RNA–Protein interactions for RNA: ENST00000352993.7

BRCA1-201, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 3,668 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-201ENST00000352993 OXCT2Q9BYC2 517 aaPredicted RBP7.9□□□□□ -1.15
BRCA1-201ENST00000352993 NRDE2Q9H7Z3 1164 aa7.9□□□□□ -1.15
BRCA1-201ENST00000352993 INIPQ9NRY2 104 aa7.9□□□□□ -1.15
BRCA1-201ENST00000352993 C6orf203Q9P0P8 240 aaPredicted RBP7.9□□□□□ -1.15
BRCA1-201ENST00000352993 SLC9A2Q9UBY0 812 aa7.9□□□□□ -1.15
BRCA1-201ENST00000352993 RAB26Q9ULW5 256 aa7.9□□□□□ -1.15
BRCA1-201ENST00000352993 SF3B1O75533 1304 aaKnown RBP eCLIP7.9□□□□□ -1.151e-6■■■■■ 112.6
BRCA1-201ENST00000352993 A0A0B4J269 797 aa7.89□□□□□ -1.15
BRCA1-201ENST00000352993 GOLGA8QA0A0J9YX86 632 aa7.89□□□□□ -1.15
BRCA1-201ENST00000352993 ARHGEF37A1IGU5 675 aa7.89□□□□□ -1.15
BRCA1-201ENST00000352993 GOLGA8OA6NCC3 632 aa7.89□□□□□ -1.15
BRCA1-201ENST00000352993 GOLGA8NF8WBI6 632 aa7.89□□□□□ -1.15
BRCA1-201ENST00000352993 HNRNPDLO14979 420 aaKnown RBP7.89□□□□□ -1.15
BRCA1-201ENST00000352993 MAP3K6O95382 1288 aa7.89□□□□□ -1.15
BRCA1-201ENST00000352993 GDF11O95390 407 aa7.89□□□□□ -1.15
BRCA1-201ENST00000352993 PSMA2P25787 234 aa7.89□□□□□ -1.15
BRCA1-201ENST00000352993 HALP42357 657 aa7.89□□□□□ -1.15
BRCA1-201ENST00000352993 GPC3P51654 580 aa7.89□□□□□ -1.15
BRCA1-201ENST00000352993 IGBP1P78318 339 aa7.89□□□□□ -1.15
BRCA1-201ENST00000352993 CEP55Q53EZ4 464 aa7.89□□□□□ -1.15
BRCA1-201ENST00000352993 CYP4A22Q5TCH4 519 aa7.89□□□□□ -1.15
BRCA1-201ENST00000352993 CCDC80Q76M96 950 aa7.89□□□□□ -1.15
BRCA1-201ENST00000352993 PTAR1Q7Z6K3 402 aaPredicted RBP7.89□□□□□ -1.15
BRCA1-201ENST00000352993 NAT8LQ8N9F0 302 aa7.89□□□□□ -1.15
BRCA1-201ENST00000352993 KCTD6Q8NC69 237 aa7.89□□□□□ -1.15
BRCA1-201ENST00000352993 CATSPER1Q8NEC5 780 aa7.89□□□□□ -1.15
BRCA1-201ENST00000352993 DDHD1Q8NEL9 900 aa7.89□□□□□ -1.15
BRCA1-201ENST00000352993 ZSCAN18Q8TBC5 510 aaPredicted RBP7.89□□□□□ -1.15
BRCA1-201ENST00000352993 ACTRT2Q8TDY3 377 aa7.89□□□□□ -1.15
BRCA1-201ENST00000352993 DQX1Q8TE96 717 aaKnown RBP7.89□□□□□ -1.15
BRCA1-201ENST00000352993 DEPDC1BQ8WUY9 529 aa7.89□□□□□ -1.15
BRCA1-201ENST00000352993 WDR83Q9BRX9 315 aaKnown RBP7.89□□□□□ -1.15
BRCA1-201ENST00000352993 OSBPL6Q9BZF3 934 aa7.89□□□□□ -1.15
BRCA1-201ENST00000352993 WDR11Q9BZH6 1224 aa7.89□□□□□ -1.15
BRCA1-201ENST00000352993 TRPV6Q9H1D0 765 aa7.89□□□□□ -1.15
BRCA1-201ENST00000352993 TUT1Q9H6E5 874 aaKnown RBP7.89□□□□□ -1.15
BRCA1-201ENST00000352993 SPATA7Q9P0W8 599 aa7.89□□□□□ -1.15
BRCA1-201ENST00000352993 CNTN3Q9P232 1028 aa7.89□□□□□ -1.15
BRCA1-201ENST00000352993 FETUBQ9UGM5 382 aa7.89□□□□□ -1.15
BRCA1-201ENST00000352993 COQ6Q9Y2Z9 468 aa7.89□□□□□ -1.15
BRCA1-201ENST00000352993 HEY1Q9Y5J3 304 aa7.89□□□□□ -1.15
BRCA1-201ENST00000352993 CEPT1Q9Y6K0 416 aa7.89□□□□□ -1.15
BRCA1-201ENST00000352993 SH3PXD2BA1X283 911 aa7.89□□□□□ -1.15
BRCA1-201ENST00000352993 G3V3G9 751 aa7.89□□□□□ -1.15
BRCA1-201ENST00000352993 KLF11O14901 512 aa7.89□□□□□ -1.15
BRCA1-201ENST00000352993 LSM1O15116 133 aaKnown RBP7.89□□□□□ -1.15
BRCA1-201ENST00000352993 DENRO43583 198 aaKnown RBP7.89□□□□□ -1.15
BRCA1-201ENST00000352993 CSPG5O95196 566 aa7.89□□□□□ -1.15
BRCA1-201ENST00000352993 BPGMP07738 259 aa7.89□□□□□ -1.15
BRCA1-201ENST00000352993 THRAP10827 490 aa7.89□□□□□ -1.15
BRCA1-201ENST00000352993 RXRGP48443 463 aa7.89□□□□□ -1.15
BRCA1-201ENST00000352993 CACNB3P54284 484 aa7.89□□□□□ -1.15
BRCA1-201ENST00000352993 CDH15P55291 814 aa7.89□□□□□ -1.15
BRCA1-201ENST00000352993 NUP107P57740 925 aa7.89□□□□□ -1.15
BRCA1-201ENST00000352993 ADRM1Q16186 407 aa7.89□□□□□ -1.15
BRCA1-201ENST00000352993 XKR9Q5GH70 373 aa7.89□□□□□ -1.15
BRCA1-201ENST00000352993 DCAF8Q5TAQ9 597 aa7.89□□□□□ -1.15
BRCA1-201ENST00000352993 OGFRL1Q5TC84 451 aaPredicted RBP7.89□□□□□ -1.15
BRCA1-201ENST00000352993 CES4AQ5XG92 561 aa7.89□□□□□ -1.15
BRCA1-201ENST00000352993 NXNQ6DKJ4 435 aa7.89□□□□□ -1.15
BRCA1-201ENST00000352993 FAM196AQ6ZSG2 479 aa7.89□□□□□ -1.15
BRCA1-201ENST00000352993 LRRC43Q8N309 656 aa7.89□□□□□ -1.15
BRCA1-201ENST00000352993 BBS5Q8N3I7 341 aa7.89□□□□□ -1.15
BRCA1-201ENST00000352993 PHTF2Q8N3S3 785 aa7.89□□□□□ -1.15
BRCA1-201ENST00000352993 BHLHE22Q8NFJ8 381 aaPredicted RBP7.89□□□□□ -1.15
BRCA1-201ENST00000352993 TRAF3IP1Q8TDR0 691 aaPredicted RBP7.89□□□□□ -1.15
BRCA1-201ENST00000352993 IRGQQ8WZA9 623 aa7.89□□□□□ -1.15
BRCA1-201ENST00000352993 PPWD1Q96BP3 646 aaKnown RBP7.89□□□□□ -1.15
BRCA1-201ENST00000352993 COX4I2Q96KJ9 171 aa7.89□□□□□ -1.15
BRCA1-201ENST00000352993 TMEM79Q9BSE2 394 aa7.89□□□□□ -1.15
BRCA1-201ENST00000352993 DHRS4Q9BTZ2 278 aa7.89□□□□□ -1.15
BRCA1-201ENST00000352993 DDX4Q9NQI0 724 aaKnown RBP7.89□□□□□ -1.15
BRCA1-201ENST00000352993 TRNAU1APQ9NX07 287 aaKnown RBP7.89□□□□□ -1.15
BRCA1-201ENST00000352993 DAGLAQ9Y4D2 1042 aa7.89□□□□□ -1.15
BRCA1-201ENST00000352993 TRIM17Q9Y577 477 aa7.89□□□□□ -1.15
BRCA1-201ENST00000352993 MYH9P35579 1960 aaKnown RBP7.89□□□□□ -1.15
BRCA1-201ENST00000352993 F5H423 210 aaPredicted RBP7.89□□□□□ -1.15
BRCA1-201ENST00000352993 PIK3R2O00459 728 aa7.89□□□□□ -1.15
BRCA1-201ENST00000352993 PSMD10O75832 226 aa7.89□□□□□ -1.15
BRCA1-201ENST00000352993 APRTP07741 180 aa7.89□□□□□ -1.15
BRCA1-201ENST00000352993 COX4I1P13073 169 aa7.89□□□□□ -1.15
BRCA1-201ENST00000352993 BSPRYQ5W0U4 402 aa7.89□□□□□ -1.15
BRCA1-201ENST00000352993 SPATA18Q8TC71 538 aa7.89□□□□□ -1.15
BRCA1-201ENST00000352993 NKD2Q969F2 451 aaPredicted RBP7.89□□□□□ -1.15
BRCA1-201ENST00000352993 BCAP29Q9UHQ4 241 aa7.89□□□□□ -1.15
BRCA1-201ENST00000352993 ITGA11Q9UKX5 1188 aa7.89□□□□□ -1.15
BRCA1-201ENST00000352993 SORCS3Q9UPU3 1222 aa7.89□□□□□ -1.15
BRCA1-201ENST00000352993 RBMX2Q9Y388 322 aaKnown RBP7.89□□□□□ -1.15
BRCA1-201ENST00000352993 FARP1Q9Y4F1 1045 aaPredicted RBP7.89□□□□□ -1.15
BRCA1-201ENST00000352993 ZHX2Q9Y6X8 837 aa7.89□□□□□ -1.15
BRCA1-201ENST00000352993 CROCCQ5TZA2 2017 aa7.88□□□□□ -1.15
BRCA1-201ENST00000352993 FBP2O00757 339 aa7.88□□□□□ -1.15
BRCA1-201ENST00000352993 STAM2O75886 525 aa7.88□□□□□ -1.15
BRCA1-201ENST00000352993 ALDH1B1P30837 517 aa7.88□□□□□ -1.15
BRCA1-201ENST00000352993 SHMT1P34896 483 aa7.88□□□□□ -1.15
BRCA1-201ENST00000352993 MAPK10P53779 464 aa7.88□□□□□ -1.15
BRCA1-201ENST00000352993 C21orf59P57076 290 aa7.88□□□□□ -1.15
BRCA1-201ENST00000352993 PSMC1P62191 440 aaKnown RBP7.88□□□□□ -1.15
BRCA1-201ENST00000352993 NOMO3P69849 1222 aa7.88□□□□□ -1.15
BRCA1-201ENST00000352993 MRPS5P82675 430 aaKnown RBP7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms