RNA–Protein interactions for RNA: ENST00000354880.9

CTSA-202, Transcript of cathepsin A, humanhuman

TSL 2 BASIC

Gene CTSA, Length 1,820 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-202ENST00000354880 KDELR1P24390 212 aa16.26■□□□□ 0.19
CTSA-202ENST00000354880 PGFP49763 221 aa16.26■□□□□ 0.19
CTSA-202ENST00000354880 NME3Q13232 169 aa16.26■□□□□ 0.19
CTSA-202ENST00000354880 TFDP3Q5H9I0 405 aa16.26■□□□□ 0.19
CTSA-202ENST00000354880 ERMARDQ5T6L9 678 aa16.26■□□□□ 0.19
CTSA-202ENST00000354880 SPOCD1Q6ZMY3 1216 aa16.26■□□□□ 0.19
CTSA-202ENST00000354880 ANKS1BQ7Z6G8 1248 aa16.26■□□□□ 0.19
CTSA-202ENST00000354880 FAM131BQ86XD5 332 aa16.26■□□□□ 0.19
CTSA-202ENST00000354880 ADAM32Q8TC27 787 aa16.26■□□□□ 0.19
CTSA-202ENST00000354880 SPPL3Q8TCT6 385 aa16.26■□□□□ 0.19
CTSA-202ENST00000354880 POF1BQ8WVV4 589 aa16.26■□□□□ 0.19
CTSA-202ENST00000354880 MAIP1Q8WWC4 291 aa16.26■□□□□ 0.19
CTSA-202ENST00000354880 SNRNP25Q9BV90 132 aaKnown RBP16.26■□□□□ 0.19
CTSA-202ENST00000354880 ENTPD7Q9NQZ7 604 aa16.26■□□□□ 0.19
CTSA-202ENST00000354880 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.26■□□□□ 0.19
CTSA-202ENST00000354880 COX16Q9P0S2 106 aa16.26■□□□□ 0.19
CTSA-202ENST00000354880 GMIPQ9P107 970 aa16.26■□□□□ 0.19
CTSA-202ENST00000354880 MTUS1Q9ULD2 1270 aa16.26■□□□□ 0.19
CTSA-202ENST00000354880 GBF1Q92538 1859 aa16.25■□□□□ 0.19
CTSA-202ENST00000354880 TCRBV7S2A1N4TA0A589 114 aa16.25■□□□□ 0.19
CTSA-202ENST00000354880 C3orf70A6NLC5 250 aaPredicted RBP16.25■□□□□ 0.19
CTSA-202ENST00000354880 PRRG1O14668 218 aa16.25■□□□□ 0.19
CTSA-202ENST00000354880 RB1P06400 928 aa16.25■□□□□ 0.19
CTSA-202ENST00000354880 PTPN7P35236 360 aa16.25■□□□□ 0.19
CTSA-202ENST00000354880 CDKN2BP42772 138 aa16.25■□□□□ 0.19
CTSA-202ENST00000354880 ALDH1A3P47895 512 aa16.25■□□□□ 0.19
CTSA-202ENST00000354880 ERVFC1P60507 584 aa16.25■□□□□ 0.19
CTSA-202ENST00000354880 UBE3AQ05086 875 aa16.25■□□□□ 0.19
CTSA-202ENST00000354880 TAF10Q12962 218 aa16.25■□□□□ 0.19
CTSA-202ENST00000354880 PPP2R5EQ16537 467 aa16.25■□□□□ 0.19
CTSA-202ENST00000354880 TCEAL8Q8IYN2 117 aa16.25■□□□□ 0.19
CTSA-202ENST00000354880 TTLL2Q9BWV7 592 aa16.25■□□□□ 0.19
CTSA-202ENST00000354880 HEMGNQ9BXL5 484 aa16.25■□□□□ 0.19
CTSA-202ENST00000354880 FAM204AQ9H8W3 233 aa16.25■□□□□ 0.19
CTSA-202ENST00000354880 PIGVQ9NUD9 493 aa16.25■□□□□ 0.19
CTSA-202ENST00000354880 DDIT4Q9NX09 232 aa16.25■□□□□ 0.19
CTSA-202ENST00000354880 NR2E1Q9Y466 385 aa16.25■□□□□ 0.19
CTSA-202ENST00000354880 YIPF1Q9Y548 306 aa16.25■□□□□ 0.19
CTSA-202ENST00000354880 CDH23Q9H251 3354 aa16.24■□□□□ 0.19
CTSA-202ENST00000354880 hCG_1818297A0A087WSY0 165 aa16.24■□□□□ 0.19
CTSA-202ENST00000354880 F9P00740 461 aa16.24■□□□□ 0.19
CTSA-202ENST00000354880 ADH1AP07327 375 aa16.24■□□□□ 0.19
CTSA-202ENST00000354880 PSEN1P49768 467 aa16.24■□□□□ 0.19
CTSA-202ENST00000354880 CDH6P55285 790 aa16.24■□□□□ 0.19
CTSA-202ENST00000354880 SPRED2Q7Z698 418 aa16.24■□□□□ 0.19
CTSA-202ENST00000354880 MAP7D3Q8IWC1 876 aa16.24■□□□□ 0.19
CTSA-202ENST00000354880 ZDHHC14Q8IZN3 488 aa16.24■□□□□ 0.19
CTSA-202ENST00000354880 CCDC185Q8N715 623 aa16.24■□□□□ 0.19
CTSA-202ENST00000354880 DQX1Q8TE96 717 aaKnown RBP16.24■□□□□ 0.19
CTSA-202ENST00000354880 RNF139Q8WU17 664 aa16.24■□□□□ 0.19
CTSA-202ENST00000354880 HERPUD2Q9BSE4 406 aa16.24■□□□□ 0.19
CTSA-202ENST00000354880 UBE2OQ9C0C9 1292 aaKnown RBP16.24■□□□□ 0.19
CTSA-202ENST00000354880 WDR6Q9NNW5 1121 aaKnown RBP16.24■□□□□ 0.19
CTSA-202ENST00000354880 TLR9Q9NR96 1032 aa16.24■□□□□ 0.19
CTSA-202ENST00000354880 TLR8Q9NR97 1041 aaKnown RBP16.24■□□□□ 0.19
CTSA-202ENST00000354880 OSER1Q9NX31 292 aa16.24■□□□□ 0.19
CTSA-202ENST00000354880 MAGED2Q9UNF1 606 aaPredicted RBP16.24■□□□□ 0.19
CTSA-202ENST00000354880 PCDHA11Q9Y5I1 949 aa16.24■□□□□ 0.19
CTSA-202ENST00000354880 TGM5O43548 720 aa16.24■□□□□ 0.19
CTSA-202ENST00000354880 CD48P09326 243 aa16.24■□□□□ 0.19
CTSA-202ENST00000354880 CSH1P0DML2 217 aa16.24■□□□□ 0.19
CTSA-202ENST00000354880 CSH2P0DML3 217 aa16.24■□□□□ 0.19
CTSA-202ENST00000354880 KRT10P13645 584 aa16.24■□□□□ 0.19
CTSA-202ENST00000354880 DNAJB1P25685 340 aa16.24■□□□□ 0.19
CTSA-202ENST00000354880 KLF1Q13351 362 aaPredicted RBP16.24■□□□□ 0.19
CTSA-202ENST00000354880 PDK2Q15119 407 aa16.24■□□□□ 0.19
CTSA-202ENST00000354880 SIX1Q15475 284 aaPredicted RBP16.24■□□□□ 0.19
CTSA-202ENST00000354880 ELF2Q15723 593 aa16.24■□□□□ 0.19
CTSA-202ENST00000354880 TAZQ16635 292 aa16.24■□□□□ 0.19
CTSA-202ENST00000354880 ZC3H12AQ5D1E8 599 aaKnown RBP16.24■□□□□ 0.19
CTSA-202ENST00000354880 PLPP4Q5VZY2 271 aa16.24■□□□□ 0.19
CTSA-202ENST00000354880 KAZNQ674X7 775 aa16.24■□□□□ 0.19
CTSA-202ENST00000354880 TAC4Q86UU9 113 aa16.24■□□□□ 0.19
CTSA-202ENST00000354880 TNS4Q8IZW8 715 aa16.24■□□□□ 0.19
CTSA-202ENST00000354880 TSC1Q92574 1164 aa16.24■□□□□ 0.19
CTSA-202ENST00000354880 SAMD11Q96NU1 681 aa16.24■□□□□ 0.19
CTSA-202ENST00000354880 TGS1Q96RS0 853 aaKnown RBP16.24■□□□□ 0.19
CTSA-202ENST00000354880 KRT12Q99456 494 aa16.24■□□□□ 0.19
CTSA-202ENST00000354880 CALN1Q9BXU9 219 aa16.24■□□□□ 0.19
CTSA-202ENST00000354880 EMILIN2Q9BXX0 1053 aa16.24■□□□□ 0.19
CTSA-202ENST00000354880 GPATCH2LQ9NWQ4 482 aa16.24■□□□□ 0.19
CTSA-202ENST00000354880 CLIC5Q9NZA1 410 aa16.24■□□□□ 0.19
CTSA-202ENST00000354880 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.24■□□□□ 0.193e-6■■□□□ 12.6
CTSA-202ENST00000354880 AP4E1Q9UPM8 1137 aa16.24■□□□□ 0.19
CTSA-202ENST00000354880 EFR3BQ9Y2G0 817 aa16.24■□□□□ 0.19
CTSA-202ENST00000354880 TJP3O95049 919 aa16.23■□□□□ 0.19
CTSA-202ENST00000354880 IGLV3-25P01717 112 aa16.23■□□□□ 0.19
CTSA-202ENST00000354880 RHOXF2BP0C7M4 288 aa16.23■□□□□ 0.19
CTSA-202ENST00000354880 GBP1P32455 592 aa16.23■□□□□ 0.19
CTSA-202ENST00000354880 ARSEP51690 589 aa16.23■□□□□ 0.19
CTSA-202ENST00000354880 KRT81Q14533 505 aa16.23■□□□□ 0.19
CTSA-202ENST00000354880 VEPH1Q14D04 833 aa16.23■□□□□ 0.19
CTSA-202ENST00000354880 DPYSL2Q16555 572 aa16.23■□□□□ 0.19
CTSA-202ENST00000354880 CCDC70Q6NSX1 233 aa16.23■□□□□ 0.19
CTSA-202ENST00000354880 SND1Q7KZF4 910 aaKnown RBP eCLIP16.23■□□□□ 0.191e-7■■■□□ 14.8
CTSA-202ENST00000354880 PSTKQ8IV42 348 aaKnown RBP16.23■□□□□ 0.19
CTSA-202ENST00000354880 KLHL7Q8IXQ5 586 aa16.23■□□□□ 0.19
CTSA-202ENST00000354880 PRELID2Q8N945 189 aa16.23■□□□□ 0.19
CTSA-202ENST00000354880 MRPL43Q8N983 215 aaKnown RBP16.23■□□□□ 0.19
CTSA-202ENST00000354880 KLHL5Q96PQ7 755 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms