RNA–Protein interactions for RNA: ENST00000348225.6

PTN-201, Transcript of pleiotrophin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTN, Length 1,614 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTN-201ENST00000348225 OTUD1Q5VV17 481 aaPredicted RBP19.44■□□□□ 0.7
PTN-201ENST00000348225 PRSS55Q6UWB4 352 aaPredicted RBP19.44■□□□□ 0.7
PTN-201ENST00000348225 GSPT2Q8IYD1 628 aaKnown RBP19.44■□□□□ 0.7
PTN-201ENST00000348225 COLGALT1Q8NBJ5 622 aa19.44■□□□□ 0.7
PTN-201ENST00000348225 ATAD1Q8NBU5 361 aa19.44■□□□□ 0.7
PTN-201ENST00000348225 FBXO22Q8NEZ5 403 aa19.44■□□□□ 0.7
PTN-201ENST00000348225 SCAMP5Q8TAC9 235 aa19.44■□□□□ 0.7
PTN-201ENST00000348225 FAM71BQ8TC56 605 aa19.44■□□□□ 0.7
PTN-201ENST00000348225 TRAF3IP1Q8TDR0 691 aaPredicted RBP19.44■□□□□ 0.7
PTN-201ENST00000348225 AENQ8WTP8 325 aaKnown RBP19.44■□□□□ 0.7
PTN-201ENST00000348225 SLC9A7Q96T83 725 aa19.44■□□□□ 0.7
PTN-201ENST00000348225 HERC2P3Q9BVR0 1158 aa19.44■□□□□ 0.7
PTN-201ENST00000348225 DHX35Q9H5Z1 703 aaKnown RBP19.44■□□□□ 0.7
PTN-201ENST00000348225 FAM204AQ9H8W3 233 aa19.44■□□□□ 0.7
PTN-201ENST00000348225 GPATCH2LQ9NWQ4 482 aa19.44■□□□□ 0.7
PTN-201ENST00000348225 SPG21Q9NZD8 308 aa19.44■□□□□ 0.7
PTN-201ENST00000348225 CDY1Q9Y6F8 540 aa19.44■□□□□ 0.7
PTN-201ENST00000348225 MYO16Q9Y6X6 1858 aa19.44■□□□□ 0.7
PTN-201ENST00000348225 ALPK3Q96L96 1907 aa19.44■□□□□ 0.7
PTN-201ENST00000348225 LIASO43766 372 aa19.43■□□□□ 0.7
PTN-201ENST00000348225 YWHAGP61981 247 aaKnown RBP eCLIP19.43■□□□□ 0.7
PTN-201ENST00000348225 DYNLT1P63172 113 aa19.43■□□□□ 0.7
PTN-201ENST00000348225 IFRD2Q12894 506 aaPredicted RBP19.43■□□□□ 0.7
PTN-201ENST00000348225 BYSLQ13895 437 aaKnown RBP19.43■□□□□ 0.7
PTN-201ENST00000348225 HLTFQ14527 1009 aaKnown RBP eCLIP19.43■□□□□ 0.7
PTN-201ENST00000348225 DDR2Q16832 855 aa19.43■□□□□ 0.7
PTN-201ENST00000348225 ZC3H12AQ5D1E8 599 aaKnown RBP19.43■□□□□ 0.7
PTN-201ENST00000348225 DUPD1Q68J44 220 aa19.43■□□□□ 0.7
PTN-201ENST00000348225 SLC8B1Q6J4K2 584 aa19.43■□□□□ 0.7
PTN-201ENST00000348225 RSPO2Q6UXX9 243 aaPredicted RBP19.43■□□□□ 0.7
PTN-201ENST00000348225 SND1Q7KZF4 910 aaKnown RBP eCLIP19.43■□□□□ 0.7
PTN-201ENST00000348225 HDXQ7Z353 690 aa19.43■□□□□ 0.7
PTN-201ENST00000348225 FAM131BQ86XD5 332 aa19.43■□□□□ 0.7
PTN-201ENST00000348225 ARHGAP18Q8N392 663 aa19.43■□□□□ 0.7
PTN-201ENST00000348225 VN1R3Q9BXE9 311 aa19.43■□□□□ 0.7
PTN-201ENST00000348225 AAASQ9NRG9 546 aa19.43■□□□□ 0.7
PTN-201ENST00000348225 ABCC13Q9NSE7 274 aa19.43■□□□□ 0.7
PTN-201ENST00000348225 CALCOCO1Q9P1Z2 691 aa19.43■□□□□ 0.7
PTN-201ENST00000348225 NFU1Q9UMS0 254 aa19.43■□□□□ 0.7
PTN-201ENST00000348225 SYNJ2BP-COX16A0A087WUM0 186 aa19.43■□□□□ 0.7
PTN-201ENST00000348225 DAPK3O43293 454 aa19.43■□□□□ 0.7
PTN-201ENST00000348225 PPM1AP35813 382 aa19.43■□□□□ 0.7
PTN-201ENST00000348225 TNNT3P45378 269 aaPredicted RBP19.43■□□□□ 0.7
PTN-201ENST00000348225 GLUD2P49448 558 aa19.43■□□□□ 0.7
PTN-201ENST00000348225 DRG2P55039 364 aaKnown RBP19.43■□□□□ 0.7
PTN-201ENST00000348225 RPL10AP62906 217 aaKnown RBP19.43■□□□□ 0.7
PTN-201ENST00000348225 PITX1P78337 314 aaPredicted RBP19.43■□□□□ 0.7
PTN-201ENST00000348225 KRT17Q04695 432 aa19.43■□□□□ 0.7
PTN-201ENST00000348225 MGAT5BQ3V5L5 792 aa19.43■□□□□ 0.7
PTN-201ENST00000348225 BTBD8Q5XKL5 378 aa19.43■□□□□ 0.7
PTN-201ENST00000348225 PSRC1Q6PGN9 363 aaPredicted RBP19.43■□□□□ 0.7
PTN-201ENST00000348225 RNF19BQ6ZMZ0 732 aa19.43■□□□□ 0.7
PTN-201ENST00000348225 CCDC185Q8N715 623 aa19.43■□□□□ 0.7
PTN-201ENST00000348225 EDEM1Q92611 657 aa19.43■□□□□ 0.7
PTN-201ENST00000348225 BADQ92934 168 aa19.43■□□□□ 0.7
PTN-201ENST00000348225 RNF157Q96PX1 679 aa19.43■□□□□ 0.7
PTN-201ENST00000348225 DPH5Q9H2P9 285 aa19.43■□□□□ 0.7
PTN-201ENST00000348225 DDIT4Q9NX09 232 aa19.43■□□□□ 0.7
PTN-201ENST00000348225 COX16Q9P0S2 106 aa19.43■□□□□ 0.7
PTN-201ENST00000348225 STK39Q9UEW8 545 aa19.43■□□□□ 0.7
PTN-201ENST00000348225 FZD10Q9ULW2 581 aa19.43■□□□□ 0.7
PTN-201ENST00000348225 SCML2Q9UQR0 700 aa19.43■□□□□ 0.7
PTN-201ENST00000348225 PTPRSQ13332 1948 aa19.43■□□□□ 0.7
PTN-201ENST00000348225 PLXNA3P51805 1871 aa19.42■□□□□ 0.7
PTN-201ENST00000348225 APOC4-APOC2K7ER74 178 aa19.42■□□□□ 0.7
PTN-201ENST00000348225 RTN3O95197 1032 aaPredicted RBP19.42■□□□□ 0.7
PTN-201ENST00000348225 APOC2P02655 101 aa19.42■□□□□ 0.7
PTN-201ENST00000348225 HAPLN1P10915 354 aaPredicted RBP19.42■□□□□ 0.7
PTN-201ENST00000348225 VCPP55072 806 aaKnown RBP19.42■□□□□ 0.7
PTN-201ENST00000348225 NNTQ13423 1086 aa19.42■□□□□ 0.7
PTN-201ENST00000348225 CA9Q16790 459 aa19.42■□□□□ 0.7
PTN-201ENST00000348225 PPP6R3Q5H9R7 873 aaPredicted RBP19.42■□□□□ 0.7
PTN-201ENST00000348225 EFHC2Q5JST6 749 aa19.42■□□□□ 0.7
PTN-201ENST00000348225 ZNF365Q70YC5 407 aa19.42■□□□□ 0.7
PTN-201ENST00000348225 NKD2Q969F2 451 aaPredicted RBP19.42■□□□□ 0.7
PTN-201ENST00000348225 CAVIN3Q969G5 261 aa19.42■□□□□ 0.7
PTN-201ENST00000348225 NTAN1Q96AB6 310 aa19.42■□□□□ 0.7
PTN-201ENST00000348225 HAUS1Q96CS2 278 aa19.42■□□□□ 0.7
PTN-201ENST00000348225 SPATA17Q96L03 361 aa19.42■□□□□ 0.7
PTN-201ENST00000348225 SEPT5Q99719 369 aaPredicted RBP19.42■□□□□ 0.7
PTN-201ENST00000348225 TRIM31Q9BZY9 425 aa19.42■□□□□ 0.7
PTN-201ENST00000348225 PIGVQ9NUD9 493 aa19.42■□□□□ 0.7
PTN-201ENST00000348225 TMEM51Q9NW97 253 aa19.42■□□□□ 0.7
PTN-201ENST00000348225 COMMD8Q9NX08 183 aa19.42■□□□□ 0.7
PTN-201ENST00000348225 RCOR3Q9P2K3 495 aaPredicted RBP19.42■□□□□ 0.7
PTN-201ENST00000348225 DRG1Q9Y295 367 aaKnown RBP19.42■□□□□ 0.7
PTN-201ENST00000348225 APOL1O14791 398 aa19.41■□□□□ 0.7
PTN-201ENST00000348225 L1CAMP32004 1257 aa19.41■□□□□ 0.7
PTN-201ENST00000348225 GPR15P49685 360 aa19.41■□□□□ 0.7
PTN-201ENST00000348225 ROR1Q01973 937 aa19.41■□□□□ 0.7
PTN-201ENST00000348225 DSG1Q02413 1049 aa19.41■□□□□ 0.7
PTN-201ENST00000348225 MMRN1Q13201 1228 aa19.41■□□□□ 0.7
PTN-201ENST00000348225 PTK6Q13882 451 aa19.41■□□□□ 0.7
PTN-201ENST00000348225 ARL13BQ3SXY8 428 aa19.41■□□□□ 0.7
PTN-201ENST00000348225 ANKRD20A8PQ5CZ79 823 aa19.41■□□□□ 0.7
PTN-201ENST00000348225 DENND5BQ6ZUT9 1274 aa19.41■□□□□ 0.7
PTN-201ENST00000348225 C16orf59Q7L2K0 433 aa19.41■□□□□ 0.7
PTN-201ENST00000348225 GSTA5Q7RTV2 222 aa19.41■□□□□ 0.7
PTN-201ENST00000348225 DDX53Q86TM3 631 aaKnown RBP19.41■□□□□ 0.7
PTN-201ENST00000348225 FAF2Q96CS3 445 aa19.41■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms