RNA–Protein interactions for RNA: ENST00000339844.6

ZNF28-201, Transcript of zinc finger protein 28, humanhuman

TSL 4 BASIC

Gene ZNF28, Length 650 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF28-201ENST00000339844 ASIC3Q9UHC3 531 aa6.64□□□□□ -1.35
ZNF28-201ENST00000339844 CORO1CQ9ULV4 474 aaPredicted RBP6.64□□□□□ -1.35
ZNF28-201ENST00000339844 ST3GAL5Q9UNP4 418 aa6.64□□□□□ -1.35
ZNF28-201ENST00000339844 CNTN6Q9UQ52 1028 aa6.64□□□□□ -1.35
ZNF28-201ENST00000339844 YBX2Q9Y2T7 364 aaKnown RBP6.64□□□□□ -1.35
ZNF28-201ENST00000339844 SQORQ9Y6N5 450 aa6.64□□□□□ -1.35
ZNF28-201ENST00000339844 PTPRSQ13332 1948 aa6.64□□□□□ -1.35
ZNF28-201ENST00000339844 HSFX4A0A1B0GTS1 333 aaPredicted RBP6.63□□□□□ -1.35
ZNF28-201ENST00000339844 HSFX3A0A1B0GWH4 333 aaPredicted RBP6.63□□□□□ -1.35
ZNF28-201ENST00000339844 LCHNA4D1U4 455 aa6.63□□□□□ -1.35
ZNF28-201ENST00000339844 ENPP3O14638 875 aa6.63□□□□□ -1.35
ZNF28-201ENST00000339844 DNALI1O14645 258 aaPredicted RBP6.63□□□□□ -1.35
ZNF28-201ENST00000339844 CLDN3O15551 220 aa6.63□□□□□ -1.35
ZNF28-201ENST00000339844 GAS2O43903 313 aaKnown RBP6.63□□□□□ -1.35
ZNF28-201ENST00000339844 LRRN2O75325 713 aa6.63□□□□□ -1.35
ZNF28-201ENST00000339844 ZWINTO95229 277 aa6.63□□□□□ -1.35
ZNF28-201ENST00000339844 IL1BP01584 269 aa6.63□□□□□ -1.35
ZNF28-201ENST00000339844 CALB2P22676 271 aa6.63□□□□□ -1.35
ZNF28-201ENST00000339844 KLRC2P26717 231 aa6.63□□□□□ -1.35
ZNF28-201ENST00000339844 WEE1P30291 646 aa6.63□□□□□ -1.35
ZNF28-201ENST00000339844 ADSSP30520 456 aa6.63□□□□□ -1.35
ZNF28-201ENST00000339844 PHKA2P46019 1235 aa6.63□□□□□ -1.35
ZNF28-201ENST00000339844 KCNJ1P48048 391 aa6.63□□□□□ -1.35
ZNF28-201ENST00000339844 IRX1P78414 480 aaPredicted RBP6.63□□□□□ -1.35
ZNF28-201ENST00000339844 SMAD3P84022 425 aaKnown RBP6.63□□□□□ -1.35
ZNF28-201ENST00000339844 CDK18Q07002 472 aa6.63□□□□□ -1.35
ZNF28-201ENST00000339844 DSC3Q14574 896 aa6.63□□□□□ -1.35
ZNF28-201ENST00000339844 MORF4L2Q15014 288 aa6.63□□□□□ -1.35
ZNF28-201ENST00000339844 ZRSR2Q15696 482 aaKnown RBP6.63□□□□□ -1.35
ZNF28-201ENST00000339844 SNRNP35Q16560 246 aaKnown RBP6.63□□□□□ -1.35
ZNF28-201ENST00000339844 PDK4Q16654 411 aa6.63□□□□□ -1.35
ZNF28-201ENST00000339844 LONRF1Q17RB8 773 aa6.63□□□□□ -1.35
ZNF28-201ENST00000339844 WDR44Q5JSH3 913 aa6.63□□□□□ -1.35
ZNF28-201ENST00000339844 FAM102BQ5T8I3 360 aa6.63□□□□□ -1.35
ZNF28-201ENST00000339844 PLEKHA7Q6IQ23 1121 aa6.63□□□□□ -1.35
ZNF28-201ENST00000339844 FAM117BQ6P1L5 589 aa6.63□□□□□ -1.35
ZNF28-201ENST00000339844 C15orf39Q6ZRI6 1047 aa6.63□□□□□ -1.35
ZNF28-201ENST00000339844 TAS1R3Q7RTX0 852 aa6.63□□□□□ -1.35
ZNF28-201ENST00000339844 TRIM46Q7Z4K8 759 aa6.63□□□□□ -1.35
ZNF28-201ENST00000339844 APBB1IPQ7Z5R6 666 aaPredicted RBP6.63□□□□□ -1.35
ZNF28-201ENST00000339844 ADAT2Q7Z6V5 191 aaKnown RBP6.63□□□□□ -1.35
ZNF28-201ENST00000339844 TRABD2AQ86V40 505 aa6.63□□□□□ -1.35
ZNF28-201ENST00000339844 ZNF410Q86VK4 478 aa6.63□□□□□ -1.35
ZNF28-201ENST00000339844 CCDC25Q86WR0 208 aa6.63□□□□□ -1.35
ZNF28-201ENST00000339844 PHF13Q86YI8 300 aaPredicted RBP6.63□□□□□ -1.35
ZNF28-201ENST00000339844 HERC6Q8IVU3 1022 aa6.63□□□□□ -1.35
ZNF28-201ENST00000339844 EXOC8Q8IYI6 725 aa6.63□□□□□ -1.35
ZNF28-201ENST00000339844 PPM1KQ8N3J5 372 aa6.63□□□□□ -1.35
ZNF28-201ENST00000339844 FITM2Q8N6M3 262 aa6.63□□□□□ -1.35
ZNF28-201ENST00000339844 ENDOVQ8N8Q3 282 aaKnown RBP6.63□□□□□ -1.35
ZNF28-201ENST00000339844 RNF149Q8NC42 400 aa6.63□□□□□ -1.35
ZNF28-201ENST00000339844 TMEM161BQ8NDZ6 487 aa6.63□□□□□ -1.35
ZNF28-201ENST00000339844 MCPH1Q8NEM0 835 aa6.63□□□□□ -1.35
ZNF28-201ENST00000339844 NSMCE1Q8WV22 266 aa6.63□□□□□ -1.35
ZNF28-201ENST00000339844 APBB2Q92870 758 aa6.63□□□□□ -1.35
ZNF28-201ENST00000339844 SLC9A7Q96T83 725 aa6.63□□□□□ -1.35
ZNF28-201ENST00000339844 GCOM2Q9BZD3 368 aaPredicted RBP6.63□□□□□ -1.35
ZNF28-201ENST00000339844 TRIM6Q9C030 488 aaPredicted RBP6.63□□□□□ -1.35
ZNF28-201ENST00000339844 ZNF518BQ9C0D4 1074 aa6.63□□□□□ -1.35
ZNF28-201ENST00000339844 VPS11Q9H270 941 aa6.63□□□□□ -1.35
ZNF28-201ENST00000339844 LRMDAQ9H2I8 198 aa6.63□□□□□ -1.35
ZNF28-201ENST00000339844 MTIF3Q9H2K0 278 aaKnown RBP6.63□□□□□ -1.35
ZNF28-201ENST00000339844 PCIF1Q9H4Z3 704 aa6.63□□□□□ -1.35
ZNF28-201ENST00000339844 LRRC4CQ9HCJ2 640 aa6.63□□□□□ -1.35
ZNF28-201ENST00000339844 ABCF3Q9NUQ8 709 aa6.63□□□□□ -1.35
ZNF28-201ENST00000339844 DDX56Q9NY93 547 aaKnown RBP6.63□□□□□ -1.35
ZNF28-201ENST00000339844 IP6K2Q9UHH9 426 aa6.63□□□□□ -1.35
ZNF28-201ENST00000339844 LNPEPQ9UIQ6 1025 aa6.63□□□□□ -1.35
ZNF28-201ENST00000339844 TBX20Q9UMR3 447 aa6.63□□□□□ -1.35
ZNF28-201ENST00000339844 CDH23Q9H251 3354 aa6.63□□□□□ -1.35
ZNF28-201ENST00000339844 TTC3P53804 2025 aa6.62□□□□□ -1.35
ZNF28-201ENST00000339844 TCRBV7S2A1N4TA0A589 114 aa6.62□□□□□ -1.35
ZNF28-201ENST00000339844 A6NHS1 94 aa6.62□□□□□ -1.35
ZNF28-201ENST00000339844 TMEM110-MUSTN1A8MSY1 372 aa6.62□□□□□ -1.35
ZNF28-201ENST00000339844 RASA4BC9J798 803 aa6.62□□□□□ -1.35
ZNF28-201ENST00000339844 ANKRD63C9JTQ0 380 aa6.62□□□□□ -1.35
ZNF28-201ENST00000339844 C2CD2LO14523 706 aa6.62□□□□□ -1.35
ZNF28-201ENST00000339844 PPP1R12AO14974 1030 aaPredicted RBP6.62□□□□□ -1.35
ZNF28-201ENST00000339844 GPR182O15218 404 aa6.62□□□□□ -1.35
ZNF28-201ENST00000339844 TM9SF1O15321 606 aa6.62□□□□□ -1.35
ZNF28-201ENST00000339844 RASA4O43374 803 aa6.62□□□□□ -1.35
ZNF28-201ENST00000339844 EXTL3O43909 919 aa6.62□□□□□ -1.35
ZNF28-201ENST00000339844 EFCAB14O75071 495 aa6.62□□□□□ -1.35
ZNF28-201ENST00000339844 ATP2C2O75185 946 aa6.62□□□□□ -1.35
ZNF28-201ENST00000339844 TJP3O95049 919 aa6.62□□□□□ -1.35
ZNF28-201ENST00000339844 GJB5O95377 273 aa6.62□□□□□ -1.35
ZNF28-201ENST00000339844 TGDSO95455 350 aa6.62□□□□□ -1.35
ZNF28-201ENST00000339844 AMHP03971 560 aa6.62□□□□□ -1.35
ZNF28-201ENST00000339844 EDN1P05305 212 aa6.62□□□□□ -1.35
ZNF28-201ENST00000339844 GNAZP19086 355 aa6.62□□□□□ -1.35
ZNF28-201ENST00000339844 IBSPP21815 317 aaPredicted RBP6.62□□□□□ -1.35
ZNF28-201ENST00000339844 TBXAS1P24557 533 aaPredicted RBP6.62□□□□□ -1.35
ZNF28-201ENST00000339844 PTPN4P29074 926 aa6.62□□□□□ -1.35
ZNF28-201ENST00000339844 PHBP35232 272 aa6.62□□□□□ -1.35
ZNF28-201ENST00000339844 NSFP46459 744 aaKnown RBP6.62□□□□□ -1.35
ZNF28-201ENST00000339844 IFNAR2P48551 515 aa6.62□□□□□ -1.35
ZNF28-201ENST00000339844 MARCKSL1P49006 195 aa6.62□□□□□ -1.35
ZNF28-201ENST00000339844 GATMP50440 423 aa6.62□□□□□ -1.35
ZNF28-201ENST00000339844 EPHA4P54764 986 aa6.62□□□□□ -1.35
ZNF28-201ENST00000339844 DLG4P78352 724 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms