RNA–Protein interactions for RNA: ENST00000338399.8

CDK5RAP3-201, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5RAP3, Length 1,866 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-201ENST00000338399 GOLGA6L10A0A0M3HER8 536 aa15.37■□□□□ 0.05
CDK5RAP3-201ENST00000338399 SLC38A8A6NNN8 435 aa15.37■□□□□ 0.05
CDK5RAP3-201ENST00000338399 CSPG5O95196 566 aa15.37■□□□□ 0.05
CDK5RAP3-201ENST00000338399 CXCL14O95715 111 aa15.37■□□□□ 0.05
CDK5RAP3-201ENST00000338399 RDXP35241 583 aaKnown RBP15.37■□□□□ 0.05
CDK5RAP3-201ENST00000338399 CDKN2BP42772 138 aa15.37■□□□□ 0.05
CDK5RAP3-201ENST00000338399 CDH6P55285 790 aa15.37■□□□□ 0.05
CDK5RAP3-201ENST00000338399 SIX1Q15475 284 aaPredicted RBP15.37■□□□□ 0.05
CDK5RAP3-201ENST00000338399 TFDP3Q5H9I0 405 aa15.37■□□□□ 0.05
CDK5RAP3-201ENST00000338399 ERMARDQ5T6L9 678 aa15.37■□□□□ 0.05
CDK5RAP3-201ENST00000338399 BEND5Q7L4P6 421 aa15.37■□□□□ 0.05
CDK5RAP3-201ENST00000338399 MON1AQ86VX9 555 aa15.37■□□□□ 0.05
CDK5RAP3-201ENST00000338399 CCDC185Q8N715 623 aa15.37■□□□□ 0.05
CDK5RAP3-201ENST00000338399 TEKT4Q8WW24 435 aa15.37■□□□□ 0.05
CDK5RAP3-201ENST00000338399 FBXO32Q969P5 355 aa15.37■□□□□ 0.05
CDK5RAP3-201ENST00000338399 LRRC1Q9BTT6 524 aa15.37■□□□□ 0.05
CDK5RAP3-201ENST00000338399 TRIM62Q9BVG3 475 aa15.37■□□□□ 0.05
CDK5RAP3-201ENST00000338399 FAM204AQ9H8W3 233 aa15.37■□□□□ 0.05
CDK5RAP3-201ENST00000338399 PIGVQ9NUD9 493 aa15.37■□□□□ 0.05
CDK5RAP3-201ENST00000338399 OSER1Q9NX31 292 aa15.37■□□□□ 0.05
CDK5RAP3-201ENST00000338399 GMIPQ9P107 970 aa15.37■□□□□ 0.05
CDK5RAP3-201ENST00000338399 MTUS1Q9ULD2 1270 aa15.37■□□□□ 0.05
CDK5RAP3-201ENST00000338399 MAGED2Q9UNF1 606 aaPredicted RBP15.37■□□□□ 0.05
CDK5RAP3-201ENST00000338399 hCG_1818297A0A087WSY0 165 aa15.36■□□□□ 0.05
CDK5RAP3-201ENST00000338399 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP15.36■□□□□ 0.05
CDK5RAP3-201ENST00000338399 FAM92AA1XBS5 289 aa15.36■□□□□ 0.05
CDK5RAP3-201ENST00000338399 MDM4O15151 490 aa15.36■□□□□ 0.05
CDK5RAP3-201ENST00000338399 CNPP09543 421 aaKnown RBP15.36■□□□□ 0.05
CDK5RAP3-201ENST00000338399 ERVFC1P60507 584 aa15.36■□□□□ 0.05
CDK5RAP3-201ENST00000338399 CREMQ03060 361 aa15.36■□□□□ 0.05
CDK5RAP3-201ENST00000338399 ADCY2Q08462 1091 aa15.36■□□□□ 0.05
CDK5RAP3-201ENST00000338399 KLF1Q13351 362 aaPredicted RBP15.36■□□□□ 0.05
CDK5RAP3-201ENST00000338399 CA9Q16790 459 aa15.36■□□□□ 0.05
CDK5RAP3-201ENST00000338399 PRELID2Q8N945 189 aa15.36■□□□□ 0.05
CDK5RAP3-201ENST00000338399 DQX1Q8TE96 717 aaKnown RBP15.36■□□□□ 0.05
CDK5RAP3-201ENST00000338399 CALN1Q9BXU9 219 aa15.36■□□□□ 0.05
CDK5RAP3-201ENST00000338399 ANKZF1Q9H8Y5 726 aa15.36■□□□□ 0.05
CDK5RAP3-201ENST00000338399 COMMD8Q9NX08 183 aa15.36■□□□□ 0.05
CDK5RAP3-201ENST00000338399 DDIT4Q9NX09 232 aa15.36■□□□□ 0.05
CDK5RAP3-201ENST00000338399 HSFX1Q9UBD0 423 aa15.36■□□□□ 0.05
CDK5RAP3-201ENST00000338399 NUDT5Q9UKK9 219 aa15.36■□□□□ 0.05
CDK5RAP3-201ENST00000338399 RWDD3Q9Y3V2 267 aa15.36■□□□□ 0.05
CDK5RAP3-201ENST00000338399 ELF1P32519 619 aa15.35■□□□□ 0.05
CDK5RAP3-201ENST00000338399 PTPN7P35236 360 aa15.35■□□□□ 0.05
CDK5RAP3-201ENST00000338399 ARSEP51690 589 aa15.35■□□□□ 0.05
CDK5RAP3-201ENST00000338399 TAF10Q12962 218 aa15.35■□□□□ 0.05
CDK5RAP3-201ENST00000338399 KRT81Q14533 505 aa15.35■□□□□ 0.05
CDK5RAP3-201ENST00000338399 PPP2R5EQ16537 467 aa15.35■□□□□ 0.05
CDK5RAP3-201ENST00000338399 C8orf74Q6P047 294 aa15.35■□□□□ 0.05
CDK5RAP3-201ENST00000338399 TAC4Q86UU9 113 aa15.35■□□□□ 0.05
CDK5RAP3-201ENST00000338399 GPR161Q8N6U8 529 aaKnown RBP15.35■□□□□ 0.05
CDK5RAP3-201ENST00000338399 SPPL3Q8TCT6 385 aa15.35■□□□□ 0.05
CDK5RAP3-201ENST00000338399 POF1BQ8WVV4 589 aa15.35■□□□□ 0.05
CDK5RAP3-201ENST00000338399 MAIP1Q8WWC4 291 aa15.35■□□□□ 0.05
CDK5RAP3-201ENST00000338399 PGAP3Q96FM1 320 aaPredicted RBP15.35■□□□□ 0.05
CDK5RAP3-201ENST00000338399 TCF25Q9BQ70 676 aa15.35■□□□□ 0.05
CDK5RAP3-201ENST00000338399 MAGEB5Q9BZ81 275 aa15.35■□□□□ 0.05
CDK5RAP3-201ENST00000338399 WDR6Q9NNW5 1121 aaKnown RBP15.35■□□□□ 0.05
CDK5RAP3-201ENST00000338399 ENTPD7Q9NQZ7 604 aa15.35■□□□□ 0.05
CDK5RAP3-201ENST00000338399 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.35■□□□□ 0.05
CDK5RAP3-201ENST00000338399 AP4E1Q9UPM8 1137 aa15.35■□□□□ 0.05
CDK5RAP3-201ENST00000338399 LZTS1Q9Y250 596 aa15.35■□□□□ 0.05
CDK5RAP3-201ENST00000338399 PRRG1O14668 218 aa15.35■□□□□ 0.05
CDK5RAP3-201ENST00000338399 CA3P07451 260 aa15.35■□□□□ 0.05
CDK5RAP3-201ENST00000338399 SPATA31D3P0C874 917 aa15.35■□□□□ 0.05
CDK5RAP3-201ENST00000338399 DNAJB1P25685 340 aa15.35■□□□□ 0.05
CDK5RAP3-201ENST00000338399 ALDH1A3P47895 512 aa15.35■□□□□ 0.05
CDK5RAP3-201ENST00000338399 MMRN1Q13201 1228 aa15.35■□□□□ 0.05
CDK5RAP3-201ENST00000338399 DPYSL3Q14195 570 aa15.35■□□□□ 0.05
CDK5RAP3-201ENST00000338399 TAZQ16635 292 aa15.35■□□□□ 0.05
CDK5RAP3-201ENST00000338399 CCDC70Q6NSX1 233 aa15.35■□□□□ 0.05
CDK5RAP3-201ENST00000338399 SPATA31D4Q6ZUB0 917 aa15.35■□□□□ 0.05
CDK5RAP3-201ENST00000338399 ARHGAP18Q8N392 663 aa15.35■□□□□ 0.05
CDK5RAP3-201ENST00000338399 HDAC7Q8WUI4 952 aa15.35■□□□□ 0.05
CDK5RAP3-201ENST00000338399 C1orf54Q8WWF1 131 aa15.35■□□□□ 0.05
CDK5RAP3-201ENST00000338399 MAGOHBQ96A72 148 aaKnown RBP15.35■□□□□ 0.05
CDK5RAP3-201ENST00000338399 PLEKHA4Q9H4M7 779 aa15.35■□□□□ 0.05
CDK5RAP3-201ENST00000338399 DHX35Q9H5Z1 703 aaKnown RBP15.35■□□□□ 0.05
CDK5RAP3-201ENST00000338399 TMPRSS4Q9NRS4 437 aa15.35■□□□□ 0.05
CDK5RAP3-201ENST00000338399 SFMBT1Q9UHJ3 866 aa15.35■□□□□ 0.05
CDK5RAP3-201ENST00000338399 FZD10Q9ULW2 581 aa15.35■□□□□ 0.05
CDK5RAP3-201ENST00000338399 YIPF1Q9Y548 306 aa15.35■□□□□ 0.05
CDK5RAP3-201ENST00000338399 DYNC1I1O14576 645 aa15.34■□□□□ 0.05
CDK5RAP3-201ENST00000338399 PHF2O75151 1096 aa15.34■□□□□ 0.05
CDK5RAP3-201ENST00000338399 TJP3O95049 919 aa15.34■□□□□ 0.05
CDK5RAP3-201ENST00000338399 F9P00740 461 aa15.34■□□□□ 0.05
CDK5RAP3-201ENST00000338399 SLC7A5Q01650 507 aa15.34■□□□□ 0.05
CDK5RAP3-201ENST00000338399 PDK2Q15119 407 aa15.34■□□□□ 0.05
CDK5RAP3-201ENST00000338399 PPP6R3Q5H9R7 873 aaPredicted RBP15.34■□□□□ 0.05
CDK5RAP3-201ENST00000338399 PLPP4Q5VZY2 271 aa15.34■□□□□ 0.05
CDK5RAP3-201ENST00000338399 RFX6Q8HWS3 928 aa15.34■□□□□ 0.05
CDK5RAP3-201ENST00000338399 MAP7D3Q8IWC1 876 aa15.34■□□□□ 0.05
CDK5RAP3-201ENST00000338399 TCEAL8Q8IYN2 117 aa15.34■□□□□ 0.05
CDK5RAP3-201ENST00000338399 RNF139Q8WU17 664 aa15.34■□□□□ 0.05
CDK5RAP3-201ENST00000338399 CASP10Q92851 521 aa15.34■□□□□ 0.05
CDK5RAP3-201ENST00000338399 CEP295NLQ96MC4 621 aa15.34■□□□□ 0.05
CDK5RAP3-201ENST00000338399 KLHL5Q96PQ7 755 aa15.34■□□□□ 0.05
CDK5RAP3-201ENST00000338399 HINFPQ9BQA5 517 aa15.34■□□□□ 0.05
CDK5RAP3-201ENST00000338399 PCDH18Q9HCL0 1135 aa15.34■□□□□ 0.05
CDK5RAP3-201ENST00000338399 TLR8Q9NR97 1041 aaKnown RBP15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms