RNA–Protein interactions for RNA: ENST00000356000.7

RTN3-205, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 2,645 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-205ENST00000356000 ITGAXP20702 1163 aa16.27■□□□□ 0.19
RTN3-205ENST00000356000 CAPSLQ8WWF8 208 aa16.27■□□□□ 0.19
RTN3-205ENST00000356000 KCNK16Q96T55 309 aa16.27■□□□□ 0.19
RTN3-205ENST00000356000 SEPT3Q9UH03 358 aa16.27■□□□□ 0.19
RTN3-205ENST00000356000 DNALI1O14645 258 aaPredicted RBP16.26■□□□□ 0.19
RTN3-205ENST00000356000 DYNC1LI2O43237 492 aaPredicted RBP16.26■□□□□ 0.19
RTN3-205ENST00000356000 NMT2O60551 498 aa16.26■□□□□ 0.19
RTN3-205ENST00000356000 GMNNO75496 209 aa16.26■□□□□ 0.19
RTN3-205ENST00000356000 KLHL2O95198 593 aa16.26■□□□□ 0.19
RTN3-205ENST00000356000 MSL3P1P0C860 447 aa16.26■□□□□ 0.19
RTN3-205ENST00000356000 NR4A1P22736 598 aa16.26■□□□□ 0.19
RTN3-205ENST00000356000 CXCR2P25025 360 aa16.26■□□□□ 0.19
RTN3-205ENST00000356000 GNL1P36915 607 aaPredicted RBP16.26■□□□□ 0.19
RTN3-205ENST00000356000 KRT6CP48668 564 aa16.26■□□□□ 0.19
RTN3-205ENST00000356000 TPTEP56180 551 aa16.26■□□□□ 0.19
RTN3-205ENST00000356000 BST1Q10588 318 aa16.26■□□□□ 0.19
RTN3-205ENST00000356000 DGKDQ16760 1214 aa16.26■□□□□ 0.19
RTN3-205ENST00000356000 DENND5BQ6ZUT9 1274 aa16.26■□□□□ 0.19
RTN3-205ENST00000356000 EFCAB3Q8N7B9 438 aa16.26■□□□□ 0.19
RTN3-205ENST00000356000 CEP95Q96GE4 821 aa16.26■□□□□ 0.19
RTN3-205ENST00000356000 BTBD6Q96KE9 485 aa16.26■□□□□ 0.19
RTN3-205ENST00000356000 PAFAH2Q99487 392 aa16.26■□□□□ 0.19
RTN3-205ENST00000356000 FRMD8Q9BZ67 464 aaPredicted RBP16.26■□□□□ 0.19
RTN3-205ENST00000356000 HOXD1Q9GZZ0 328 aa16.26■□□□□ 0.19
RTN3-205ENST00000356000 COL1A1P02452 1464 aaPredicted RBP16.26■□□□□ 0.19
RTN3-205ENST00000356000 A0A087WXM4 84 aa16.26■□□□□ 0.19
RTN3-205ENST00000356000 POTEMA6NI47 508 aa16.26■□□□□ 0.19
RTN3-205ENST00000356000 SLC16A3O15427 465 aaKnown RBP16.26■□□□□ 0.19
RTN3-205ENST00000356000 ICMTO60725 284 aa16.26■□□□□ 0.19
RTN3-205ENST00000356000 EIF2AK2P19525 551 aaKnown RBP16.26■□□□□ 0.19
RTN3-205ENST00000356000 ENPP1P22413 925 aa16.26■□□□□ 0.19
RTN3-205ENST00000356000 CDH15P55291 814 aa16.26■□□□□ 0.19
RTN3-205ENST00000356000 GPX6P59796 221 aa16.26■□□□□ 0.19
RTN3-205ENST00000356000 SLC18A2Q05940 514 aa16.26■□□□□ 0.19
RTN3-205ENST00000356000 FSTL1Q12841 308 aa16.26■□□□□ 0.19
RTN3-205ENST00000356000 ECM1Q16610 540 aa16.26■□□□□ 0.19
RTN3-205ENST00000356000 LDHAL6AQ6ZMR3 332 aa16.26■□□□□ 0.19
RTN3-205ENST00000356000 RAB34Q9BZG1 259 aa16.26■□□□□ 0.19
RTN3-205ENST00000356000 COPS7BQ9H9Q2 264 aaPredicted RBP16.26■□□□□ 0.19
RTN3-205ENST00000356000 CXorf21Q9HAI6 301 aa16.26■□□□□ 0.19
RTN3-205ENST00000356000 ARHGEF37A1IGU5 675 aa16.25■□□□□ 0.19
RTN3-205ENST00000356000 ZNF26P17031 533 aaPredicted RBP16.25■□□□□ 0.19
RTN3-205ENST00000356000 TFAP4Q01664 338 aa16.25■□□□□ 0.19
RTN3-205ENST00000356000 GNA12Q03113 381 aa16.25■□□□□ 0.19
RTN3-205ENST00000356000 PRKG1Q13976 671 aa16.25■□□□□ 0.19
RTN3-205ENST00000356000 CRY1Q16526 586 aa16.25■□□□□ 0.19
RTN3-205ENST00000356000 KAZNQ674X7 775 aa16.25■□□□□ 0.19
RTN3-205ENST00000356000 HEATR3Q7Z4Q2 680 aa16.25■□□□□ 0.19
RTN3-205ENST00000356000 FIBCD1Q8N539 461 aa16.25■□□□□ 0.19
RTN3-205ENST00000356000 ZNF564Q8TBZ8 553 aaPredicted RBP16.25■□□□□ 0.19
RTN3-205ENST00000356000 DCAKDQ8WVC6 231 aa16.25■□□□□ 0.19
RTN3-205ENST00000356000 ZNF486Q96H40 463 aaPredicted RBP16.25■□□□□ 0.19
RTN3-205ENST00000356000 EBF4Q9BQW3 602 aa16.25■□□□□ 0.19
RTN3-205ENST00000356000 NYXQ9GZU5 481 aa16.25■□□□□ 0.19
RTN3-205ENST00000356000 TP63Q9H3D4 680 aaPredicted RBP16.25■□□□□ 0.19
RTN3-205ENST00000356000 TBC1D14Q9P2M4 693 aa16.25■□□□□ 0.19
RTN3-205ENST00000356000 ESYT2A0FGR8 921 aa16.25■□□□□ 0.19
RTN3-205ENST00000356000 TTKP33981 857 aa16.25■□□□□ 0.19
RTN3-205ENST00000356000 SLC16A2P36021 539 aa16.25■□□□□ 0.19
RTN3-205ENST00000356000 CALCRLQ16602 461 aa16.25■□□□□ 0.19
RTN3-205ENST00000356000 CCDC14Q49A88 953 aa16.25■□□□□ 0.19
RTN3-205ENST00000356000 ATG16L1Q676U5 607 aa16.25■□□□□ 0.19
RTN3-205ENST00000356000 NEK10Q6ZWH5 1172 aa16.25■□□□□ 0.19
RTN3-205ENST00000356000 GALNT13Q8IUC8 556 aa16.25■□□□□ 0.19
RTN3-205ENST00000356000 Q8N9G6 341 aaPredicted RBP16.25■□□□□ 0.19
RTN3-205ENST00000356000 SLC20A1Q8WUM9 679 aa16.25■□□□□ 0.19
RTN3-205ENST00000356000 KBTBD7Q8WVZ9 684 aa16.25■□□□□ 0.19
RTN3-205ENST00000356000 ZNF597Q96LX8 424 aa16.25■□□□□ 0.19
RTN3-205ENST00000356000 B3GNT4Q9C0J1 378 aa16.25■□□□□ 0.19
RTN3-205ENST00000356000 AASDHPPTQ9NRN7 309 aa16.25■□□□□ 0.19
RTN3-205ENST00000356000 DDX56Q9NY93 547 aaKnown RBP16.25■□□□□ 0.19
RTN3-205ENST00000356000 MOSPD1Q9UJG1 213 aa16.25■□□□□ 0.19
RTN3-205ENST00000356000 ROBO3Q96MS0 1386 aa16.25■□□□□ 0.19
RTN3-205ENST00000356000 A0A0B4J269 797 aa16.24■□□□□ 0.19
RTN3-205ENST00000356000 ILVBLA1L0T0 632 aa16.24■□□□□ 0.19
RTN3-205ENST00000356000 C7orf72A4D263 438 aa16.24■□□□□ 0.19
RTN3-205ENST00000356000 PDE8BO95263 885 aa16.24■□□□□ 0.19
RTN3-205ENST00000356000 MT-ND3P03897 115 aa16.24■□□□□ 0.19
RTN3-205ENST00000356000 FYNP06241 537 aa16.24■□□□□ 0.19
RTN3-205ENST00000356000 NMT1P30419 496 aaKnown RBP16.24■□□□□ 0.19
RTN3-205ENST00000356000 BMPR1AP36894 532 aa16.24■□□□□ 0.19
RTN3-205ENST00000356000 CASP5P51878 434 aa16.24■□□□□ 0.19
RTN3-205ENST00000356000 TUBB3Q13509 450 aa16.24■□□□□ 0.19
RTN3-205ENST00000356000 KNOP1Q1ED39 458 aaKnown RBP16.24■□□□□ 0.19
RTN3-205ENST00000356000 TWF2Q6IBS0 349 aaKnown RBP16.24■□□□□ 0.19
RTN3-205ENST00000356000 SH2D5Q6ZV89 423 aa16.24■□□□□ 0.19
RTN3-205ENST00000356000 NEDD1Q8NHV4 660 aa16.24■□□□□ 0.19
RTN3-205ENST00000356000 ACDQ96AP0 544 aa16.24■□□□□ 0.19
RTN3-205ENST00000356000 PKP2Q99959 881 aa16.24■□□□□ 0.19
RTN3-205ENST00000356000 C1orf50Q9BV19 199 aa16.24■□□□□ 0.19
RTN3-205ENST00000356000 OSBPL11Q9BXB4 747 aa16.24■□□□□ 0.19
RTN3-205ENST00000356000 AGO2Q9UKV8 859 aaKnown RBP16.24■□□□□ 0.19
RTN3-205ENST00000356000 KIAA1257Q9ULG3 409 aa16.24■□□□□ 0.19
RTN3-205ENST00000356000 LAMB2P55268 1798 aa16.24■□□□□ 0.19
RTN3-205ENST00000356000 CYP2D7A0A087X1C5 515 aa16.24■□□□□ 0.19
RTN3-205ENST00000356000 DENND3A2RUS2 1198 aa16.24■□□□□ 0.19
RTN3-205ENST00000356000 SLC22A1O15245 554 aa16.24■□□□□ 0.19
RTN3-205ENST00000356000 MSI1O43347 362 aaKnown RBP16.24■□□□□ 0.19
RTN3-205ENST00000356000 TOMM70O94826 608 aa16.24■□□□□ 0.19
RTN3-205ENST00000356000 ERBB2P04626 1255 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms