RNA–Protein interactions for RNA: ENST00000359005.8

TRAPPC4-201, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2 BASIC

Gene TRAPPC4, Length 849 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-201ENST00000359005 PDZD4Q76G19 769 aaPredicted RBP11.21□□□□□ -0.61
TRAPPC4-201ENST00000359005 BEND5Q7L4P6 421 aa11.21□□□□□ -0.61
TRAPPC4-201ENST00000359005 PCGF5Q86SE9 256 aa11.21□□□□□ -0.61
TRAPPC4-201ENST00000359005 RBM23Q86U06 439 aaKnown RBP11.21□□□□□ -0.61
TRAPPC4-201ENST00000359005 JAMLQ86YT9 394 aa11.21□□□□□ -0.61
TRAPPC4-201ENST00000359005 COLGALT2Q8IYK4 626 aa11.21□□□□□ -0.61
TRAPPC4-201ENST00000359005 ARHGAP18Q8N392 663 aa11.21□□□□□ -0.61
TRAPPC4-201ENST00000359005 MREGQ8N565 214 aa11.21□□□□□ -0.61
TRAPPC4-201ENST00000359005 EMC1Q8N766 993 aa11.21□□□□□ -0.61
TRAPPC4-201ENST00000359005 CMASQ8NFW8 434 aaPredicted RBP11.21□□□□□ -0.61
TRAPPC4-201ENST00000359005 VN1R2Q8NFZ6 395 aa11.21□□□□□ -0.61
TRAPPC4-201ENST00000359005 FAM172AQ8WUF8 416 aa11.21□□□□□ -0.61
TRAPPC4-201ENST00000359005 RNF25Q96BH1 459 aaPredicted RBP11.21□□□□□ -0.61
TRAPPC4-201ENST00000359005 FAM149B1Q96BN6 582 aa11.21□□□□□ -0.61
TRAPPC4-201ENST00000359005 PABPC5Q96DU9 382 aaKnown RBP11.21□□□□□ -0.61
TRAPPC4-201ENST00000359005 PCED1BQ96HM7 432 aa11.21□□□□□ -0.61
TRAPPC4-201ENST00000359005 CEP295NLQ96MC4 621 aa11.21□□□□□ -0.61
TRAPPC4-201ENST00000359005 DDX23Q9BUQ8 820 aaKnown RBP11.21□□□□□ -0.61
TRAPPC4-201ENST00000359005 FUT8Q9BYC5 575 aa11.21□□□□□ -0.61
TRAPPC4-201ENST00000359005 B3GNT5Q9BYG0 378 aa11.21□□□□□ -0.61
TRAPPC4-201ENST00000359005 CSNK1G1Q9HCP0 422 aa11.21□□□□□ -0.61
TRAPPC4-201ENST00000359005 NGRNQ9NPE2 291 aaKnown RBP11.21□□□□□ -0.61
TRAPPC4-201ENST00000359005 CLDND1Q9NY35 253 aa11.21□□□□□ -0.61
TRAPPC4-201ENST00000359005 RCOR3Q9P2K3 495 aaPredicted RBP11.21□□□□□ -0.61
TRAPPC4-201ENST00000359005 ADAM28Q9UKQ2 775 aa11.21□□□□□ -0.61
TRAPPC4-201ENST00000359005 TCF20Q9UGU0 1960 aaKnown RBP11.2□□□□□ -0.62
TRAPPC4-201ENST00000359005 hCG_1818297A0A087WSY0 165 aa11.2□□□□□ -0.62
TRAPPC4-201ENST00000359005 CFAP69A5D8W1 941 aa11.2□□□□□ -0.62
TRAPPC4-201ENST00000359005 GOLGA6L10A6NI86 522 aa11.2□□□□□ -0.62
TRAPPC4-201ENST00000359005 MAP2K7O14733 419 aa11.2□□□□□ -0.62
TRAPPC4-201ENST00000359005 PER2O15055 1255 aa11.2□□□□□ -0.62
TRAPPC4-201ENST00000359005 MCF2LO15068 1137 aa11.2□□□□□ -0.62
TRAPPC4-201ENST00000359005 TBX10O75333 385 aa11.2□□□□□ -0.62
TRAPPC4-201ENST00000359005 FGF18O76093 207 aa11.2□□□□□ -0.62
TRAPPC4-201ENST00000359005 ZBED1O96006 694 aa11.2□□□□□ -0.62
TRAPPC4-201ENST00000359005 ATF2P15336 505 aa11.2□□□□□ -0.62
TRAPPC4-201ENST00000359005 TGM2P21980 687 aa11.2□□□□□ -0.62
TRAPPC4-201ENST00000359005 ACAT1P24752 427 aaKnown RBP11.2□□□□□ -0.62
TRAPPC4-201ENST00000359005 ARL4AP40617 200 aa11.2□□□□□ -0.62
TRAPPC4-201ENST00000359005 CDKN2BP42772 138 aa11.2□□□□□ -0.62
TRAPPC4-201ENST00000359005 ALDH7A1P49419 539 aaKnown RBP11.2□□□□□ -0.62
TRAPPC4-201ENST00000359005 MAP3K7CLP57077 242 aa11.2□□□□□ -0.62
TRAPPC4-201ENST00000359005 OGDHQ02218 1023 aa11.2□□□□□ -0.62
TRAPPC4-201ENST00000359005 ZNF252P-AS1Q0IIN9 211 aa11.2□□□□□ -0.62
TRAPPC4-201ENST00000359005 MTA1Q13330 715 aa11.2□□□□□ -0.62
TRAPPC4-201ENST00000359005 KLF1Q13351 362 aaPredicted RBP11.2□□□□□ -0.62
TRAPPC4-201ENST00000359005 ADAM15Q13444 863 aa11.2□□□□□ -0.62
TRAPPC4-201ENST00000359005 BYSLQ13895 437 aaKnown RBP11.2□□□□□ -0.62
TRAPPC4-201ENST00000359005 AAK1Q2M2I8 961 aa11.2□□□□□ -0.62
TRAPPC4-201ENST00000359005 PTCRAQ6ISU1 281 aaPredicted RBP11.2□□□□□ -0.62
TRAPPC4-201ENST00000359005 BBS12Q6ZW61 710 aa11.2□□□□□ -0.62
TRAPPC4-201ENST00000359005 TMEM173Q86WV6 379 aaPredicted RBP11.2□□□□□ -0.62
TRAPPC4-201ENST00000359005 COLGALT1Q8NBJ5 622 aa11.2□□□□□ -0.62
TRAPPC4-201ENST00000359005 HSPH1Q92598 858 aa11.2□□□□□ -0.62
TRAPPC4-201ENST00000359005 SNF8Q96H20 258 aa11.2□□□□□ -0.62
TRAPPC4-201ENST00000359005 FMO2Q99518 471 aa11.2□□□□□ -0.62
TRAPPC4-201ENST00000359005 ZNF670Q9BS34 389 aa11.2□□□□□ -0.62
TRAPPC4-201ENST00000359005 CALN1Q9BXU9 219 aa11.2□□□□□ -0.62
TRAPPC4-201ENST00000359005 DCLK3Q9C098 648 aa11.2□□□□□ -0.62
TRAPPC4-201ENST00000359005 FBXO44Q9H4M3 255 aa11.2□□□□□ -0.62
TRAPPC4-201ENST00000359005 CRTAC1Q9NQ79 661 aa11.2□□□□□ -0.62
TRAPPC4-201ENST00000359005 COMMD8Q9NX08 183 aa11.2□□□□□ -0.62
TRAPPC4-201ENST00000359005 CLEC1BQ9P126 229 aa11.2□□□□□ -0.62
TRAPPC4-201ENST00000359005 WHRNQ9P202 907 aa11.2□□□□□ -0.62
TRAPPC4-201ENST00000359005 ASIC3Q9UHC3 531 aa11.2□□□□□ -0.62
TRAPPC4-201ENST00000359005 NFU1Q9UMS0 254 aa11.2□□□□□ -0.62
TRAPPC4-201ENST00000359005 ZNF148Q9UQR1 794 aa11.2□□□□□ -0.62
TRAPPC4-201ENST00000359005 RWDD3Q9Y3V2 267 aa11.2□□□□□ -0.62
TRAPPC4-201ENST00000359005 TRIOO75962 3097 aa11.2□□□□□ -0.62
TRAPPC4-201ENST00000359005 GOLGA6BA6NDN3 693 aa11.19□□□□□ -0.62
TRAPPC4-201ENST00000359005 NT5C1B-RDH14C9J2C7 533 aa11.19□□□□□ -0.62
TRAPPC4-201ENST00000359005 APOC4-APOC2K7ER74 178 aa11.19□□□□□ -0.62
TRAPPC4-201ENST00000359005 ZMYND10O75800 440 aa11.19□□□□□ -0.62
TRAPPC4-201ENST00000359005 SEC31AO94979 1220 aaKnown RBP11.19□□□□□ -0.62
TRAPPC4-201ENST00000359005 GJB6O95452 261 aa11.19□□□□□ -0.62
TRAPPC4-201ENST00000359005 GLP2RO95838 553 aa11.19□□□□□ -0.62
TRAPPC4-201ENST00000359005 APOC2P02655 101 aa11.19□□□□□ -0.62
TRAPPC4-201ENST00000359005 ITGAVP06756 1048 aa11.19□□□□□ -0.62
TRAPPC4-201ENST00000359005 STIP1P31948 543 aaKnown RBP11.19□□□□□ -0.62
TRAPPC4-201ENST00000359005 BRCC3P46736 316 aa11.19□□□□□ -0.62
TRAPPC4-201ENST00000359005 NR2C2P49116 596 aa11.19□□□□□ -0.62
TRAPPC4-201ENST00000359005 SULT1E1P49888 294 aa11.19□□□□□ -0.62
TRAPPC4-201ENST00000359005 CDH6P55285 790 aa11.19□□□□□ -0.62
TRAPPC4-201ENST00000359005 ATP11AP98196 1134 aa11.19□□□□□ -0.62
TRAPPC4-201ENST00000359005 PTK6Q13882 451 aa11.19□□□□□ -0.62
TRAPPC4-201ENST00000359005 CDO1Q16878 200 aa11.19□□□□□ -0.62
TRAPPC4-201ENST00000359005 CCDC14Q49A88 953 aa11.19□□□□□ -0.62
TRAPPC4-201ENST00000359005 RAB41Q5JT25 222 aa11.19□□□□□ -0.62
TRAPPC4-201ENST00000359005 ACBD5Q5T8D3 534 aaPredicted RBP11.19□□□□□ -0.62
TRAPPC4-201ENST00000359005 KAZNQ674X7 775 aa11.19□□□□□ -0.62
TRAPPC4-201ENST00000359005 DUPD1Q68J44 220 aa11.19□□□□□ -0.62
TRAPPC4-201ENST00000359005 MFSD7Q6UXD7 560 aa11.19□□□□□ -0.62
TRAPPC4-201ENST00000359005 ANKS3Q6ZW76 656 aa11.19□□□□□ -0.62
TRAPPC4-201ENST00000359005 RFX6Q8HWS3 928 aa11.19□□□□□ -0.62
TRAPPC4-201ENST00000359005 C3orf58Q8NDZ4 430 aa11.19□□□□□ -0.62
TRAPPC4-201ENST00000359005 HDAC7Q8WUI4 952 aa11.19□□□□□ -0.62
TRAPPC4-201ENST00000359005 CASKIN2Q8WXE0 1202 aa11.19□□□□□ -0.62
TRAPPC4-201ENST00000359005 CENPIQ92674 756 aaPredicted RBP11.19□□□□□ -0.62
TRAPPC4-201ENST00000359005 MYLPFQ96A32 169 aa11.19□□□□□ -0.62
TRAPPC4-201ENST00000359005 HEMGNQ9BXL5 484 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 76.2 ms