RNA–Protein interactions for RNA: ENST00000356147.3

PTPRA-203, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRA, Length 3,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-203ENST00000356147 POPDC2Q9HBU9 364 aa10.51□□□□□ -0.73
PTPRA-203ENST00000356147 DMAP1Q9NPF5 467 aaPredicted RBP10.51□□□□□ -0.73
PTPRA-203ENST00000356147 DDX43Q9NXZ2 648 aaKnown RBP10.51□□□□□ -0.73
PTPRA-203ENST00000356147 PSAPP07602 524 aa10.5□□□□□ -0.73
PTPRA-203ENST00000356147 VCLP18206 1134 aa10.5□□□□□ -0.73
PTPRA-203ENST00000356147 OSBPP22059 807 aa10.5□□□□□ -0.73
PTPRA-203ENST00000356147 RGS7P49802 495 aa10.5□□□□□ -0.73
PTPRA-203ENST00000356147 SCNN1BP51168 640 aa10.5□□□□□ -0.73
PTPRA-203ENST00000356147 PRKG1Q13976 671 aa10.5□□□□□ -0.73
PTPRA-203ENST00000356147 GSTA3Q16772 222 aa10.5□□□□□ -0.73
PTPRA-203ENST00000356147 DNAL1Q4LDG9 190 aa10.5□□□□□ -0.73
PTPRA-203ENST00000356147 SPATA24Q86W54 205 aa10.5□□□□□ -0.73
PTPRA-203ENST00000356147 PDSS2Q86YH6 399 aa10.5□□□□□ -0.73
PTPRA-203ENST00000356147 TMEM192Q8IY95 271 aa10.5□□□□□ -0.73
PTPRA-203ENST00000356147 PHTF2Q8N3S3 785 aa10.5□□□□□ -0.73
PTPRA-203ENST00000356147 TTC13Q8NBP0 860 aa10.5□□□□□ -0.73
PTPRA-203ENST00000356147 FAM172AQ8WUF8 416 aa10.5□□□□□ -0.73
PTPRA-203ENST00000356147 AZIN2Q96A70 460 aa10.5□□□□□ -0.73
PTPRA-203ENST00000356147 MPP4Q96JB8 637 aa10.5□□□□□ -0.73
PTPRA-203ENST00000356147 PPP1R16BQ96T49 567 aa10.5□□□□□ -0.73
PTPRA-203ENST00000356147 NIF3L1Q9GZT8 377 aa10.5□□□□□ -0.73
PTPRA-203ENST00000356147 RNPEPQ9H4A4 650 aa10.5□□□□□ -0.73
PTPRA-203ENST00000356147 PREBQ9HCU5 417 aa10.5□□□□□ -0.73
PTPRA-203ENST00000356147 NGRNQ9NPE2 291 aaKnown RBP10.5□□□□□ -0.73
PTPRA-203ENST00000356147 SIRPGQ9P1W8 387 aa10.5□□□□□ -0.73
PTPRA-203ENST00000356147 FETUBQ9UGM5 382 aa10.5□□□□□ -0.73
PTPRA-203ENST00000356147 HNRNPRO43390 633 aaKnown RBP10.5□□□□□ -0.73
PTPRA-203ENST00000356147 METTL18O95568 372 aa10.5□□□□□ -0.73
PTPRA-203ENST00000356147 BPGMP07738 259 aa10.5□□□□□ -0.73
PTPRA-203ENST00000356147 ARRB2P32121 409 aa10.5□□□□□ -0.73
PTPRA-203ENST00000356147 GTF2A2P52657 109 aa10.5□□□□□ -0.73
PTPRA-203ENST00000356147 TRNP1Q6NT89 227 aa10.5□□□□□ -0.73
PTPRA-203ENST00000356147 MAVSQ7Z434 540 aa10.5□□□□□ -0.73
PTPRA-203ENST00000356147 VSIG10LQ86VR7 867 aa10.5□□□□□ -0.73
PTPRA-203ENST00000356147 ADAM32Q8TC27 787 aa10.5□□□□□ -0.73
PTPRA-203ENST00000356147 C7orf26Q96N11 449 aa10.5□□□□□ -0.73
PTPRA-203ENST00000356147 FAM192AQ9GZU8 254 aa10.5□□□□□ -0.73
PTPRA-203ENST00000356147 IFT122Q9HBG6 1241 aa10.5□□□□□ -0.73
PTPRA-203ENST00000356147 STK32BQ9NY57 414 aa10.5□□□□□ -0.73
PTPRA-203ENST00000356147 CNTN6Q9UQ52 1028 aa10.5□□□□□ -0.73
PTPRA-203ENST00000356147 SDR42E2A6NKP2 422 aa10.49□□□□□ -0.73
PTPRA-203ENST00000356147 DCXO43602 365 aa10.49□□□□□ -0.73
PTPRA-203ENST00000356147 NPM3O75607 178 aaKnown RBP10.49□□□□□ -0.73
PTPRA-203ENST00000356147 DGKIO75912 1065 aa10.49□□□□□ -0.73
PTPRA-203ENST00000356147 TRUB2O95900 331 aaKnown RBP10.49□□□□□ -0.73
PTPRA-203ENST00000356147 ZBED1O96006 694 aa10.49□□□□□ -0.73
PTPRA-203ENST00000356147 HSPA1LP34931 641 aa10.49□□□□□ -0.73
PTPRA-203ENST00000356147 PGGT1BP53609 377 aa10.49□□□□□ -0.73
PTPRA-203ENST00000356147 CA9Q16790 459 aa10.49□□□□□ -0.73
PTPRA-203ENST00000356147 TMEM132AQ24JP5 1023 aa10.49□□□□□ -0.73
PTPRA-203ENST00000356147 N4BP2L1Q5TBK1 243 aaPredicted RBP10.49□□□□□ -0.73
PTPRA-203ENST00000356147 OLFML2BQ68BL8 750 aa10.49□□□□□ -0.73
PTPRA-203ENST00000356147 EEPD1Q7L9B9 569 aa10.49□□□□□ -0.73
PTPRA-203ENST00000356147 APLFQ8IW19 511 aaPredicted RBP10.49□□□□□ -0.73
PTPRA-203ENST00000356147 LRRC71Q8N4P6 559 aa10.49□□□□□ -0.73
PTPRA-203ENST00000356147 DRAXINQ8NBI3 349 aaPredicted RBP10.49□□□□□ -0.73
PTPRA-203ENST00000356147 NAT14Q8WUY8 206 aa10.49□□□□□ -0.73
PTPRA-203ENST00000356147 DEPDC1BQ8WUY9 529 aa10.49□□□□□ -0.73
PTPRA-203ENST00000356147 RPAP3Q9H6T3 665 aaPredicted RBP10.49□□□□□ -0.73
PTPRA-203ENST00000356147 C17orf75Q9HAS0 396 aa10.49□□□□□ -0.73
PTPRA-203ENST00000356147 APPL1Q9UKG1 709 aa10.49□□□□□ -0.73
PTPRA-203ENST00000356147 SLC15A5A6NIM6 579 aa10.49□□□□□ -0.73
PTPRA-203ENST00000356147 E9PBE3 544 aa10.49□□□□□ -0.73
PTPRA-203ENST00000356147 ADCY6O43306 1168 aa10.49□□□□□ -0.73
PTPRA-203ENST00000356147 KLHL41O60662 606 aa10.49□□□□□ -0.73
PTPRA-203ENST00000356147 SIN3BO75182 1162 aa10.49□□□□□ -0.73
PTPRA-203ENST00000356147 SERPINA6P08185 405 aa10.49□□□□□ -0.73
PTPRA-203ENST00000356147 ASNSP08243 561 aa10.49□□□□□ -0.73
PTPRA-203ENST00000356147 PTPN7P35236 360 aa10.49□□□□□ -0.73
PTPRA-203ENST00000356147 CAPSQ13938 189 aa10.49□□□□□ -0.73
PTPRA-203ENST00000356147 KRT81Q14533 505 aa10.49□□□□□ -0.73
PTPRA-203ENST00000356147 PDK3Q15120 406 aa10.49□□□□□ -0.73
PTPRA-203ENST00000356147 ANGEL2Q5VTE6 544 aaKnown RBP10.49□□□□□ -0.73
PTPRA-203ENST00000356147 IYDQ6PHW0 289 aa10.49□□□□□ -0.73
PTPRA-203ENST00000356147 FRMD7Q6ZUT3 714 aa10.49□□□□□ -0.73
PTPRA-203ENST00000356147 XYLT1Q86Y38 959 aa10.49□□□□□ -0.73
PTPRA-203ENST00000356147 OPTNQ96CV9 577 aa10.49□□□□□ -0.73
PTPRA-203ENST00000356147 ADPGKQ9BRR6 497 aa10.49□□□□□ -0.73
PTPRA-203ENST00000356147 USP29Q9HBJ7 922 aa10.49□□□□□ -0.73
PTPRA-203ENST00000356147 RHBDL2Q9NX52 303 aa10.49□□□□□ -0.73
PTPRA-203ENST00000356147 AHDC1Q5TGY3 1603 aaPredicted RBP10.49□□□□□ -0.73
PTPRA-203ENST00000356147 GOLGA8QA0A0J9YX86 632 aa10.49□□□□□ -0.73
PTPRA-203ENST00000356147 GOLGA8OA6NCC3 632 aa10.49□□□□□ -0.73
PTPRA-203ENST00000356147 GOLGA8NF8WBI6 632 aa10.49□□□□□ -0.73
PTPRA-203ENST00000356147 M0QYV0 167 aa10.49□□□□□ -0.73
PTPRA-203ENST00000356147 APOEP02649 317 aa10.49□□□□□ -0.73
PTPRA-203ENST00000356147 VAV1P15498 845 aa10.49□□□□□ -0.73
PTPRA-203ENST00000356147 CCND2P30279 289 aa10.49□□□□□ -0.73
PTPRA-203ENST00000356147 COPAP53621 1224 aa10.49□□□□□ -0.73
PTPRA-203ENST00000356147 MCCD1P59942 119 aaPredicted RBP10.49□□□□□ -0.73
PTPRA-203ENST00000356147 USP46P62068 366 aa10.49□□□□□ -0.73
PTPRA-203ENST00000356147 PDCD2Q16342 344 aaPredicted RBP10.49□□□□□ -0.73
PTPRA-203ENST00000356147 SNRNP48Q6IEG0 339 aaKnown RBP10.49□□□□□ -0.73
PTPRA-203ENST00000356147 TNS4Q8IZW8 715 aa10.49□□□□□ -0.73
PTPRA-203ENST00000356147 UBR7Q8N806 425 aa10.49□□□□□ -0.73
PTPRA-203ENST00000356147 PIP4K2CQ8TBX8 421 aa10.49□□□□□ -0.73
PTPRA-203ENST00000356147 SLC7A3Q8WY07 619 aa10.49□□□□□ -0.73
PTPRA-203ENST00000356147 KLHL4Q9C0H6 718 aa10.49□□□□□ -0.73
PTPRA-203ENST00000356147 SDCBP2Q9H190 292 aa10.49□□□□□ -0.73
PTPRA-203ENST00000356147 LMCD1Q9NZU5 365 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms