RNA–Protein interactions for RNA: ENST00000359526.8

DNMT1-202, Transcript of DNA methyltransferase 1, humanhuman

TSL 1 (best) BASIC

Gene DNMT1, Length 5,206 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-202ENST00000359526 INPP5DQ92835 1189 aa12.59□□□□□ -0.39
DNMT1-202ENST00000359526 NMD3Q96D46 503 aaKnown RBP12.59□□□□□ -0.39
DNMT1-202ENST00000359526 MAML3Q96JK9 1138 aa12.59□□□□□ -0.39
DNMT1-202ENST00000359526 FAM124BQ9H5Z6 455 aaPredicted RBP12.59□□□□□ -0.39
DNMT1-202ENST00000359526 CNGB3Q9NQW8 809 aa12.59□□□□□ -0.39
DNMT1-202ENST00000359526 PCDHA3Q9Y5H8 950 aa12.59□□□□□ -0.39
DNMT1-202ENST00000359526 MPOP05164 745 aa12.58□□□□□ -0.39
DNMT1-202ENST00000359526 NCAM1P13591 858 aa12.58□□□□□ -0.39
DNMT1-202ENST00000359526 PEX5P50542 639 aa12.58□□□□□ -0.39
DNMT1-202ENST00000359526 CACNA2D1P54289 1103 aa12.58□□□□□ -0.39
DNMT1-202ENST00000359526 AARS2Q5JTZ9 985 aaKnown RBP12.58□□□□□ -0.39
DNMT1-202ENST00000359526 ABRAQ8N0Z2 381 aa12.58□□□□□ -0.39
DNMT1-202ENST00000359526 SLC25A41Q8N5S1 370 aa12.58□□□□□ -0.39
DNMT1-202ENST00000359526 ECSITQ9BQ95 431 aa12.58□□□□□ -0.39
DNMT1-202ENST00000359526 CBWD1Q9BRT8 395 aa12.58□□□□□ -0.39
DNMT1-202ENST00000359526 COL1A1P02452 1464 aaPredicted RBP12.58□□□□□ -0.4
DNMT1-202ENST00000359526 NCAM2O15394 837 aa12.58□□□□□ -0.4
DNMT1-202ENST00000359526 ERVK-9P63128 1117 aa12.58□□□□□ -0.4
DNMT1-202ENST00000359526 PCSK7Q16549 785 aa12.58□□□□□ -0.4
DNMT1-202ENST00000359526 ZPBP2Q6X784 338 aa12.58□□□□□ -0.4
DNMT1-202ENST00000359526 ZDHHC17Q8IUH5 632 aa12.58□□□□□ -0.4
DNMT1-202ENST00000359526 AVENQ9NQS1 362 aaPredicted RBP12.58□□□□□ -0.4
DNMT1-202ENST00000359526 SAR1AQ9NR31 198 aa12.58□□□□□ -0.4
DNMT1-202ENST00000359526 DNAJC16Q9Y2G8 782 aa12.58□□□□□ -0.4
DNMT1-202ENST00000359526 IPPQ9Y573 584 aa12.58□□□□□ -0.4
DNMT1-202ENST00000359526 A0A1B0GW55 424 aa12.58□□□□□ -0.4
DNMT1-202ENST00000359526 DNALI1O14645 258 aaPredicted RBP12.58□□□□□ -0.4
DNMT1-202ENST00000359526 LRG1P02750 347 aa12.58□□□□□ -0.4
DNMT1-202ENST00000359526 DUX4L2P0CJ85 424 aa12.58□□□□□ -0.4
DNMT1-202ENST00000359526 DUX4L3P0CJ86 424 aa12.58□□□□□ -0.4
DNMT1-202ENST00000359526 DUX4L4P0CJ87 422 aa12.58□□□□□ -0.4
DNMT1-202ENST00000359526 DUX4L5P0CJ88 424 aa12.58□□□□□ -0.4
DNMT1-202ENST00000359526 DUX4L6P0CJ89 424 aa12.58□□□□□ -0.4
DNMT1-202ENST00000359526 DUX4L7P0CJ90 424 aa12.58□□□□□ -0.4
DNMT1-202ENST00000359526 ALDH5A1P51649 535 aaPredicted RBP12.58□□□□□ -0.4
DNMT1-202ENST00000359526 CSTF3Q12996 717 aaKnown RBP12.58□□□□□ -0.4
DNMT1-202ENST00000359526 TRAF7Q6Q0C0 670 aa12.58□□□□□ -0.4
DNMT1-202ENST00000359526 DENND5BQ6ZUT9 1274 aa12.58□□□□□ -0.4
DNMT1-202ENST00000359526 SH3RF1Q7Z6J0 888 aa12.58□□□□□ -0.4
DNMT1-202ENST00000359526 LRRN4CLQ8ND94 238 aa12.58□□□□□ -0.4
DNMT1-202ENST00000359526 RFWD2Q8NHY2 731 aa12.58□□□□□ -0.4
DNMT1-202ENST00000359526 TMEM169Q96HH4 297 aa12.58□□□□□ -0.4
DNMT1-202ENST00000359526 SEMA4AQ9H3S1 761 aa12.58□□□□□ -0.4
DNMT1-202ENST00000359526 TMEM161AQ9NX61 479 aa12.58□□□□□ -0.4
DNMT1-202ENST00000359526 DUX4Q9UBX2 424 aa12.58□□□□□ -0.4
DNMT1-202ENST00000359526 ZBTB39O15060 712 aa12.58□□□□□ -0.4
DNMT1-202ENST00000359526 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.58□□□□□ -0.4
DNMT1-202ENST00000359526 ST3GAL1Q11201 340 aa12.58□□□□□ -0.4
DNMT1-202ENST00000359526 MCOLN2Q8IZK6 566 aa12.58□□□□□ -0.4
DNMT1-202ENST00000359526 SLC5A5Q92911 643 aa12.58□□□□□ -0.4
DNMT1-202ENST00000359526 TSR3Q9UJK0 312 aaKnown RBP12.58□□□□□ -0.4
DNMT1-202ENST00000359526 USP18Q9UMW8 372 aa12.58□□□□□ -0.4
DNMT1-202ENST00000359526 LTN1O94822 1766 aa12.58□□□□□ -0.4
DNMT1-202ENST00000359526 FAM95CA0A1B0GW59 222 aa12.57□□□□□ -0.4
DNMT1-202ENST00000359526 EPHB2P29323 1055 aa12.57□□□□□ -0.4
DNMT1-202ENST00000359526 PGM5Q15124 567 aa12.57□□□□□ -0.4
DNMT1-202ENST00000359526 TTLL9Q3SXZ7 439 aa12.57□□□□□ -0.4
DNMT1-202ENST00000359526 NBPF12Q5TAG4 269 aaPredicted RBP12.57□□□□□ -0.4
DNMT1-202ENST00000359526 CACHD1Q5VU97 1274 aa12.57□□□□□ -0.4
DNMT1-202ENST00000359526 SNX31Q8N9S9 440 aa12.57□□□□□ -0.4
DNMT1-202ENST00000359526 VPS50Q96JG6 964 aa12.57□□□□□ -0.4
DNMT1-202ENST00000359526 TBCBQ99426 244 aa12.57□□□□□ -0.4
DNMT1-202ENST00000359526 DUSP9Q99956 384 aaKnown RBP12.57□□□□□ -0.4
DNMT1-202ENST00000359526 WDCPQ9H6R7 721 aa12.57□□□□□ -0.4
DNMT1-202ENST00000359526 UXTQ9UBK9 157 aaPredicted RBP12.57□□□□□ -0.4
DNMT1-202ENST00000359526 MCM8Q9UJA3 840 aa12.57□□□□□ -0.4
DNMT1-202ENST00000359526 TRPV2Q9Y5S1 764 aa12.57□□□□□ -0.4
DNMT1-202ENST00000359526 ATP9AO75110 1047 aa12.57□□□□□ -0.4
DNMT1-202ENST00000359526 CPA3P15088 417 aa12.57□□□□□ -0.4
DNMT1-202ENST00000359526 GCNT1Q02742 428 aa12.57□□□□□ -0.4
DNMT1-202ENST00000359526 CACNB2Q08289 660 aaPredicted RBP12.57□□□□□ -0.4
DNMT1-202ENST00000359526 NAB1Q13506 487 aa12.57□□□□□ -0.4
DNMT1-202ENST00000359526 CREG2Q8IUH2 290 aa12.57□□□□□ -0.4
DNMT1-202ENST00000359526 NR1H4Q96RI1 486 aaPredicted RBP12.57□□□□□ -0.4
DNMT1-202ENST00000359526 BTBD10Q9BSF8 475 aa12.57□□□□□ -0.4
DNMT1-202ENST00000359526 FHDC1Q9C0D6 1143 aaPredicted RBP12.57□□□□□ -0.4
DNMT1-202ENST00000359526 ASB7Q9H672 318 aa12.57□□□□□ -0.4
DNMT1-202ENST00000359526 ZNF446Q9NWS9 450 aa12.57□□□□□ -0.4
DNMT1-202ENST00000359526 RUVBL2Q9Y230 463 aaKnown RBP12.57□□□□□ -0.4
DNMT1-202ENST00000359526 GLTPD2A6NH11 291 aa12.57□□□□□ -0.4
DNMT1-202ENST00000359526 M0QYT0 321 aa12.57□□□□□ -0.4
DNMT1-202ENST00000359526 CLPTM1O96005 669 aa12.57□□□□□ -0.4
DNMT1-202ENST00000359526 PTPRAP18433 802 aa12.57□□□□□ -0.4
DNMT1-202ENST00000359526 BCAT1P54687 386 aa12.57□□□□□ -0.4
DNMT1-202ENST00000359526 CCDC153Q494R4 210 aa12.57□□□□□ -0.4
DNMT1-202ENST00000359526 FOXR2Q6PJQ5 311 aa12.57□□□□□ -0.4
DNMT1-202ENST00000359526 SLFN11Q7Z7L1 901 aa12.57□□□□□ -0.4
DNMT1-202ENST00000359526 LRRC71Q8N4P6 559 aa12.57□□□□□ -0.4
DNMT1-202ENST00000359526 ZNF333Q96JL9 665 aa12.57□□□□□ -0.4
DNMT1-202ENST00000359526 ROBO3Q96MS0 1386 aa12.57□□□□□ -0.4
DNMT1-202ENST00000359526 EMILIN2Q9BXX0 1053 aa12.57□□□□□ -0.4
DNMT1-202ENST00000359526 SH3BP1Q9Y3L3 701 aa12.57□□□□□ -0.4
DNMT1-202ENST00000359526 MAPK1P28482 360 aa12.57□□□□□ -0.4
DNMT1-202ENST00000359526 MGAT5Q09328 741 aa12.57□□□□□ -0.4
DNMT1-202ENST00000359526 EIF2B5Q13144 721 aaKnown RBP12.57□□□□□ -0.4
DNMT1-202ENST00000359526 NT5DC3Q86UY8 548 aa12.57□□□□□ -0.4
DNMT1-202ENST00000359526 SLC47A2Q86VL8 602 aa12.57□□□□□ -0.4
DNMT1-202ENST00000359526 SLC22A9Q8IVM8 553 aa12.57□□□□□ -0.4
DNMT1-202ENST00000359526 ZNF483Q8TF39 744 aaPredicted RBP12.57□□□□□ -0.4
DNMT1-202ENST00000359526 SLC20A1Q8WUM9 679 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms