RNA–Protein interactions for RNA: ENST00000341697.7

SEMA6C-201, Transcript of semaphorin 6C, humanhuman

TSL 1 (best)

Gene SEMA6C, Length 5,262 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6C-201ENST00000341697 PCDH9Q9HC56 1237 aa20.22■□□□□ 0.83
SEMA6C-201ENST00000341697 RARGP13631 454 aa20.22■□□□□ 0.83
SEMA6C-201ENST00000341697 PABPC1LQ4VXU2 614 aaKnown RBP20.22■□□□□ 0.83
SEMA6C-201ENST00000341697 TFAP2DQ7Z6R9 452 aa20.22■□□□□ 0.83
SEMA6C-201ENST00000341697 TBC1D13Q9NVG8 400 aa20.22■□□□□ 0.83
SEMA6C-201ENST00000341697 THG1LQ9NWX6 298 aaKnown RBP20.22■□□□□ 0.83
SEMA6C-201ENST00000341697 CRTAMO95727 393 aa20.21■□□□□ 0.83
SEMA6C-201ENST00000341697 DARSP14868 501 aaKnown RBP20.21■□□□□ 0.83
SEMA6C-201ENST00000341697 GRIK3Q13003 919 aa20.21■□□□□ 0.83
SEMA6C-201ENST00000341697 MFSD14AQ96MC6 490 aa20.21■□□□□ 0.83
SEMA6C-201ENST00000341697 SLC7A5P2Q9GIP4 190 aa20.21■□□□□ 0.83
SEMA6C-201ENST00000341697 TRMT6Q9UJA5 497 aaKnown RBP20.21■□□□□ 0.83
SEMA6C-201ENST00000341697 SOWAHBA6NEL2 793 aa20.21■□□□□ 0.83
SEMA6C-201ENST00000341697 TOMM70O94826 608 aa20.21■□□□□ 0.83
SEMA6C-201ENST00000341697 NR2C2P49116 596 aa20.21■□□□□ 0.83
SEMA6C-201ENST00000341697 ZNF135P52742 658 aaPredicted RBP20.21■□□□□ 0.83
SEMA6C-201ENST00000341697 WDR93Q6P2C0 686 aa20.21■□□□□ 0.83
SEMA6C-201ENST00000341697 ARL8AQ96BM9 186 aa20.21■□□□□ 0.83
SEMA6C-201ENST00000341697 UBE2OQ9C0C9 1292 aaKnown RBP20.21■□□□□ 0.83
SEMA6C-201ENST00000341697 WEE1P30291 646 aa20.21■□□□□ 0.83
SEMA6C-201ENST00000341697 NOS2P35228 1153 aa20.21■□□□□ 0.83
SEMA6C-201ENST00000341697 CLK2P49760 499 aaKnown RBP20.21■□□□□ 0.83
SEMA6C-201ENST00000341697 LRRC52Q8N7C0 313 aa20.21■□□□□ 0.83
SEMA6C-201ENST00000341697 APOL2Q9BQE5 337 aa20.21■□□□□ 0.83
SEMA6C-201ENST00000341697 APOL5Q9BWW9 433 aa20.21■□□□□ 0.83
SEMA6C-201ENST00000341697 DCLK3Q9C098 648 aa20.21■□□□□ 0.83
SEMA6C-201ENST00000341697 ARL2BPQ9Y2Y0 163 aa20.21■□□□□ 0.83
SEMA6C-201ENST00000341697 IGLV3-22A0A075B6J6 115 aa20.21■□□□□ 0.83
SEMA6C-201ENST00000341697 NUMBP49757 651 aa20.21■□□□□ 0.83
SEMA6C-201ENST00000341697 SCNN1BP51168 640 aa20.21■□□□□ 0.83
SEMA6C-201ENST00000341697 RENBPP51606 427 aa20.21■□□□□ 0.83
SEMA6C-201ENST00000341697 KCNMA1Q12791 1236 aa20.21■□□□□ 0.83
SEMA6C-201ENST00000341697 B3GALNT2Q8NCR0 500 aa20.21■□□□□ 0.83
SEMA6C-201ENST00000341697 XPO6Q96QU8 1125 aaKnown RBP20.21■□□□□ 0.83
SEMA6C-201ENST00000341697 GANQ9H2C0 597 aa20.21■□□□□ 0.83
SEMA6C-201ENST00000341697 SRP72O76094 671 aaKnown RBP20.2■□□□□ 0.82
SEMA6C-201ENST00000341697 AMPD1P23109 780 aa20.2■□□□□ 0.82
SEMA6C-201ENST00000341697 PTK2BQ14289 1009 aa20.2■□□□□ 0.82
SEMA6C-201ENST00000341697 C1orf146Q5VVC0 180 aa20.2■□□□□ 0.82
SEMA6C-201ENST00000341697 DCLRE1AQ6PJP8 1040 aa20.2■□□□□ 0.82
SEMA6C-201ENST00000341697 MFSD7Q6UXD7 560 aa20.2■□□□□ 0.82
SEMA6C-201ENST00000341697 ANKS3Q6ZW76 656 aa20.2■□□□□ 0.82
SEMA6C-201ENST00000341697 NT5DC3Q86UY8 548 aa20.2■□□□□ 0.82
SEMA6C-201ENST00000341697 SHC3Q92529 594 aa20.2■□□□□ 0.82
SEMA6C-201ENST00000341697 PPFIA2O75334 1257 aa20.2■□□□□ 0.82
SEMA6C-201ENST00000341697 LMNAP02545 664 aaKnown RBP20.2■□□□□ 0.82
SEMA6C-201ENST00000341697 PYGMP11217 842 aa20.2■□□□□ 0.82
SEMA6C-201ENST00000341697 SPDYAQ5MJ70 313 aa20.2■□□□□ 0.82
SEMA6C-201ENST00000341697 LVRNQ6Q4G3 990 aa20.2■□□□□ 0.82
SEMA6C-201ENST00000341697 SLAIN1Q8ND83 568 aa20.2■□□□□ 0.82
SEMA6C-201ENST00000341697 CCDC124Q96CT7 223 aaKnown RBP20.2■□□□□ 0.82
SEMA6C-201ENST00000341697 CES2O00748 559 aa20.2■□□□□ 0.82
SEMA6C-201ENST00000341697 CCDC149Q6ZUS6 474 aa20.2■□□□□ 0.82
SEMA6C-201ENST00000341697 FBXO25Q8TCJ0 367 aa20.2■□□□□ 0.82
SEMA6C-201ENST00000341697 PNKPQ96T60 521 aa20.2■□□□□ 0.82
SEMA6C-201ENST00000341697 TRIM45Q9H8W5 580 aaPredicted RBP20.2■□□□□ 0.82
SEMA6C-201ENST00000341697 ATP13A1Q9HD20 1204 aa20.2■□□□□ 0.82
SEMA6C-201ENST00000341697 SIGLEC16A6NMB1 481 aa20.2■□□□□ 0.82
SEMA6C-201ENST00000341697 KDM1AO60341 852 aa20.2■□□□□ 0.82
SEMA6C-201ENST00000341697 ZNF467Q7Z7K2 595 aaPredicted RBP20.2■□□□□ 0.82
SEMA6C-201ENST00000341697 NKX2-3Q8TAU0 364 aa20.2■□□□□ 0.82
SEMA6C-201ENST00000341697 WNT8BQ93098 351 aa20.2■□□□□ 0.82
SEMA6C-201ENST00000341697 ETNK1Q9HBU6 452 aa20.2■□□□□ 0.82
SEMA6C-201ENST00000341697 ZNF214Q9UL59 606 aaPredicted RBP20.2■□□□□ 0.82
SEMA6C-201ENST00000341697 MAFBQ9Y5Q3 323 aaPredicted RBP20.2■□□□□ 0.82
SEMA6C-201ENST00000341697 A0A0B4J269 797 aa20.19■□□□□ 0.82
SEMA6C-201ENST00000341697 TIMM44O43615 452 aa20.19■□□□□ 0.82
SEMA6C-201ENST00000341697 TSPAN3O60637 253 aa20.19■□□□□ 0.82
SEMA6C-201ENST00000341697 SERPINF2P08697 491 aa20.19■□□□□ 0.82
SEMA6C-201ENST00000341697 ARHGDIAP52565 204 aa20.19■□□□□ 0.82
SEMA6C-201ENST00000341697 SNX31Q8N9S9 440 aa20.19■□□□□ 0.82
SEMA6C-201ENST00000341697 PPP1R36Q96LQ0 422 aa20.19■□□□□ 0.82
SEMA6C-201ENST00000341697 TKTL2Q9H0I9 626 aa20.19■□□□□ 0.82
SEMA6C-201ENST00000341697 DERAQ9Y315 318 aa20.19■□□□□ 0.82
SEMA6C-201ENST00000341697 GJB6O95452 261 aa20.19■□□□□ 0.82
SEMA6C-201ENST00000341697 SERPIND1P05546 499 aa20.19■□□□□ 0.82
SEMA6C-201ENST00000341697 YBX3P16989 372 aaKnown RBP eCLIP20.19■□□□□ 0.82
SEMA6C-201ENST00000341697 GRAMD1BQ3KR37 738 aa20.19■□□□□ 0.82
SEMA6C-201ENST00000341697 PALB2Q86YC2 1186 aa20.19■□□□□ 0.82
SEMA6C-201ENST00000341697 LGI2Q8N0V4 545 aa20.19■□□□□ 0.82
SEMA6C-201ENST00000341697 FAM167BQ9BTA0 163 aa20.19■□□□□ 0.82
SEMA6C-201ENST00000341697 EPN3Q9H201 632 aa20.19■□□□□ 0.82
SEMA6C-201ENST00000341697 MARCH2Q9P0N8 246 aa20.19■□□□□ 0.82
SEMA6C-201ENST00000341697 APOA4P06727 396 aa20.19■□□□□ 0.82
SEMA6C-201ENST00000341697 ITGALP20701 1170 aa20.19■□□□□ 0.82
SEMA6C-201ENST00000341697 ABCE1P61221 599 aaKnown RBP20.19■□□□□ 0.82
SEMA6C-201ENST00000341697 CREMQ03060 361 aa20.19■□□□□ 0.82
SEMA6C-201ENST00000341697 FIBCD1Q8N539 461 aa20.19■□□□□ 0.82
SEMA6C-201ENST00000341697 SPATA20Q8TB22 786 aa20.19■□□□□ 0.82
SEMA6C-201ENST00000341697 PKD2L2Q9NZM6 624 aa20.19■□□□□ 0.82
SEMA6C-201ENST00000341697 ARHGAP10A1A4S6 786 aa20.19■□□□□ 0.82
SEMA6C-201ENST00000341697 PYGBP11216 843 aa20.19■□□□□ 0.82
SEMA6C-201ENST00000341697 MIPOL1Q8TD10 442 aa20.19■□□□□ 0.82
SEMA6C-201ENST00000341697 PRR23AA6NEV1 266 aa20.18■□□□□ 0.82
SEMA6C-201ENST00000341697 SOAT2O75908 522 aa20.18■□□□□ 0.82
SEMA6C-201ENST00000341697 DMTNQ08495 405 aa20.18■□□□□ 0.82
SEMA6C-201ENST00000341697 ZNF284Q2VY69 593 aa20.18■□□□□ 0.82
SEMA6C-201ENST00000341697 AGAP9Q5VTM2 703 aa20.18■□□□□ 0.82
SEMA6C-201ENST00000341697 ANKRD52Q8NB46 1076 aa20.18■□□□□ 0.82
SEMA6C-201ENST00000341697 SLC26A7Q8TE54 656 aa20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms