 C2CD2LO14523 706 aa9.64□□□□□ -0.87
GTF3C2-202ENST00000359541 APOEP02649 317 aa9.64□□□□□ -0.87
GTF3C2-202ENST00000359541 HOXD8P13378 290 aaPredicted RBP9.64□□□□□ -0.87
GTF3C2-202ENST00000359541 CYP3A5P20815 502 aa9.64□□□□□ -0.87
GTF3C2-202ENST00000359541 CCND1P24385 295 aa9.64□□□□□ -0.87
GTF3C2-202ENST00000359541 YWHAZP63104 245 aaKnown RBP9.64□□□□□ -0.87
GTF3C2-202ENST00000359541 PDK1Q15118 436 aa9.64□□□□□ -0.87
GTF3C2-202ENST00000359541 TWF2Q6IBS0 349 aaKnown RBP9.64□□□□□ -0.87
GTF3C2-202ENST00000359541 CHSY1Q86X52 802 aa9.64□□□□□ -0.87
GTF3C2-202ENST00000359541 ARHGAP24Q8N264 748 aa9.64□□□□□ -0.87
GTF3C2-202ENST00000359541 CCDC110Q8TBZ0 833 aa9.64□□□□□ -0.87
GTF3C2-202ENST00000359541 KLF6Q99612 283 aaPredicted RBP9.64□□□□□ -0.87
GTF3C2-202ENST00000359541 NAT9Q9BTE0 207 aa9.64□□□□□ -0.87
GTF3C2-202ENST00000359541 SLC38A7Q9NVC3 462 aa9.64□□□□□ -0.87
GTF3C2-202ENST00000359541 SH3BP1Q9Y3L3 701 aa9.64□□□□□ -0.87
GTF3C2-202ENST00000359541 GOLGB1Q14789 3259 aaKnown RBP9.64□□□□□ -0.87
GTF3C2-202ENST00000359541 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP9.64□□□□□ -0.87
GTF3C2-202ENST00000359541 GCATO75600 419 aa9.64□□□□□ -0.87
GTF3C2-202ENST00000359541 GJA5P36382 358 aa9.64□□□□□ -0.87
GTF3C2-202ENST00000359541 MAP2K2P36507 400 aa9.64□□□□□ -0.87
GTF3C2-202ENST00000359541 GAD2Q05329 585 aa9.64□□□□□ -0.87
GTF3C2-202ENST00000359541 FAAP100Q0VG06 881 aa9.64□□□□□ -0.87
GTF3C2-202ENST00000359541 PKDCCQ504Y2 493 aa9.64□□□□□ -0.87
GTF3C2-202ENST00000359541 FAXCQ5TGI0 409 aa9.64□□□□□ -0.87
GTF3C2-202ENST00000359541 RSPH3Q86UC2 560 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms