RNA–Protein interactions for RNA: ENST00000351677.6

PTPN11-201, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPN11, Length 6,101 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-201ENST00000351677 POU6F1Q14863 301 aa16.49■□□□□ 0.23
PTPN11-201ENST00000351677 CTXN3Q4LDR2 81 aa16.49■□□□□ 0.23
PTPN11-201ENST00000351677 ADAM32Q8TC27 787 aa16.49■□□□□ 0.23
PTPN11-201ENST00000351677 PURBQ96QR8 312 aaKnown RBP16.49■□□□□ 0.23
PTPN11-201ENST00000351677 TAGLN3Q9UI15 199 aa16.49■□□□□ 0.23
PTPN11-201ENST00000351677 SLC12A8A0AV02 714 aa16.49■□□□□ 0.23
PTPN11-201ENST00000351677 PSMD10O75832 226 aa16.49■□□□□ 0.23
PTPN11-201ENST00000351677 POMCP01189 267 aa16.49■□□□□ 0.23
PTPN11-201ENST00000351677 EPHX2P34913 555 aa16.49■□□□□ 0.23
PTPN11-201ENST00000351677 TGFB2P61812 414 aa16.49■□□□□ 0.23
PTPN11-201ENST00000351677 MGAT5Q09328 741 aa16.49■□□□□ 0.23
PTPN11-201ENST00000351677 CYLC2Q14093 348 aaPredicted RBP16.49■□□□□ 0.23
PTPN11-201ENST00000351677 ANKS3Q6ZW76 656 aa16.49■□□□□ 0.23
PTPN11-201ENST00000351677 WDR18Q9BV38 432 aa16.49■□□□□ 0.23
PTPN11-201ENST00000351677 EFCAB1Q9HAE3 211 aa16.49■□□□□ 0.23
PTPN11-201ENST00000351677 HPS4Q9NQG7 708 aa16.49■□□□□ 0.23
PTPN11-201ENST00000351677 RNF19AQ9NV58 838 aa16.49■□□□□ 0.23
PTPN11-201ENST00000351677 CTNNAL1Q9UBT7 734 aa16.49■□□□□ 0.23
PTPN11-201ENST00000351677 MYOM1P52179 1685 aa16.49■□□□□ 0.23
PTPN11-201ENST00000351677 GAKO14976 1311 aa16.49■□□□□ 0.23
PTPN11-201ENST00000351677 GRIN3BO60391 1043 aa16.49■□□□□ 0.23
PTPN11-201ENST00000351677 MTFR1Q15390 333 aa16.49■□□□□ 0.23
PTPN11-201ENST00000351677 CES3Q6UWW8 571 aa16.49■□□□□ 0.23
PTPN11-201ENST00000351677 PTAR1Q7Z6K3 402 aaPredicted RBP16.49■□□□□ 0.23
PTPN11-201ENST00000351677 ADCK1Q86TW2 530 aa16.49■□□□□ 0.23
PTPN11-201ENST00000351677 HORMAD1Q86X24 394 aa16.49■□□□□ 0.23
PTPN11-201ENST00000351677 EPS8L1Q8TE68 723 aa16.49■□□□□ 0.23
PTPN11-201ENST00000351677 KCND1Q9NSA2 647 aa16.49■□□□□ 0.23
PTPN11-201ENST00000351677 ZNF229Q9UJW7 825 aa16.49■□□□□ 0.23
PTPN11-201ENST00000351677 DDNO94850 711 aaPredicted RBP16.48■□□□□ 0.23
PTPN11-201ENST00000351677 SOAT1P35610 550 aa16.48■□□□□ 0.23
PTPN11-201ENST00000351677 PDPK2PQ6A1A2 396 aa16.48■□□□□ 0.23
PTPN11-201ENST00000351677 SLC30A9Q6PML9 568 aa16.48■□□□□ 0.23
PTPN11-201ENST00000351677 PATL1Q86TB9 770 aaKnown RBP16.48■□□□□ 0.23
PTPN11-201ENST00000351677 ZNF333Q96JL9 665 aa16.48■□□□□ 0.23
PTPN11-201ENST00000351677 SCUBE2Q9NQ36 999 aa16.48■□□□□ 0.23
PTPN11-201ENST00000351677 A1CFQ9NQ94 594 aaKnown RBP16.48■□□□□ 0.23
PTPN11-201ENST00000351677 ACOT9Q9Y305 439 aa16.48■□□□□ 0.23
PTPN11-201ENST00000351677 MAN1A2O60476 641 aa16.48■□□□□ 0.23
PTPN11-201ENST00000351677 MIPP30301 263 aa16.48■□□□□ 0.23
PTPN11-201ENST00000351677 N4BP2L1Q5TBK1 243 aaPredicted RBP16.48■□□□□ 0.23
PTPN11-201ENST00000351677 UGT3A1Q6NUS8 523 aa16.48■□□□□ 0.23
PTPN11-201ENST00000351677 ZNF467Q7Z7K2 595 aaPredicted RBP16.48■□□□□ 0.23
PTPN11-201ENST00000351677 CCDC60Q8IWA6 550 aaPredicted RBP16.48■□□□□ 0.23
PTPN11-201ENST00000351677 OTUB1Q96FW1 271 aaPredicted RBP16.48■□□□□ 0.23
PTPN11-201ENST00000351677 ZNF556Q9HAH1 456 aa16.48■□□□□ 0.23
PTPN11-201ENST00000351677 CLCA2Q9UQC9 943 aa16.48■□□□□ 0.23
PTPN11-201ENST00000351677 ADRB2P07550 413 aa16.48■□□□□ 0.23
PTPN11-201ENST00000351677 DDX5P17844 614 aaKnown RBP16.48■□□□□ 0.23
PTPN11-201ENST00000351677 MGAT1P26572 445 aa16.48■□□□□ 0.23
PTPN11-201ENST00000351677 MZF1P28698 734 aaPredicted RBP16.48■□□□□ 0.23
PTPN11-201ENST00000351677 FBXW4P57775 412 aa16.48■□□□□ 0.23
PTPN11-201ENST00000351677 KCTD19Q17RG1 926 aaPredicted RBP16.48■□□□□ 0.23
PTPN11-201ENST00000351677 NUDT18Q6ZVK8 323 aa16.48■□□□□ 0.23
PTPN11-201ENST00000351677 SYT15Q9BQS2 421 aa16.48■□□□□ 0.23
PTPN11-201ENST00000351677 AVENQ9NQS1 362 aaPredicted RBP16.48■□□□□ 0.23
PTPN11-201ENST00000351677 SAE1Q9UBE0 346 aaPredicted RBP16.48■□□□□ 0.23
PTPN11-201ENST00000351677 LZTS1Q9Y250 596 aa16.48■□□□□ 0.23
PTPN11-201ENST00000351677 ACKR2O00590 384 aa16.48■□□□□ 0.23
PTPN11-201ENST00000351677 MT-CO1P00395 513 aa16.48■□□□□ 0.23
PTPN11-201ENST00000351677 ACADSP16219 412 aa16.48■□□□□ 0.23
PTPN11-201ENST00000351677 KBTBD12Q3ZCT8 623 aa16.48■□□□□ 0.23
PTPN11-201ENST00000351677 TTMPQ5BVD1 217 aa16.48■□□□□ 0.23
PTPN11-201ENST00000351677 ZPBP2Q6X784 338 aa16.48■□□□□ 0.23
PTPN11-201ENST00000351677 CARNMT1Q8N4J0 409 aa16.48■□□□□ 0.23
PTPN11-201ENST00000351677 LNX1Q8TBB1 728 aaPredicted RBP16.48■□□□□ 0.23
PTPN11-201ENST00000351677 NEUROG2Q9H2A3 272 aa16.48■□□□□ 0.23
PTPN11-201ENST00000351677 GPAMQ9HCL2 828 aa16.48■□□□□ 0.23
PTPN11-201ENST00000351677 VPS9D1Q9Y2B5 631 aa16.48■□□□□ 0.23
PTPN11-201ENST00000351677 CASZ1Q86V15 1759 aa16.48■□□□□ 0.23
PTPN11-201ENST00000351677 DDX39BQ13838 428 aaKnown RBP16.48■□□□□ 0.23
PTPN11-201ENST00000351677 BNC2Q6ZN30 1099 aaPredicted RBP16.48■□□□□ 0.23
PTPN11-201ENST00000351677 NMRK2Q9NPI5 230 aa16.48■□□□□ 0.23
PTPN11-201ENST00000351677 KIF1CO43896 1103 aaKnown RBP16.47■□□□□ 0.23
PTPN11-201ENST00000351677 ZCCHC18P0CG32 403 aa16.47■□□□□ 0.23
PTPN11-201ENST00000351677 KCNA4P22459 653 aa16.47■□□□□ 0.23
PTPN11-201ENST00000351677 CERS5Q8N5B7 392 aa16.47■□□□□ 0.23
PTPN11-201ENST00000351677 CCDC126Q96EE4 140 aa16.47■□□□□ 0.23
PTPN11-201ENST00000351677 EVPLLA8MZ36 301 aa16.47■□□□□ 0.23
PTPN11-201ENST00000351677 HNRNPCP07910 306 aaKnown RBP eCLIP16.47■□□□□ 0.234e-6■□□□□ 11.1
PTPN11-201ENST00000351677 OXCT1P55809 520 aa16.47■□□□□ 0.23
PTPN11-201ENST00000351677 SREBF2Q12772 1141 aa16.47■□□□□ 0.23
PTPN11-201ENST00000351677 GANQ9H2C0 597 aa16.47■□□□□ 0.23
PTPN11-201ENST00000351677 RBM22Q9NW64 420 aaKnown RBP eCLIP16.47■□□□□ 0.23
PTPN11-201ENST00000351677 CCDC130P13994 396 aa16.47■□□□□ 0.23
PTPN11-201ENST00000351677 ETS1P14921 441 aa16.47■□□□□ 0.23
PTPN11-201ENST00000351677 PTPN4P29074 926 aa16.47■□□□□ 0.23
PTPN11-201ENST00000351677 SERPINB3P29508 390 aa16.47■□□□□ 0.23
PTPN11-201ENST00000351677 PLD3Q8IV08 490 aa16.47■□□□□ 0.23
PTPN11-201ENST00000351677 B4GALNT2Q8NHY0 566 aa16.47■□□□□ 0.23
PTPN11-201ENST00000351677 MKL1Q969V6 931 aa16.47■□□□□ 0.23
PTPN11-201ENST00000351677 TMEM237Q96Q45 408 aa16.47■□□□□ 0.23
PTPN11-201ENST00000351677 BLOC1S6Q9UL45 172 aa16.47■□□□□ 0.23
PTPN11-201ENST00000351677 VPS26AO75436 327 aa16.47■□□□□ 0.23
PTPN11-201ENST00000351677 ATP6V1G2O95670 118 aa16.47■□□□□ 0.23
PTPN11-201ENST00000351677 MBL2P11226 248 aaPredicted RBP16.47■□□□□ 0.23
PTPN11-201ENST00000351677 SERPINB10P48595 397 aa16.47■□□□□ 0.23
PTPN11-201ENST00000351677 HTR3CQ8WXA8 447 aa16.47■□□□□ 0.23
PTPN11-201ENST00000351677 PPP2R3BQ9Y5P8 575 aa16.47■□□□□ 0.23
PTPN11-201ENST00000351677 E5RJQ4 531 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms